RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 LEPROTO15243 131 aa4.51□□□□□ -1.69
HMGB1P39-201ENST00000366304 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
HMGB1P39-201ENST00000366304 NDUFA12Q9UI09 145 aa4.51□□□□□ -1.69
HMGB1P39-201ENST00000366304 IGLV5-45A0A087WSX0 123 aa4.5□□□□□ -1.69
HMGB1P39-201ENST00000366304 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
HMGB1P39-201ENST00000366304 RPS29P62273 56 aaKnown RBP4.5□□□□□ -1.69
HMGB1P39-201ENST00000366304 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
HMGB1P39-201ENST00000366304 TRBV7-6A0A0J9YX20 115 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 TIMM17BO60830 172 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 MOBPQ13875 183 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 MUSTN1Q8IVN3 82 aa4.49□□□□□ -1.69
HMGB1P39-201ENST00000366304 COX7B2Q8TF08 81 aa4.48□□□□□ -1.69
HMGB1P39-201ENST00000366304 TRAV7A0A075B6U4 112 aa4.47□□□□□ -1.69
HMGB1P39-201ENST00000366304 Q8N9P0 234 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P39-201ENST00000366304 SMCR5Q8TEV8 140 aa4.47□□□□□ -1.69
HMGB1P39-201ENST00000366304 SND1-IT1Q9HBX3 110 aa4.47□□□□□ -1.69
HMGB1P39-201ENST00000366304 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
HMGB1P39-201ENST00000366304 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
HMGB1P39-201ENST00000366304 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
HMGB1P39-201ENST00000366304 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
HMGB1P39-201ENST00000366304 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
HMGB1P39-201ENST00000366304 ERC2-IT1O76042 136 aa4.45□□□□□ -1.7
HMGB1P39-201ENST00000366304 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
HMGB1P39-201ENST00000366304 ZNF706Q9Y5V0 76 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P39-201ENST00000366304 NEBP20929 6669 aa4.44□□□□□ -1.7
HMGB1P39-201ENST00000366304 DNAL4O96015 105 aa4.44□□□□□ -1.7
HMGB1P39-201ENST00000366304 MT2AP02795 61 aa4.44□□□□□ -1.7
HMGB1P39-201ENST00000366304 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
HMGB1P39-201ENST00000366304 SSBP3-AS1Q7Z2R9 100 aa4.44□□□□□ -1.7
HMGB1P39-201ENST00000366304 H7C2G1 150 aa4.43□□□□□ -1.7
HMGB1P39-201ENST00000366304 TRAV13-2A0A0B4J235 113 aa4.42□□□□□ -1.7
HMGB1P39-201ENST00000366304 H0YGX0 51 aa4.42□□□□□ -1.7
HMGB1P39-201ENST00000366304 H7BZZ5 65 aa4.42□□□□□ -1.7
HMGB1P39-201ENST00000366304 MT1FP04733 61 aa4.42□□□□□ -1.7
HMGB1P39-201ENST00000366304 CCKP06307 115 aa4.42□□□□□ -1.7
HMGB1P39-201ENST00000366304 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
HMGB1P39-201ENST00000366304 SPRR1AP35321 89 aa4.41□□□□□ -1.7
HMGB1P39-201ENST00000366304 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
HMGB1P39-201ENST00000366304 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
HMGB1P39-201ENST00000366304 JMJD7-PLA2G4BH0Y9G9 81 aa4.4□□□□□ -1.71
HMGB1P39-201ENST00000366304 NDUFS5O43920 106 aa4.4□□□□□ -1.71
HMGB1P39-201ENST00000366304 RPL37P61927 97 aaKnown RBP4.4□□□□□ -1.71
HMGB1P39-201ENST00000366304 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P39-201ENST00000366304 COX17Q14061 63 aa4.39□□□□□ -1.71
HMGB1P39-201ENST00000366304 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
HMGB1P39-201ENST00000366304 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
HMGB1P39-201ENST00000366304 H3BQ85 93 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 PRYO14603 147 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 Q9BRP9 147 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
HMGB1P39-201ENST00000366304 LITAFQ99732 161 aa4.37□□□□□ -1.71
HMGB1P39-201ENST00000366304 UBL5Q9BZL1 73 aa4.37□□□□□ -1.71
HMGB1P39-201ENST00000366304 LINC00158P58513 81 aa4.36□□□□□ -1.71
HMGB1P39-201ENST00000366304 Q1T7F1 81 aa4.36□□□□□ -1.71
HMGB1P39-201ENST00000366304 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
HMGB1P39-201ENST00000366304 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
HMGB1P39-201ENST00000366304 NCR3O14931 201 aa4.35□□□□□ -1.71
HMGB1P39-201ENST00000366304 PDE6GP18545 87 aa4.35□□□□□ -1.71
HMGB1P39-201ENST00000366304 MIR7-3HGQ8N6C7 128 aa4.34□□□□□ -1.71
HMGB1P39-201ENST00000366304 LINC00846Q9NV44 126 aa4.34□□□□□ -1.71
HMGB1P39-201ENST00000366304 F8WEM9 126 aa4.33□□□□□ -1.72
HMGB1P39-201ENST00000366304 ST20-AS1Q8NBB2 130 aa4.33□□□□□ -1.72
HMGB1P39-201ENST00000366304 CXCL6P80162 114 aa4.32□□□□□ -1.72
HMGB1P39-201ENST00000366304 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
HMGB1P39-201ENST00000366304 LINC00308Q8TCZ7 52 aa4.32□□□□□ -1.72
HMGB1P39-201ENST00000366304 TMEM256-PLSCR3K7ERE1 68 aa4.31□□□□□ -1.72
HMGB1P39-201ENST00000366304 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
HMGB1P39-201ENST00000366304 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
HMGB1P39-201ENST00000366304 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
HMGB1P39-201ENST00000366304 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
HMGB1P39-201ENST00000366304 Q6ZRX8 168 aa4.3□□□□□ -1.72
HMGB1P39-201ENST00000366304 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
HMGB1P39-201ENST00000366304 ORMDL1Q9P0S3 153 aa4.3□□□□□ -1.72
HMGB1P39-201ENST00000366304 A0A087WVE0 104 aa4.29□□□□□ -1.72
HMGB1P39-201ENST00000366304 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
HMGB1P39-201ENST00000366304 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
HMGB1P39-201ENST00000366304 SOSTDC1Q6X4U4 206 aa4.28□□□□□ -1.72
HMGB1P39-201ENST00000366304 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
HMGB1P39-201ENST00000366304 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
HMGB1P39-201ENST00000366304 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
HMGB1P39-201ENST00000366304 A0A0G2JQZ4 141 aa4.26□□□□□ -1.73
HMGB1P39-201ENST00000366304 Q6ZVQ6 151 aa4.26□□□□□ -1.73
HMGB1P39-201ENST00000366304 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
HMGB1P39-201ENST00000366304 LOC110117498A0A087WWA1 95 aa4.25□□□□□ -1.73
HMGB1P39-201ENST00000366304 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
HMGB1P39-201ENST00000366304 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
HMGB1P39-201ENST00000366304 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
HMGB1P39-201ENST00000366304 SPRR1BP22528 89 aa4.24□□□□□ -1.73
HMGB1P39-201ENST00000366304 LCA10Q71F78 164 aa4.24□□□□□ -1.73
HMGB1P39-201ENST00000366304 SMIM29Q86T20 159 aa4.24□□□□□ -1.73
HMGB1P39-201ENST00000366304 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
HMGB1P39-201ENST00000366304 NDUFB1O75438 58 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms