RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 K7ERU9 68 aa6.64□□□□□ -1.35
VAMP4-202ENST00000367740 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
VAMP4-202ENST00000367740 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
VAMP4-202ENST00000367740 FAM218AQ96MZ4 157 aa6.63□□□□□ -1.35
VAMP4-202ENST00000367740 VAMP3Q15836 100 aa6.62□□□□□ -1.35
VAMP4-202ENST00000367740 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
VAMP4-202ENST00000367740 UBE2V1Q13404 147 aa6.61□□□□□ -1.35
VAMP4-202ENST00000367740 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.61□□□□□ -1.35
VAMP4-202ENST00000367740 HIST3H2BBQ8N257 126 aa6.61□□□□□ -1.35
VAMP4-202ENST00000367740 COPS9Q8WXC6 57 aa6.61□□□□□ -1.35
VAMP4-202ENST00000367740 IFITM1P13164 125 aa6.6□□□□□ -1.35
VAMP4-202ENST00000367740 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
VAMP4-202ENST00000367740 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
VAMP4-202ENST00000367740 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
VAMP4-202ENST00000367740 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
VAMP4-202ENST00000367740 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
VAMP4-202ENST00000367740 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
VAMP4-202ENST00000367740 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
VAMP4-202ENST00000367740 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
VAMP4-202ENST00000367740 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
VAMP4-202ENST00000367740 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
VAMP4-202ENST00000367740 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 SPRR2DP22532 72 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 DEFB116Q30KQ4 102 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
VAMP4-202ENST00000367740 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
VAMP4-202ENST00000367740 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
VAMP4-202ENST00000367740 LINC01545Q5VT33 79 aa6.48□□□□□ -1.37
VAMP4-202ENST00000367740 TRGC2P03986 189 aa6.47□□□□□ -1.37
VAMP4-202ENST00000367740 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
VAMP4-202ENST00000367740 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
VAMP4-202ENST00000367740 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
VAMP4-202ENST00000367740 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
VAMP4-202ENST00000367740 C3orf79P0CE67 100 aa6.44□□□□□ -1.38
VAMP4-202ENST00000367740 H3BMG7 143 aa6.43□□□□□ -1.38
VAMP4-202ENST00000367740 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
VAMP4-202ENST00000367740 C5orf47Q569G3 176 aa6.42□□□□□ -1.38
VAMP4-202ENST00000367740 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
VAMP4-202ENST00000367740 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
VAMP4-202ENST00000367740 UQCR10Q9UDW1 63 aa6.42□□□□□ -1.38
VAMP4-202ENST00000367740 IMUPQ9GZP8 106 aa6.41□□□□□ -1.38
VAMP4-202ENST00000367740 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
VAMP4-202ENST00000367740 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
VAMP4-202ENST00000367740 J3QR89 54 aa6.38□□□□□ -1.39
VAMP4-202ENST00000367740 VAMP8Q9BV40 100 aa6.38□□□□□ -1.39
VAMP4-202ENST00000367740 BATFQ16520 125 aa6.36□□□□□ -1.39
VAMP4-202ENST00000367740 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
VAMP4-202ENST00000367740 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
VAMP4-202ENST00000367740 TRIAP1O43715 76 aa6.32□□□□□ -1.4
VAMP4-202ENST00000367740 LYRM7Q5U5X0 104 aa6.32□□□□□ -1.4
VAMP4-202ENST00000367740 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
VAMP4-202ENST00000367740 HSD52Q0P140 79 aa6.31□□□□□ -1.4
VAMP4-202ENST00000367740 IGKV3D-7A0A0C4DH55 119 aa6.3□□□□□ -1.4
VAMP4-202ENST00000367740 FABP2P12104 132 aa6.3□□□□□ -1.4
VAMP4-202ENST00000367740 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
VAMP4-202ENST00000367740 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
VAMP4-202ENST00000367740 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
VAMP4-202ENST00000367740 ATOH7Q8N100 152 aa6.27□□□□□ -1.41
VAMP4-202ENST00000367740 TAX1BP3O14907 124 aa6.26□□□□□ -1.41
VAMP4-202ENST00000367740 SNCGO76070 127 aa6.26□□□□□ -1.41
VAMP4-202ENST00000367740 TRACP01848 142 aa6.26□□□□□ -1.41
VAMP4-202ENST00000367740 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.26□□□□□ -1.41
VAMP4-202ENST00000367740 CCKP06307 115 aa6.25□□□□□ -1.41
VAMP4-202ENST00000367740 SPATA45Q537H7 98 aa6.25□□□□□ -1.41
VAMP4-202ENST00000367740 PAM16Q9Y3D7 125 aa6.25□□□□□ -1.41
VAMP4-202ENST00000367740 SMIM20Q8N5G0 67 aa6.24□□□□□ -1.41
VAMP4-202ENST00000367740 KRTDAPP60985 99 aa6.23□□□□□ -1.41
VAMP4-202ENST00000367740 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
VAMP4-202ENST00000367740 H0YGX0 51 aa6.22□□□□□ -1.41
VAMP4-202ENST00000367740 K7EP34 96 aa6.22□□□□□ -1.41
VAMP4-202ENST00000367740 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
VAMP4-202ENST00000367740 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
VAMP4-202ENST00000367740 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
VAMP4-202ENST00000367740 J3KT08 172 aa6.18□□□□□ -1.42
VAMP4-202ENST00000367740 F8W1H4 67 aa6.17□□□□□ -1.42
VAMP4-202ENST00000367740 A0A1B0GX51 115 aa6.16□□□□□ -1.42
VAMP4-202ENST00000367740 MT1XP80297 61 aa6.15□□□□□ -1.42
VAMP4-202ENST00000367740 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
VAMP4-202ENST00000367740 NDUFB1O75438 58 aa6.14□□□□□ -1.43
VAMP4-202ENST00000367740 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
VAMP4-202ENST00000367740 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
VAMP4-202ENST00000367740 Q6ZVQ6 151 aa6.14□□□□□ -1.43
VAMP4-202ENST00000367740 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
VAMP4-202ENST00000367740 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
VAMP4-202ENST00000367740 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
VAMP4-202ENST00000367740 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
VAMP4-202ENST00000367740 C2orf91Q6ZV80 131 aa6.12□□□□□ -1.43
VAMP4-202ENST00000367740 S4R3F8 94 aa6.11□□□□□ -1.43
VAMP4-202ENST00000367740 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms