RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 Q8N377 158 aa2.9□□□□□ -1.94
RC3H1-202ENST00000367694 DHRS4-AS1Q9P1J3 65 aa2.9□□□□□ -1.95
RC3H1-202ENST00000367694 A0A1B0GU69 56 aa2.89□□□□□ -1.95
RC3H1-202ENST00000367694 A0A1B0GUV1 79 aa2.89□□□□□ -1.95
RC3H1-202ENST00000367694 FAM168BA1KXE4 195 aa2.89□□□□□ -1.95
RC3H1-202ENST00000367694 GIG44P09565 113 aaPredicted RBP2.89□□□□□ -1.95
RC3H1-202ENST00000367694 PRO0255Q9UI72 69 aa2.89□□□□□ -1.95
RC3H1-202ENST00000367694 UNQ6190/PRO20217Q6UXQ8 127 aa2.88□□□□□ -1.95
RC3H1-202ENST00000367694 KRTAP11-1Q8IUC1 163 aa2.88□□□□□ -1.95
RC3H1-202ENST00000367694 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
RC3H1-202ENST00000367694 KRTAP1-3Q8IUG1 177 aa2.88□□□□□ -1.95
RC3H1-202ENST00000367694 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
RC3H1-202ENST00000367694 HTN3P15516 51 aa2.86□□□□□ -1.95
RC3H1-202ENST00000367694 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
RC3H1-202ENST00000367694 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
RC3H1-202ENST00000367694 ACYP2P14621 99 aa2.86□□□□□ -1.95
RC3H1-202ENST00000367694 KRTAP1-1Q07627 177 aa2.85□□□□□ -1.95
RC3H1-202ENST00000367694 A0A1B0GU33 70 aa2.85□□□□□ -1.95
RC3H1-202ENST00000367694 DEFB4AO15263 64 aa2.85□□□□□ -1.95
RC3H1-202ENST00000367694 ANK2Q01484 3957 aa2.84□□□□□ -1.96
RC3H1-202ENST00000367694 DEFB105AQ8NG35 78 aa2.84□□□□□ -1.96
RC3H1-202ENST00000367694 DEFB135Q30KP9 77 aa2.83□□□□□ -1.96
RC3H1-202ENST00000367694 WFDC13Q8IUB5 93 aa2.83□□□□□ -1.96
RC3H1-202ENST00000367694 MEGF8Q7Z7M0 2845 aa2.83□□□□□ -1.96
RC3H1-202ENST00000367694 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
RC3H1-202ENST00000367694 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
RC3H1-202ENST00000367694 LELP1Q5T871 98 aa2.82□□□□□ -1.96
RC3H1-202ENST00000367694 H0YAA0 97 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 DEFB116Q30KQ4 102 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 VPS13CQ709C8 3753 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 SPRR1AP35321 89 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 A0A0G2JQZ4 141 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 SPART-AS1P0CW21 52 aa2.81□□□□□ -1.96
RC3H1-202ENST00000367694 TPRXLQ17RH7 258 aa2.8□□□□□ -1.96
RC3H1-202ENST00000367694 WFDC10BQ8IUB3 73 aa2.8□□□□□ -1.96
RC3H1-202ENST00000367694 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
RC3H1-202ENST00000367694 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
RC3H1-202ENST00000367694 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
RC3H1-202ENST00000367694 KRTAP23-1A1A580 65 aa2.78□□□□□ -1.96
RC3H1-202ENST00000367694 K7EIL1 84 aa2.78□□□□□ -1.96
RC3H1-202ENST00000367694 PSORS1C2Q9UIG4 136 aa2.77□□□□□ -1.97
RC3H1-202ENST00000367694 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
RC3H1-202ENST00000367694 Q6ZRX8 168 aa2.76□□□□□ -1.97
RC3H1-202ENST00000367694 CUBNO60494 3623 aa2.76□□□□□ -1.97
RC3H1-202ENST00000367694 Q6ZSA8 131 aa2.76□□□□□ -1.97
RC3H1-202ENST00000367694 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
RC3H1-202ENST00000367694 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
RC3H1-202ENST00000367694 RPL37AP61513 92 aaKnown RBP2.74□□□□□ -1.97
RC3H1-202ENST00000367694 KRTAP10-3P60369 221 aa2.74□□□□□ -1.97
RC3H1-202ENST00000367694 UBE2DNLQ8IWF7 75 aa2.74□□□□□ -1.97
RC3H1-202ENST00000367694 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
RC3H1-202ENST00000367694 SPRR1BP22528 89 aa2.71□□□□□ -1.98
RC3H1-202ENST00000367694 H3BNG1 76 aa2.71□□□□□ -1.98
RC3H1-202ENST00000367694 Q8N1X5 172 aa2.71□□□□□ -1.98
RC3H1-202ENST00000367694 LINC01556Q5JQF7 62 aa2.71□□□□□ -1.98
RC3H1-202ENST00000367694 ANK3Q12955 4377 aaKnown RBP2.7□□□□□ -1.98
RC3H1-202ENST00000367694 DNAH3Q8TD57 4116 aa2.7□□□□□ -1.98
RC3H1-202ENST00000367694 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
RC3H1-202ENST00000367694 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
RC3H1-202ENST00000367694 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
RC3H1-202ENST00000367694 PRLHP81277 87 aa2.68□□□□□ -1.98
RC3H1-202ENST00000367694 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
RC3H1-202ENST00000367694 A0A096LNI7 61 aa2.66□□□□□ -1.98
RC3H1-202ENST00000367694 RYR1P21817 5038 aa2.66□□□□□ -1.98
RC3H1-202ENST00000367694 VPS13DQ5THJ4 4388 aa2.66□□□□□ -1.98
RC3H1-202ENST00000367694 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.99
RC3H1-202ENST00000367694 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
RC3H1-202ENST00000367694 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
RC3H1-202ENST00000367694 ZNF469Q96JG9 3925 aaPredicted RBP2.64□□□□□ -1.99
RC3H1-202ENST00000367694 IGKV2-30P06310 120 aa2.64□□□□□ -1.99
RC3H1-202ENST00000367694 SPACA4Q8TDM5 124 aa2.64□□□□□ -1.99
RC3H1-202ENST00000367694 CRIPTQ9P021 101 aa2.64□□□□□ -1.99
RC3H1-202ENST00000367694 KRTAP10-11P60412 298 aa2.64□□□□□ -1.99
RC3H1-202ENST00000367694 IGKV2D-30A0A075B6S6 120 aa2.63□□□□□ -1.99
RC3H1-202ENST00000367694 XP32Q5T750 250 aa2.61□□□□□ -1.99
RC3H1-202ENST00000367694 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
RC3H1-202ENST00000367694 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
RC3H1-202ENST00000367694 FRAS1Q86XX4 4008 aa2.61□□□□□ -1.99
RC3H1-202ENST00000367694 DYNC2H1Q8NCM8 4307 aaKnown RBP2.6□□□□□ -1.99
RC3H1-202ENST00000367694 SMR3BP02814 79 aaPredicted RBP2.6□□□□□ -1.99
RC3H1-202ENST00000367694 C14orf177Q52M58 125 aa2.6□□□□□ -1.99
RC3H1-202ENST00000367694 Q6ZRN7 208 aaPredicted RBP2.6□□□□□ -1.99
RC3H1-202ENST00000367694 PLAC4Q8WY50 150 aa2.6□□□□□ -1.99
RC3H1-202ENST00000367694 KMT2CQ8NEZ4 4911 aaKnown RBP2.59□□□□□ -1.99
RC3H1-202ENST00000367694 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
RC3H1-202ENST00000367694 PCLOQ9Y6V0 5065 aa2.59□□□□□ -2
RC3H1-202ENST00000367694 INE1O15225 51 aa2.58□□□□□ -2
RC3H1-202ENST00000367694 KRTAP4-5Q9BYR2 181 aa2.58□□□□□ -2
RC3H1-202ENST00000367694 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
RC3H1-202ENST00000367694 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
RC3H1-202ENST00000367694 R4GN34 69 aa2.57□□□□□ -2
RC3H1-202ENST00000367694 DNAH7Q8WXX0 4024 aa2.56□□□□□ -2
RC3H1-202ENST00000367694 SPINK6Q6UWN8 80 aa2.56□□□□□ -2
RC3H1-202ENST00000367694 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
RC3H1-202ENST00000367694 Q5VSD8 79 aa2.56□□□□□ -2
RC3H1-202ENST00000367694 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
RC3H1-202ENST00000367694 RPL37P61927 97 aaKnown RBP2.55□□□□□ -2
RC3H1-202ENST00000367694 KRTAP1-5Q9BYS1 174 aa2.55□□□□□ -2
RC3H1-202ENST00000367694 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
RC3H1-202ENST00000367694 KRTAP12-2P59991 146 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms