RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 MAP3K4Q9Y6R4 1608 aa-2.14□□□□□ -2.75
RNU6-560P-201ENST00000364007 TLN2Q9Y4G6 2542 aa-2.15□□□□□ -2.75
RNU6-560P-201ENST00000364007 LCE6AA0A183 80 aa-2.15□□□□□ -2.75
RNU6-560P-201ENST00000364007 CEBPZOSA8MTT3 80 aa-2.15□□□□□ -2.75
RNU6-560P-201ENST00000364007 ITSN1Q15811 1721 aa-2.15□□□□□ -2.75
RNU6-560P-201ENST00000364007 URB2Q14146 1524 aaKnown RBP-2.16□□□□□ -2.75
RNU6-560P-201ENST00000364007 DEFB1P60022 68 aa-2.16□□□□□ -2.76
RNU6-560P-201ENST00000364007 RABAC1Q9UI14 185 aa-2.16□□□□□ -2.76
RNU6-560P-201ENST00000364007 SNRPFP62306 86 aaKnown RBP-2.17□□□□□ -2.76
RNU6-560P-201ENST00000364007 KRTAP19-5Q3LI72 72 aa-2.17□□□□□ -2.76
RNU6-560P-201ENST00000364007 MT1MQ8N339 61 aa-2.17□□□□□ -2.76
RNU6-560P-201ENST00000364007 RANBP2P49792 3224 aaKnown RBP-2.17□□□□□ -2.76
RNU6-560P-201ENST00000364007 DEFB110Q30KQ9 67 aa-2.18□□□□□ -2.76
RNU6-560P-201ENST00000364007 LINC00643Q86TS7 51 aa-2.18□□□□□ -2.76
RNU6-560P-201ENST00000364007 PRUNE2Q8WUY3 3088 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 DEFB130BP0DP73 79 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 DEFB130AP0DP74 79 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 PYY3Q5JQD4 70 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 ABCC3O15438 1527 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 CFAP43Q8NDM7 1665 aa-2.19□□□□□ -2.76
RNU6-560P-201ENST00000364007 LYNX1G3V0Z9 82 aa-2.2□□□□□ -2.76
RNU6-560P-201ENST00000364007 MT2AP02795 61 aa-2.2□□□□□ -2.76
RNU6-560P-201ENST00000364007 S100A16Q96FQ6 103 aaKnown RBP-2.2□□□□□ -2.76
RNU6-560P-201ENST00000364007 K7EP34 96 aa-2.21□□□□□ -2.76
RNU6-560P-201ENST00000364007 IFI6P09912 130 aa-2.21□□□□□ -2.76
RNU6-560P-201ENST00000364007 IAPPP10997 89 aa-2.21□□□□□ -2.76
RNU6-560P-201ENST00000364007 TJP1Q07157 1748 aa-2.22□□□□□ -2.76
RNU6-560P-201ENST00000364007 RICTORQ6R327 1708 aa-2.22□□□□□ -2.76
RNU6-560P-201ENST00000364007 SPTAN1Q13813 2472 aaKnown RBP-2.22□□□□□ -2.76
RNU6-560P-201ENST00000364007 IFI27P40305 119 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-560P-201ENST00000364007 DEFB106AQ8N104 65 aa-2.24□□□□□ -2.77
RNU6-560P-201ENST00000364007 DMDP11532 3685 aa-2.25□□□□□ -2.77
RNU6-560P-201ENST00000364007 UMAD1C9J7I0 102 aa-2.25□□□□□ -2.77
RNU6-560P-201ENST00000364007 Q9H521 79 aa-2.25□□□□□ -2.77
RNU6-560P-201ENST00000364007 CCNB3Q8WWL7 1395 aa-2.25□□□□□ -2.77
RNU6-560P-201ENST00000364007 CCDC88BA6NC98 1476 aa-2.26□□□□□ -2.77
RNU6-560P-201ENST00000364007 FREM2Q5SZK8 3169 aa-2.26□□□□□ -2.77
RNU6-560P-201ENST00000364007 CSMD2Q7Z408 3487 aa-2.27□□□□□ -2.77
RNU6-560P-201ENST00000364007 NDUFA4O00483 81 aa-2.27□□□□□ -2.77
RNU6-560P-201ENST00000364007 MT1EP04732 61 aa-2.27□□□□□ -2.77
RNU6-560P-201ENST00000364007 MT1LQ93083 61 aa-2.27□□□□□ -2.77
RNU6-560P-201ENST00000364007 TTC37Q6PGP7 1564 aa-2.27□□□□□ -2.77
RNU6-560P-201ENST00000364007 ZC3H13Q5T200 1668 aaKnown RBP-2.28□□□□□ -2.77
RNU6-560P-201ENST00000364007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.28□□□□□ -2.77
RNU6-560P-201ENST00000364007 PARP4Q9UKK3 1724 aaKnown RBP-2.28□□□□□ -2.78
RNU6-560P-201ENST00000364007 SMR3BP02814 79 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-560P-201ENST00000364007 V9GYS6 101 aa-2.32□□□□□ -2.78
RNU6-560P-201ENST00000364007 MGAQ8IWI9 3026 aa-2.33□□□□□ -2.78
RNU6-560P-201ENST00000364007 PVALEFA0A1B0GWK0 134 aa-2.34□□□□□ -2.78
RNU6-560P-201ENST00000364007 NREPQ16612 68 aa-2.34□□□□□ -2.78
RNU6-560P-201ENST00000364007 THOC2Q8NI27 1593 aaKnown RBP-2.35□□□□□ -2.79
RNU6-560P-201ENST00000364007 ITSN2Q9NZM3 1697 aa-2.35□□□□□ -2.79
RNU6-560P-201ENST00000364007 CENPEQ02224 2701 aa-2.35□□□□□ -2.79
RNU6-560P-201ENST00000364007 SPEGQ15772 3267 aa-2.36□□□□□ -2.79
RNU6-560P-201ENST00000364007 TOGARAM1Q9Y4F4 1720 aa-2.37□□□□□ -2.79
RNU6-560P-201ENST00000364007 CDC42BPGQ6DT37 1551 aa-2.37□□□□□ -2.79
RNU6-560P-201ENST00000364007 RNF17Q9BXT8 1623 aaKnown RBP-2.39□□□□□ -2.79
RNU6-560P-201ENST00000364007 CRYBG3Q68DQ2 2970 aa-2.39□□□□□ -2.79
RNU6-560P-201ENST00000364007 NRAPQ86VF7 1730 aa-2.39□□□□□ -2.79
RNU6-560P-201ENST00000364007 KIAA0586Q9BVV6 1533 aa-2.4□□□□□ -2.79
RNU6-560P-201ENST00000364007 TDRG1Q3Y452 100 aa-2.4□□□□□ -2.79
RNU6-560P-201ENST00000364007 WDFY3Q8IZQ1 3526 aa-2.4□□□□□ -2.79
RNU6-560P-201ENST00000364007 KANTRA0A1W2PQU2 76 aa-2.41□□□□□ -2.8
RNU6-560P-201ENST00000364007 DEFB131BA0A096LNP1 70 aa-2.42□□□□□ -2.8
RNU6-560P-201ENST00000364007 ATP5EP2Q5VTU8 51 aa-2.42□□□□□ -2.8
RNU6-560P-201ENST00000364007 DCHS1Q96JQ0 3298 aa-2.43□□□□□ -2.8
RNU6-560P-201ENST00000364007 KIF1AQ12756 1690 aa-2.44□□□□□ -2.8
RNU6-560P-201ENST00000364007 KRTAP8-1Q8IUC2 63 aa-2.46□□□□□ -2.8
RNU6-560P-201ENST00000364007 UACAQ9BZF9 1416 aa-2.46□□□□□ -2.8
RNU6-560P-201ENST00000364007 A0A087WXM4 84 aa-2.47□□□□□ -2.8
RNU6-560P-201ENST00000364007 KDM5DQ9BY66 1539 aa-2.48□□□□□ -2.81
RNU6-560P-201ENST00000364007 CEP350Q5VT06 3117 aa-2.48□□□□□ -2.81
RNU6-560P-201ENST00000364007 ARHGAP35Q9NRY4 1499 aa-2.49□□□□□ -2.81
RNU6-560P-201ENST00000364007 MT1FP04733 61 aa-2.49□□□□□ -2.81
RNU6-560P-201ENST00000364007 CFAP54Q96N23 3096 aa-2.49□□□□□ -2.81
RNU6-560P-201ENST00000364007 SMIM13P0DJ93 91 aa-2.5□□□□□ -2.81
RNU6-560P-201ENST00000364007 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.5□□□□□ -2.81
RNU6-560P-201ENST00000364007 HFM1A2PYH4 1435 aa-2.51□□□□□ -2.81
RNU6-560P-201ENST00000364007 LY75O60449 1722 aa-2.51□□□□□ -2.81
RNU6-560P-201ENST00000364007 VPS13CQ709C8 3753 aa-2.51□□□□□ -2.81
RNU6-560P-201ENST00000364007 MRPL33O75394 65 aaKnown RBP-2.51□□□□□ -2.81
RNU6-560P-201ENST00000364007 NHSQ6T4R5 1651 aa-2.52□□□□□ -2.81
RNU6-560P-201ENST00000364007 DEFB121Q5J5C9 76 aa-2.52□□□□□ -2.81
RNU6-560P-201ENST00000364007 DEFB4AO15263 64 aa-2.53□□□□□ -2.81
RNU6-560P-201ENST00000364007 WT1-ASQ06250 92 aa-2.53□□□□□ -2.81
RNU6-560P-201ENST00000364007 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-560P-201ENST00000364007 WDFY4Q6ZS81 3184 aa-2.53□□□□□ -2.82
RNU6-560P-201ENST00000364007 HMGA1P17096 107 aaKnown RBP-2.54□□□□□ -2.82
RNU6-560P-201ENST00000364007 KCNQ1DNQ9H478 68 aa-2.54□□□□□ -2.82
RNU6-560P-201ENST00000364007 INO80Q9ULG1 1556 aaPredicted RBP-2.54□□□□□ -2.82
RNU6-560P-201ENST00000364007 LRRIQ1Q96JM4 1722 aa-2.54□□□□□ -2.82
RNU6-560P-201ENST00000364007 CRIP1P50238 77 aa-2.55□□□□□ -2.82
RNU6-560P-201ENST00000364007 EP400Q96L91 3159 aa-2.55□□□□□ -2.82
RNU6-560P-201ENST00000364007 FRYLO94915 3013 aa-2.55□□□□□ -2.82
RNU6-560P-201ENST00000364007 CDC42BPAQ5VT25 1732 aa-2.56□□□□□ -2.82
RNU6-560P-201ENST00000364007 UBL5Q9BZL1 73 aa-2.56□□□□□ -2.82
RNU6-560P-201ENST00000364007 RALGAPBQ86X10 1494 aa-2.57□□□□□ -2.82
RNU6-560P-201ENST00000364007 ST20Q9HBF5 79 aa-2.57□□□□□ -2.82
RNU6-560P-201ENST00000364007 RPS27P42677 84 aaKnown RBP-2.59□□□□□ -2.82
RNU6-560P-201ENST00000364007 RPS27LQ71UM5 84 aaKnown RBP-2.59□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms