RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
SIRPA-202ENST00000358771 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
SIRPA-202ENST00000358771 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
SIRPA-202ENST00000358771 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
SIRPA-202ENST00000358771 PMAIP1Q13794 54 aa8.43□□□□□ -1.06
SIRPA-202ENST00000358771 C1orf195Q5TG92 126 aa8.43□□□□□ -1.06
SIRPA-202ENST00000358771 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
SIRPA-202ENST00000358771 ACYP2P14621 99 aa8.42□□□□□ -1.06
SIRPA-202ENST00000358771 SEC61GP60059 68 aa8.4□□□□□ -1.06
SIRPA-202ENST00000358771 CD164Q04900 197 aa8.39□□□□□ -1.07
SIRPA-202ENST00000358771 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
SIRPA-202ENST00000358771 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
SIRPA-202ENST00000358771 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
SIRPA-202ENST00000358771 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
SIRPA-202ENST00000358771 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
SIRPA-202ENST00000358771 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
SIRPA-202ENST00000358771 A0A1B0GU69 56 aa8.31□□□□□ -1.08
SIRPA-202ENST00000358771 Q5W150 140 aa8.29□□□□□ -1.08
SIRPA-202ENST00000358771 Q8N1X5 172 aa8.29□□□□□ -1.08
SIRPA-202ENST00000358771 HRES1P13985 223 aa8.29□□□□□ -1.08
SIRPA-202ENST00000358771 ANK2Q01484 3957 aa8.29□□□□□ -1.08
SIRPA-202ENST00000358771 LCE6AA0A183 80 aa8.28□□□□□ -1.08
SIRPA-202ENST00000358771 Q1T7F1 81 aa8.27□□□□□ -1.09
SIRPA-202ENST00000358771 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
SIRPA-202ENST00000358771 DNAH10Q8IVF4 4471 aa8.19□□□□□ -1.1
SIRPA-202ENST00000358771 Q5VV11 94 aa8.15□□□□□ -1.1
SIRPA-202ENST00000358771 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
SIRPA-202ENST00000358771 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
SIRPA-202ENST00000358771 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
SIRPA-202ENST00000358771 Q6ZSA8 131 aa8.1□□□□□ -1.11
SIRPA-202ENST00000358771 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
SIRPA-202ENST00000358771 SPINK7P58062 85 aa8.05□□□□□ -1.12
SIRPA-202ENST00000358771 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
SIRPA-202ENST00000358771 A8MU10 97 aa8.05□□□□□ -1.12
SIRPA-202ENST00000358771 UQCR11O14957 56 aa8.04□□□□□ -1.12
SIRPA-202ENST00000358771 ASB16-AS1Q495Z4 193 aa8.04□□□□□ -1.12
SIRPA-202ENST00000358771 Q75L30 129 aa8.03□□□□□ -1.12
SIRPA-202ENST00000358771 LYSTQ99698 3801 aa8.01□□□□□ -1.13
SIRPA-202ENST00000358771 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
SIRPA-202ENST00000358771 Q5VSD8 79 aa8□□□□□ -1.13
SIRPA-202ENST00000358771 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
SIRPA-202ENST00000358771 DMAC1Q96GE9 116 aa8□□□□□ -1.13
SIRPA-202ENST00000358771 K7ERS5 55 aa7.99□□□□□ -1.13
SIRPA-202ENST00000358771 DNHD1Q96M86 4753 aa7.98□□□□□ -1.13
SIRPA-202ENST00000358771 PRKDCP78527 4128 aaKnown RBP7.96□□□□□ -1.13
SIRPA-202ENST00000358771 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
SIRPA-202ENST00000358771 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
SIRPA-202ENST00000358771 LCA10Q71F78 164 aa7.93□□□□□ -1.14
SIRPA-202ENST00000358771 CMYA5Q8N3K9 4069 aa7.9□□□□□ -1.14
SIRPA-202ENST00000358771 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.15
SIRPA-202ENST00000358771 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
SIRPA-202ENST00000358771 J3QL48 77 aa7.84□□□□□ -1.15
SIRPA-202ENST00000358771 KMT2AQ03164 3969 aa7.84□□□□□ -1.15
SIRPA-202ENST00000358771 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.16
SIRPA-202ENST00000358771 KRTAP16-1A8MUX0 517 aa7.82□□□□□ -1.16
SIRPA-202ENST00000358771 A0A0D9SG42 100 aa7.81□□□□□ -1.16
SIRPA-202ENST00000358771 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
SIRPA-202ENST00000358771 A0A1B0GU33 70 aa7.78□□□□□ -1.16
SIRPA-202ENST00000358771 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
SIRPA-202ENST00000358771 DNAH7Q8WXX0 4024 aa7.78□□□□□ -1.16
SIRPA-202ENST00000358771 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
SIRPA-202ENST00000358771 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
SIRPA-202ENST00000358771 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
SIRPA-202ENST00000358771 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
SIRPA-202ENST00000358771 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
SIRPA-202ENST00000358771 A8MUU9 505 aa7.69□□□□□ -1.18
SIRPA-202ENST00000358771 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
SIRPA-202ENST00000358771 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
SIRPA-202ENST00000358771 RBM12B-AS1Q9P1G2 102 aa7.67□□□□□ -1.18
SIRPA-202ENST00000358771 LINC01554Q52M75 96 aa7.65□□□□□ -1.19
SIRPA-202ENST00000358771 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
SIRPA-202ENST00000358771 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
SIRPA-202ENST00000358771 S4R3F8 94 aa7.63□□□□□ -1.19
SIRPA-202ENST00000358771 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
SIRPA-202ENST00000358771 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
SIRPA-202ENST00000358771 FRAS1Q86XX4 4008 aa7.61□□□□□ -1.19
SIRPA-202ENST00000358771 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
SIRPA-202ENST00000358771 FAT1Q14517 4588 aa7.6□□□□□ -1.19
SIRPA-202ENST00000358771 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
SIRPA-202ENST00000358771 A6NN06 94 aa7.58□□□□□ -1.2
SIRPA-202ENST00000358771 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
SIRPA-202ENST00000358771 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
SIRPA-202ENST00000358771 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
SIRPA-202ENST00000358771 RPL37P61927 97 aaKnown RBP7.55□□□□□ -1.2
SIRPA-202ENST00000358771 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
SIRPA-202ENST00000358771 XP32Q5T750 250 aa7.52□□□□□ -1.21
SIRPA-202ENST00000358771 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
SIRPA-202ENST00000358771 DYNC2H1Q8NCM8 4307 aaKnown RBP7.47□□□□□ -1.21
SIRPA-202ENST00000358771 KRTAP10-8P60410 259 aa7.46□□□□□ -1.21
SIRPA-202ENST00000358771 HECTD4Q9Y4D8 3996 aa7.45□□□□□ -1.22
SIRPA-202ENST00000358771 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
SIRPA-202ENST00000358771 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
SIRPA-202ENST00000358771 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
SIRPA-202ENST00000358771 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
SIRPA-202ENST00000358771 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
SIRPA-202ENST00000358771 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
SIRPA-202ENST00000358771 H0YAA0 97 aa7.37□□□□□ -1.23
SIRPA-202ENST00000358771 R4GN34 69 aa7.35□□□□□ -1.23
SIRPA-202ENST00000358771 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
SIRPA-202ENST00000358771 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms