RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SPRR4Q96PI1 79 aa4.85□□□□□ -1.63
CCL28-201ENST00000361115 WFDC13Q8IUB5 93 aa4.85□□□□□ -1.63
CCL28-201ENST00000361115 PKHD1L1Q86WI1 4243 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 A0A1B0GW54 56 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 KRTAP10-2P60368 255 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 RPL37AP8A6NKH3 93 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 LINC00208Q96KT6 92 aa4.84□□□□□ -1.63
CCL28-201ENST00000361115 WFDC10BQ8IUB3 73 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 IGHV6-1A0A0B4J1U7 121 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 Q6ZRX8 168 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 NDUFB1O75438 58 aa4.83□□□□□ -1.64
CCL28-201ENST00000361115 KRTAP4-16G5E9R7 235 aaPredicted RBP4.82□□□□□ -1.64
CCL28-201ENST00000361115 DHRS4-AS1Q9P1J3 65 aa4.82□□□□□ -1.64
CCL28-201ENST00000361115 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
CCL28-201ENST00000361115 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
CCL28-201ENST00000361115 RPL37AP61513 92 aaKnown RBP4.8□□□□□ -1.64
CCL28-201ENST00000361115 KRTAP10-1P60331 282 aa4.8□□□□□ -1.64
CCL28-201ENST00000361115 A6NED7 52 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 IGKV2D-24A0A075B6R9 120 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 H0Y9P7 68 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
CCL28-201ENST00000361115 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
CCL28-201ENST00000361115 SPRR1AP35321 89 aa4.78□□□□□ -1.64
CCL28-201ENST00000361115 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
CCL28-201ENST00000361115 DNAH8Q96JB1 4490 aa4.78□□□□□ -1.64
CCL28-201ENST00000361115 MOBPQ13875 183 aa4.77□□□□□ -1.65
CCL28-201ENST00000361115 IGFL1Q6UW32 110 aa4.77□□□□□ -1.65
CCL28-201ENST00000361115 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
CCL28-201ENST00000361115 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
CCL28-201ENST00000361115 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 C9orf163Q8N9P6 203 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 A0A087WSZ3 146 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 COA5Q86WW8 74 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
CCL28-201ENST00000361115 LOC101927531A0A1B0GV80 90 aa4.75□□□□□ -1.65
CCL28-201ENST00000361115 CNBPP62633 177 aaKnown RBP4.75□□□□□ -1.65
CCL28-201ENST00000361115 CASC2Q6XLA1 102 aa4.75□□□□□ -1.65
CCL28-201ENST00000361115 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
CCL28-201ENST00000361115 XP32Q5T750 250 aa4.73□□□□□ -1.65
CCL28-201ENST00000361115 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
CCL28-201ENST00000361115 H3BPC8 53 aa4.73□□□□□ -1.65
CCL28-201ENST00000361115 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
CCL28-201ENST00000361115 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
CCL28-201ENST00000361115 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
CCL28-201ENST00000361115 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
CCL28-201ENST00000361115 TLX1NBP0CAT3 122 aa4.72□□□□□ -1.65
CCL28-201ENST00000361115 SPAG11AQ6PDA7 123 aa4.71□□□□□ -1.66
CCL28-201ENST00000361115 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
CCL28-201ENST00000361115 PCOTHQ58A44 107 aa4.7□□□□□ -1.66
CCL28-201ENST00000361115 SPINK7P58062 85 aa4.7□□□□□ -1.66
CCL28-201ENST00000361115 PLAC8Q9NZF1 115 aa4.7□□□□□ -1.66
CCL28-201ENST00000361115 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
CCL28-201ENST00000361115 PRLHP81277 87 aa4.69□□□□□ -1.66
CCL28-201ENST00000361115 LINC01558Q9Y6Z2 57 aa4.69□□□□□ -1.66
CCL28-201ENST00000361115 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
CCL28-201ENST00000361115 A8MWP4 228 aa4.68□□□□□ -1.66
CCL28-201ENST00000361115 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
CCL28-201ENST00000361115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
CCL28-201ENST00000361115 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
CCL28-201ENST00000361115 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
CCL28-201ENST00000361115 HRES1P13985 223 aa4.64□□□□□ -1.67
CCL28-201ENST00000361115 A0A096LNI7 61 aa4.63□□□□□ -1.67
CCL28-201ENST00000361115 SMR3BP02814 79 aaPredicted RBP4.63□□□□□ -1.67
CCL28-201ENST00000361115 SPINK6Q6UWN8 80 aa4.63□□□□□ -1.67
CCL28-201ENST00000361115 FAT1Q14517 4588 aa4.62□□□□□ -1.67
CCL28-201ENST00000361115 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
CCL28-201ENST00000361115 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
CCL28-201ENST00000361115 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
CCL28-201ENST00000361115 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
CCL28-201ENST00000361115 CIRBP-AS1Q8TBR5 109 aa4.61□□□□□ -1.67
CCL28-201ENST00000361115 DMBT1Q9UGM3 2413 aaPredicted RBP4.61□□□□□ -1.67
CCL28-201ENST00000361115 IGKV2-24A0A0C4DH68 120 aa4.61□□□□□ -1.67
CCL28-201ENST00000361115 ROMO1P60602 79 aa4.6□□□□□ -1.67
CCL28-201ENST00000361115 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
CCL28-201ENST00000361115 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
CCL28-201ENST00000361115 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
CCL28-201ENST00000361115 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
CCL28-201ENST00000361115 Q96NJ1 140 aa4.58□□□□□ -1.68
CCL28-201ENST00000361115 SPRR1BP22528 89 aa4.58□□□□□ -1.68
CCL28-201ENST00000361115 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
CCL28-201ENST00000361115 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
CCL28-201ENST00000361115 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
CCL28-201ENST00000361115 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
CCL28-201ENST00000361115 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
CCL28-201ENST00000361115 HERC1Q15751 4861 aa4.55□□□□□ -1.68
CCL28-201ENST00000361115 A0A087X002 238 aa4.55□□□□□ -1.68
CCL28-201ENST00000361115 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
CCL28-201ENST00000361115 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
CCL28-201ENST00000361115 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
CCL28-201ENST00000361115 TNXBP22105 4242 aa4.52□□□□□ -1.69
CCL28-201ENST00000361115 PANO1I0J062 215 aa4.52□□□□□ -1.69
CCL28-201ENST00000361115 A0A1B0GVX0 72 aa4.51□□□□□ -1.69
CCL28-201ENST00000361115 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms