RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATXN3-202ENST00000359366 LCE6AA0A183 80 aa3.2□□□□□ -1.9
ATXN3-202ENST00000359366 HAMPP81172 84 aa3.2□□□□□ -1.9
ATXN3-202ENST00000359366 PRLHP81277 87 aa3.2□□□□□ -1.9
ATXN3-202ENST00000359366 C9orf163Q8N9P6 203 aa3.2□□□□□ -1.9
ATXN3-202ENST00000359366 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 ETDCA0A1B0GVM5 59 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 PLA2G1BP04054 148 aaKnown RBP3.19□□□□□ -1.9
ATXN3-202ENST00000359366 C14orf177Q52M58 125 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 SCXQ7RTU7 201 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 KMT2CQ8NEZ4 4911 aaKnown RBP3.19□□□□□ -1.9
ATXN3-202ENST00000359366 A6NED7 52 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 RTL8CO15255 209 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 Q6ZQT0 140 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
ATXN3-202ENST00000359366 IGLV5-37A0A075B6J1 123 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-202ENST00000359366 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 KRTAP10-2P60368 255 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 CASC2Q6XLA1 102 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 Q6ZRX8 168 aa3.18□□□□□ -1.9
ATXN3-202ENST00000359366 A0A1B0GW54 56 aa3.17□□□□□ -1.9
ATXN3-202ENST00000359366 Q8N9P0 234 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-202ENST00000359366 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
ATXN3-202ENST00000359366 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
ATXN3-202ENST00000359366 IGLV5-52A0A0A0MRZ9 124 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 SPRR1AP35321 89 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-202ENST00000359366 Q8N377 158 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 MOBPQ13875 183 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
ATXN3-202ENST00000359366 ZCCHC13Q8WW36 166 aaKnown RBP3.15□□□□□ -1.9
ATXN3-202ENST00000359366 PRR15LQ9BU68 103 aa3.15□□□□□ -1.9
ATXN3-202ENST00000359366 FAM30AQ9NZY2 134 aa3.15□□□□□ -1.9
ATXN3-202ENST00000359366 VPS13BQ7Z7G8 4022 aa3.14□□□□□ -1.91
ATXN3-202ENST00000359366 A8MU10 97 aa3.14□□□□□ -1.91
ATXN3-202ENST00000359366 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
ATXN3-202ENST00000359366 RYR2Q92736 4967 aa3.14□□□□□ -1.91
ATXN3-202ENST00000359366 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
ATXN3-202ENST00000359366 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-202ENST00000359366 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
ATXN3-202ENST00000359366 RETNLBQ9BQ08 111 aa3.12□□□□□ -1.91
ATXN3-202ENST00000359366 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
ATXN3-202ENST00000359366 H3BPC8 53 aa3.12□□□□□ -1.91
ATXN3-202ENST00000359366 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
ATXN3-202ENST00000359366 PSORS1C2Q9UIG4 136 aa3.12□□□□□ -1.91
ATXN3-202ENST00000359366 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
ATXN3-202ENST00000359366 IGKV4-1P06312 121 aa3.11□□□□□ -1.91
ATXN3-202ENST00000359366 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
ATXN3-202ENST00000359366 IGLV5-48A0A075B6I7 105 aa3.1□□□□□ -1.91
ATXN3-202ENST00000359366 CIRBP-AS1Q8TBR5 109 aa3.1□□□□□ -1.91
ATXN3-202ENST00000359366 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
ATXN3-202ENST00000359366 RYR3Q15413 4870 aa3.1□□□□□ -1.91
ATXN3-202ENST00000359366 PLAC8Q9NZF1 115 aa3.1□□□□□ -1.91
ATXN3-202ENST00000359366 A0A1W2PNM2 257 aa3.09□□□□□ -1.91
ATXN3-202ENST00000359366 Q8N9L7 120 aa3.09□□□□□ -1.91
ATXN3-202ENST00000359366 DYNC1H1Q14204 4646 aaKnown RBP3.09□□□□□ -1.91
ATXN3-202ENST00000359366 IGLV9-49A0A0B4J1Y8 123 aa3.09□□□□□ -1.91
ATXN3-202ENST00000359366 KRTAP13-1Q8IUC0 172 aa3.09□□□□□ -1.91
ATXN3-202ENST00000359366 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
ATXN3-202ENST00000359366 IGFL1Q6UW32 110 aa3.08□□□□□ -1.92
ATXN3-202ENST00000359366 FAT1Q14517 4588 aa3.07□□□□□ -1.92
ATXN3-202ENST00000359366 Q8NBF4 154 aa3.06□□□□□ -1.92
ATXN3-202ENST00000359366 SPRR4Q96PI1 79 aa3.06□□□□□ -1.92
ATXN3-202ENST00000359366 A0A087WSZ3 146 aa3.06□□□□□ -1.92
ATXN3-202ENST00000359366 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-202ENST00000359366 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
ATXN3-202ENST00000359366 ZNF861PO60384 105 aa3.05□□□□□ -1.92
ATXN3-202ENST00000359366 IGLV7-43P04211 117 aa3.05□□□□□ -1.92
ATXN3-202ENST00000359366 APOBP04114 4563 aaKnown RBP3.05□□□□□ -1.92
ATXN3-202ENST00000359366 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
ATXN3-202ENST00000359366 Q6ZSA8 131 aa3.05□□□□□ -1.92
ATXN3-202ENST00000359366 SPRR1BP22528 89 aa3.04□□□□□ -1.92
ATXN3-202ENST00000359366 RPL37AP61513 92 aaKnown RBP3.04□□□□□ -1.92
ATXN3-202ENST00000359366 ROMO1P60602 79 aa3.03□□□□□ -1.92
ATXN3-202ENST00000359366 SPAG11AQ6PDA7 123 aa3.03□□□□□ -1.93
ATXN3-202ENST00000359366 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
ATXN3-202ENST00000359366 H0Y9P7 68 aa3.02□□□□□ -1.93
ATXN3-202ENST00000359366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-202ENST00000359366 COA5Q86WW8 74 aa3.02□□□□□ -1.93
ATXN3-202ENST00000359366 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
ATXN3-202ENST00000359366 K7EQZ3 153 aa3.02□□□□□ -1.93
ATXN3-202ENST00000359366 IGLV7-46A0A075B6I9 117 aa3.01□□□□□ -1.93
ATXN3-202ENST00000359366 DSCR10P59022 87 aa3.01□□□□□ -1.93
ATXN3-202ENST00000359366 PRR4Q16378 134 aa3.01□□□□□ -1.93
ATXN3-202ENST00000359366 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
ATXN3-202ENST00000359366 SPINK7P58062 85 aa3□□□□□ -1.93
ATXN3-202ENST00000359366 FLG2Q5D862 2391 aaPredicted RBP3□□□□□ -1.93
ATXN3-202ENST00000359366 CDK2AP2O75956 126 aa3□□□□□ -1.93
ATXN3-202ENST00000359366 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
ATXN3-202ENST00000359366 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
ATXN3-202ENST00000359366 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
ATXN3-202ENST00000359366 HSPG2P98160 4391 aa2.98□□□□□ -1.93
ATXN3-202ENST00000359366 SEC61BP60468 96 aaKnown RBP2.98□□□□□ -1.93
ATXN3-202ENST00000359366 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
ATXN3-202ENST00000359366 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms