RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DEFB130AP0DP74 79 aa-1.42□□□□□ -2.64
ECHDC1-201ENST00000368287 MT1EP04732 61 aa-1.43□□□□□ -2.64
ECHDC1-201ENST00000368287 CLPSL2Q6UWE3 100 aa-1.43□□□□□ -2.64
ECHDC1-201ENST00000368287 DEFB106AQ8N104 65 aa-1.43□□□□□ -2.64
ECHDC1-201ENST00000368287 BPTFQ12830 3046 aa-1.43□□□□□ -2.64
ECHDC1-201ENST00000368287 LRBAP50851 2863 aa-1.44□□□□□ -2.64
ECHDC1-201ENST00000368287 LYNX1G3V0Z9 82 aa-1.44□□□□□ -2.64
ECHDC1-201ENST00000368287 IFI27P40305 119 aaPredicted RBP-1.44□□□□□ -2.64
ECHDC1-201ENST00000368287 NDUFA4O00483 81 aa-1.45□□□□□ -2.64
ECHDC1-201ENST00000368287 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.46□□□□□ -2.64
ECHDC1-201ENST00000368287 IAPPP10997 89 aa-1.47□□□□□ -2.64
ECHDC1-201ENST00000368287 MT1LQ93083 61 aa-1.47□□□□□ -2.64
ECHDC1-201ENST00000368287 RICTORQ6R327 1708 aa-1.47□□□□□ -2.64
ECHDC1-201ENST00000368287 CSMD1Q96PZ7 3565 aa-1.47□□□□□ -2.65
ECHDC1-201ENST00000368287 SPTAN1Q13813 2472 aaKnown RBP-1.47□□□□□ -2.65
ECHDC1-201ENST00000368287 NREPQ16612 68 aa-1.48□□□□□ -2.65
ECHDC1-201ENST00000368287 TRRAPQ9Y4A5 3859 aa-1.48□□□□□ -2.65
ECHDC1-201ENST00000368287 MMP24-AS1A0A0U1RRL7 71 aa-1.49□□□□□ -2.65
ECHDC1-201ENST00000368287 TNP1P09430 55 aa-1.49□□□□□ -2.65
ECHDC1-201ENST00000368287 KRTAP8-1Q8IUC2 63 aa-1.49□□□□□ -2.65
ECHDC1-201ENST00000368287 CFAP43Q8NDM7 1665 aa-1.49□□□□□ -2.65
ECHDC1-201ENST00000368287 TJP1Q07157 1748 aa-1.5□□□□□ -2.65
ECHDC1-201ENST00000368287 ITSN1Q15811 1721 aa-1.5□□□□□ -2.65
ECHDC1-201ENST00000368287 CCDC88BA6NC98 1476 aa-1.5□□□□□ -2.65
ECHDC1-201ENST00000368287 CFAP46Q8IYW2 2715 aa-1.51□□□□□ -2.65
ECHDC1-201ENST00000368287 ANKRD36CQ5JPF3 1778 aa-1.51□□□□□ -2.65
ECHDC1-201ENST00000368287 KANTRA0A1W2PQU2 76 aa-1.51□□□□□ -2.65
ECHDC1-201ENST00000368287 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.51□□□□□ -2.65
ECHDC1-201ENST00000368287 SPTBN5Q9NRC6 3674 aaKnown RBP-1.51□□□□□ -2.65
ECHDC1-201ENST00000368287 CDC42BPAQ5VT25 1732 aa-1.52□□□□□ -2.65
ECHDC1-201ENST00000368287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.52□□□□□ -2.65
ECHDC1-201ENST00000368287 EYSQ5T1H1 3165 aa-1.52□□□□□ -2.65
ECHDC1-201ENST00000368287 MT1GP13640 62 aa-1.54□□□□□ -2.66
ECHDC1-201ENST00000368287 SPENQ96T58 3664 aaKnown RBP-1.55□□□□□ -2.66
ECHDC1-201ENST00000368287 UACAQ9BZF9 1416 aa-1.55□□□□□ -2.66
ECHDC1-201ENST00000368287 IGLV5-48A0A075B6I7 105 aa-1.55□□□□□ -2.66
ECHDC1-201ENST00000368287 DNAH17Q9UFH2 4485 aa-1.55□□□□□ -2.66
ECHDC1-201ENST00000368287 TOGARAM1Q9Y4F4 1720 aa-1.56□□□□□ -2.66
ECHDC1-201ENST00000368287 SMIM13P0DJ93 91 aa-1.56□□□□□ -2.66
ECHDC1-201ENST00000368287 DEFB121Q5J5C9 76 aa-1.56□□□□□ -2.66
ECHDC1-201ENST00000368287 ATP5EP2Q5VTU8 51 aa-1.56□□□□□ -2.66
ECHDC1-201ENST00000368287 MT1MQ8N339 61 aa-1.56□□□□□ -2.66
ECHDC1-201ENST00000368287 ZC3H13Q5T200 1668 aaKnown RBP-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 A0A087WXM4 84 aa-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 MT2AP02795 61 aa-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 HMGA1P17096 107 aaKnown RBP-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 WT1-ASQ06250 92 aa-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 ABCA13Q86UQ4 5058 aa-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 ADGRG4Q8IZF6 3080 aa-1.57□□□□□ -2.66
ECHDC1-201ENST00000368287 SMG1Q96Q15 3661 aaKnown RBP-1.58□□□□□ -2.66
ECHDC1-201ENST00000368287 DEFB131BA0A096LNP1 70 aa-1.58□□□□□ -2.66
ECHDC1-201ENST00000368287 PARP4Q9UKK3 1724 aaKnown RBP-1.59□□□□□ -2.66
ECHDC1-201ENST00000368287 ST20Q9HBF5 79 aa-1.59□□□□□ -2.66
ECHDC1-201ENST00000368287 CDC42BPGQ6DT37 1551 aa-1.59□□□□□ -2.66
ECHDC1-201ENST00000368287 H3BUT2 72 aa-1.61□□□□□ -2.67
ECHDC1-201ENST00000368287 RNF17Q9BXT8 1623 aaKnown RBP-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 DNAH5Q8TE73 4624 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 THOC2Q8NI27 1593 aaKnown RBP-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 MT1BP07438 61 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 CRIP1P50238 77 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 ADIRFQ15847 76 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 ITSN2Q9NZM3 1697 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 KDM5DQ9BY66 1539 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 MGAQ8IWI9 3026 aa-1.62□□□□□ -2.67
ECHDC1-201ENST00000368287 ITPR2Q14571 2701 aa-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 MRPL33O75394 65 aaKnown RBP-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 BVES-AS1Q5T3Y7 98 aa-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 NOP10Q9NPE3 64 aaKnown RBP-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 KIAA0586Q9BVV6 1533 aa-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 TLN1Q9Y490 2541 aaKnown RBP-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 DMXL2Q8TDJ6 3036 aa-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 LY75O60449 1722 aa-1.63□□□□□ -2.67
ECHDC1-201ENST00000368287 ARHGAP35Q9NRY4 1499 aa-1.64□□□□□ -2.67
ECHDC1-201ENST00000368287 H3BUA1 57 aa-1.65□□□□□ -2.67
ECHDC1-201ENST00000368287 RPS27P42677 84 aaKnown RBP-1.65□□□□□ -2.67
ECHDC1-201ENST00000368287 GNG2P59768 71 aa-1.65□□□□□ -2.67
ECHDC1-201ENST00000368287 RPS27LQ71UM5 84 aaKnown RBP-1.65□□□□□ -2.67
ECHDC1-201ENST00000368287 KCNQ1DNQ9H478 68 aa-1.65□□□□□ -2.67
ECHDC1-201ENST00000368287 DNAH10Q8IVF4 4471 aa-1.66□□□□□ -2.67
ECHDC1-201ENST00000368287 NRAPQ86VF7 1730 aa-1.66□□□□□ -2.68
ECHDC1-201ENST00000368287 KIF1AQ12756 1690 aa-1.67□□□□□ -2.68
ECHDC1-201ENST00000368287 MAST1Q9Y2H9 1570 aa-1.67□□□□□ -2.68
ECHDC1-201ENST00000368287 DCAF1Q9Y4B6 1507 aa-1.67□□□□□ -2.68
ECHDC1-201ENST00000368287 MED14O60244 1454 aa-1.68□□□□□ -2.68
ECHDC1-201ENST00000368287 CD163L1Q9NR16 1453 aa-1.68□□□□□ -2.68
ECHDC1-201ENST00000368287 LINC01546A6NGU7 62 aa-1.68□□□□□ -2.68
ECHDC1-201ENST00000368287 MINOS1Q5TGZ0 78 aa-1.68□□□□□ -2.68
ECHDC1-201ENST00000368287 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.69□□□□□ -2.68
ECHDC1-201ENST00000368287 S100A13Q99584 98 aa-1.69□□□□□ -2.68
ECHDC1-201ENST00000368287 HFM1A2PYH4 1435 aa-1.69□□□□□ -2.68
ECHDC1-201ENST00000368287 UBL5Q9BZL1 73 aa-1.7□□□□□ -2.68
ECHDC1-201ENST00000368287 ERVK-7P63135 1459 aa-1.7□□□□□ -2.68
ECHDC1-201ENST00000368287 RALGAPBQ86X10 1494 aa-1.7□□□□□ -2.68
ECHDC1-201ENST00000368287 ATMQ13315 3056 aa-1.7□□□□□ -2.68
ECHDC1-201ENST00000368287 M0QZ58 72 aa-1.71□□□□□ -2.68
ECHDC1-201ENST00000368287 KRTAP20-1Q3LI63 56 aa-1.71□□□□□ -2.68
ECHDC1-201ENST00000368287 M0QY20 66 aa-1.72□□□□□ -2.68
ECHDC1-201ENST00000368287 DEFB4AO15263 64 aa-1.72□□□□□ -2.68
ECHDC1-201ENST00000368287 LRRIQ1Q96JM4 1722 aa-1.72□□□□□ -2.69
ECHDC1-201ENST00000368287 ABCC1P33527 1531 aa-1.72□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 276.7 ms