RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
COL20A1-201ENST00000358894 SPRR1BP22528 89 aa7.48□□□□□ -1.21
COL20A1-201ENST00000358894 SSBP3-AS1Q7Z2R9 100 aa7.48□□□□□ -1.21
COL20A1-201ENST00000358894 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
COL20A1-201ENST00000358894 WWC2-AS2Q96NR7 200 aa7.47□□□□□ -1.21
COL20A1-201ENST00000358894 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
COL20A1-201ENST00000358894 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
COL20A1-201ENST00000358894 PLA2G1BP04054 148 aaKnown RBP7.46□□□□□ -1.21
COL20A1-201ENST00000358894 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
COL20A1-201ENST00000358894 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
COL20A1-201ENST00000358894 SPINT4Q6UDR6 99 aa7.45□□□□□ -1.22
COL20A1-201ENST00000358894 TENM2Q9NT68 2774 aa7.44□□□□□ -1.22
COL20A1-201ENST00000358894 A6NN06 94 aa7.43□□□□□ -1.22
COL20A1-201ENST00000358894 ANK3Q12955 4377 aaKnown RBP7.43□□□□□ -1.22
COL20A1-201ENST00000358894 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
COL20A1-201ENST00000358894 Q96NJ1 140 aa7.41□□□□□ -1.22
COL20A1-201ENST00000358894 PLAC8Q9NZF1 115 aa7.4□□□□□ -1.22
COL20A1-201ENST00000358894 HRES1P13985 223 aa7.39□□□□□ -1.23
COL20A1-201ENST00000358894 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
COL20A1-201ENST00000358894 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
COL20A1-201ENST00000358894 Q6ZRN7 208 aaPredicted RBP7.34□□□□□ -1.23
COL20A1-201ENST00000358894 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
COL20A1-201ENST00000358894 Q8N1X5 172 aa7.33□□□□□ -1.24
COL20A1-201ENST00000358894 TGP01266 2768 aa7.33□□□□□ -1.24
COL20A1-201ENST00000358894 LCE6AA0A183 80 aa7.31□□□□□ -1.24
COL20A1-201ENST00000358894 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
COL20A1-201ENST00000358894 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
COL20A1-201ENST00000358894 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
COL20A1-201ENST00000358894 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
COL20A1-201ENST00000358894 A0A087X002 238 aa7.28□□□□□ -1.24
COL20A1-201ENST00000358894 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
COL20A1-201ENST00000358894 LINC00483Q53H64 154 aa7.27□□□□□ -1.24
COL20A1-201ENST00000358894 Q6ZR54 194 aa7.27□□□□□ -1.24
COL20A1-201ENST00000358894 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
COL20A1-201ENST00000358894 KRTAP10-1P60331 282 aa7.23□□□□□ -1.25
COL20A1-201ENST00000358894 A0A0D9SG42 100 aa7.21□□□□□ -1.26
COL20A1-201ENST00000358894 SRRM2Q9UQ35 2752 aaKnown RBP7.21□□□□□ -1.26
COL20A1-201ENST00000358894 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
COL20A1-201ENST00000358894 Q5W150 140 aa7.19□□□□□ -1.26
COL20A1-201ENST00000358894 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
COL20A1-201ENST00000358894 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
COL20A1-201ENST00000358894 A0A1B0GU33 70 aa7.1□□□□□ -1.27
COL20A1-201ENST00000358894 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
COL20A1-201ENST00000358894 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
COL20A1-201ENST00000358894 DMAC1Q96GE9 116 aa7.04□□□□□ -1.28
COL20A1-201ENST00000358894 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
COL20A1-201ENST00000358894 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
COL20A1-201ENST00000358894 ROMO1P60602 79 aa6.97□□□□□ -1.29
COL20A1-201ENST00000358894 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
COL20A1-201ENST00000358894 MEGF8Q7Z7M0 2845 aa6.94□□□□□ -1.3
COL20A1-201ENST00000358894 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
COL20A1-201ENST00000358894 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
COL20A1-201ENST00000358894 Q6ZSA8 131 aa6.86□□□□□ -1.31
COL20A1-201ENST00000358894 KRTAP1-4P0C5Y4 121 aa6.85□□□□□ -1.31
COL20A1-201ENST00000358894 HUWE1Q7Z6Z7 4374 aaKnown RBP6.82□□□□□ -1.32
COL20A1-201ENST00000358894 A8MUU9 505 aa6.8□□□□□ -1.32
COL20A1-201ENST00000358894 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
COL20A1-201ENST00000358894 Q5VSD8 79 aa6.79□□□□□ -1.32
COL20A1-201ENST00000358894 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
COL20A1-201ENST00000358894 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
COL20A1-201ENST00000358894 J3QL48 77 aa6.76□□□□□ -1.33
COL20A1-201ENST00000358894 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
COL20A1-201ENST00000358894 RPS29P62273 56 aaKnown RBP6.72□□□□□ -1.33
COL20A1-201ENST00000358894 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
COL20A1-201ENST00000358894 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
COL20A1-201ENST00000358894 S4R3F8 94 aa6.67□□□□□ -1.34
COL20A1-201ENST00000358894 DNAH10Q8IVF4 4471 aa6.65□□□□□ -1.34
COL20A1-201ENST00000358894 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
COL20A1-201ENST00000358894 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
COL20A1-201ENST00000358894 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
COL20A1-201ENST00000358894 PLECQ15149 4684 aaKnown RBP6.59□□□□□ -1.35
COL20A1-201ENST00000358894 H0YAA0 97 aa6.58□□□□□ -1.36
COL20A1-201ENST00000358894 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
COL20A1-201ENST00000358894 ANK2Q01484 3957 aa6.55□□□□□ -1.36
COL20A1-201ENST00000358894 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
COL20A1-201ENST00000358894 R4GN34 69 aa6.5□□□□□ -1.37
COL20A1-201ENST00000358894 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
COL20A1-201ENST00000358894 M0QZ58 72 aa6.44□□□□□ -1.38
COL20A1-201ENST00000358894 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
COL20A1-201ENST00000358894 XP32Q5T750 250 aa6.43□□□□□ -1.38
COL20A1-201ENST00000358894 STARD9Q9P2P6 4700 aa6.42□□□□□ -1.38
COL20A1-201ENST00000358894 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
COL20A1-201ENST00000358894 DNAH11Q96DT5 4516 aa6.41□□□□□ -1.38
COL20A1-201ENST00000358894 P0C880 135 aa6.38□□□□□ -1.39
COL20A1-201ENST00000358894 DNHD1Q96M86 4753 aa6.37□□□□□ -1.39
COL20A1-201ENST00000358894 LYSTQ99698 3801 aa6.37□□□□□ -1.39
COL20A1-201ENST00000358894 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.39
COL20A1-201ENST00000358894 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
COL20A1-201ENST00000358894 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
COL20A1-201ENST00000358894 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
COL20A1-201ENST00000358894 M0R2T5 61 aa6.29□□□□□ -1.4
COL20A1-201ENST00000358894 CMYA5Q8N3K9 4069 aa6.28□□□□□ -1.4
COL20A1-201ENST00000358894 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
COL20A1-201ENST00000358894 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
COL20A1-201ENST00000358894 DNAH17Q9UFH2 4485 aa6.26□□□□□ -1.41
COL20A1-201ENST00000358894 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
COL20A1-201ENST00000358894 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
COL20A1-201ENST00000358894 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
COL20A1-201ENST00000358894 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
COL20A1-201ENST00000358894 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms