RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 UBE2DNLQ8IWF7 75 aa11.24□□□□□ -0.61
PRPF39-201ENST00000355765 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
PRPF39-201ENST00000355765 C14orf177Q52M58 125 aa11.21□□□□□ -0.61
PRPF39-201ENST00000355765 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
PRPF39-201ENST00000355765 ACYP2P14621 99 aa11.19□□□□□ -0.62
PRPF39-201ENST00000355765 WWC2-AS2Q96NR7 200 aa11.18□□□□□ -0.62
PRPF39-201ENST00000355765 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-201ENST00000355765 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
PRPF39-201ENST00000355765 KRTAP13-3Q3SY46 172 aa11.15□□□□□ -0.62
PRPF39-201ENST00000355765 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
PRPF39-201ENST00000355765 FRAS1Q86XX4 4008 aa11.15□□□□□ -0.62
PRPF39-201ENST00000355765 LINC00483Q53H64 154 aa11.14□□□□□ -0.63
PRPF39-201ENST00000355765 A0A1B0GU69 56 aa11.14□□□□□ -0.63
PRPF39-201ENST00000355765 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
PRPF39-201ENST00000355765 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
PRPF39-201ENST00000355765 LINC01554Q52M75 96 aa11.08□□□□□ -0.64
PRPF39-201ENST00000355765 DMAC1Q96GE9 116 aa11.07□□□□□ -0.64
PRPF39-201ENST00000355765 DNAH8Q96JB1 4490 aa11.07□□□□□ -0.64
PRPF39-201ENST00000355765 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
PRPF39-201ENST00000355765 ZNF706Q9Y5V0 76 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-201ENST00000355765 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
PRPF39-201ENST00000355765 RTL8CO15255 209 aa11.04□□□□□ -0.64
PRPF39-201ENST00000355765 SPATA8Q6RVD6 105 aa11.04□□□□□ -0.64
PRPF39-201ENST00000355765 MIR22HGQ0VDD5 57 aa11.02□□□□□ -0.64
PRPF39-201ENST00000355765 CIRBP-AS1Q8TBR5 109 aa11.02□□□□□ -0.64
PRPF39-201ENST00000355765 APLNQ9ULZ1 77 aa11.02□□□□□ -0.64
PRPF39-201ENST00000355765 IGLV5-52A0A0A0MRZ9 124 aa10.97□□□□□ -0.65
PRPF39-201ENST00000355765 DNHD1Q96M86 4753 aa10.96□□□□□ -0.65
PRPF39-201ENST00000355765 NBDYA0A0U1RRE5 68 aa10.96□□□□□ -0.65
PRPF39-201ENST00000355765 UQCR11O14957 56 aa10.96□□□□□ -0.65
PRPF39-201ENST00000355765 ZNF861PO60384 105 aa10.96□□□□□ -0.66
PRPF39-201ENST00000355765 PLECQ15149 4684 aaKnown RBP10.96□□□□□ -0.66
PRPF39-201ENST00000355765 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-201ENST00000355765 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
PRPF39-201ENST00000355765 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
PRPF39-201ENST00000355765 H3BS24 57 aa10.9□□□□□ -0.67
PRPF39-201ENST00000355765 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
PRPF39-201ENST00000355765 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
PRPF39-201ENST00000355765 PRKDCP78527 4128 aaKnown RBP10.88□□□□□ -0.67
PRPF39-201ENST00000355765 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
PRPF39-201ENST00000355765 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
PRPF39-201ENST00000355765 A0A087WTM6 91 aa10.82□□□□□ -0.68
PRPF39-201ENST00000355765 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
PRPF39-201ENST00000355765 DYNC2H1Q8NCM8 4307 aaKnown RBP10.8□□□□□ -0.68
PRPF39-201ENST00000355765 TGP01266 2768 aa10.8□□□□□ -0.68
PRPF39-201ENST00000355765 SPINK1P00995 79 aa10.79□□□□□ -0.68
PRPF39-201ENST00000355765 IGLV7-43P04211 117 aa10.76□□□□□ -0.69
PRPF39-201ENST00000355765 STARD9Q9P2P6 4700 aa10.71□□□□□ -0.69
PRPF39-201ENST00000355765 VPS13DQ5THJ4 4388 aa10.71□□□□□ -0.7
PRPF39-201ENST00000355765 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
PRPF39-201ENST00000355765 FBN3Q75N90 2809 aa10.7□□□□□ -0.7
PRPF39-201ENST00000355765 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
PRPF39-201ENST00000355765 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
PRPF39-201ENST00000355765 Q8N1X5 172 aa10.67□□□□□ -0.7
PRPF39-201ENST00000355765 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
PRPF39-201ENST00000355765 DNAH2Q9P225 4427 aa10.65□□□□□ -0.7
PRPF39-201ENST00000355765 KRTAP13-2Q52LG2 175 aa10.61□□□□□ -0.71
PRPF39-201ENST00000355765 C1orf134Q5TEV5 83 aa10.58□□□□□ -0.72
PRPF39-201ENST00000355765 DNAH6Q9C0G6 4158 aa10.55□□□□□ -0.72
PRPF39-201ENST00000355765 DNAH11Q96DT5 4516 aa10.55□□□□□ -0.72
PRPF39-201ENST00000355765 H0YAA0 97 aa10.55□□□□□ -0.72
PRPF39-201ENST00000355765 Q6ZSA8 131 aa10.54□□□□□ -0.72
PRPF39-201ENST00000355765 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
PRPF39-201ENST00000355765 A8MUU9 505 aa10.51□□□□□ -0.73
PRPF39-201ENST00000355765 TYMSOSQ8TAI1 123 aa10.5□□□□□ -0.73
PRPF39-201ENST00000355765 LY6G6CO95867 125 aa10.49□□□□□ -0.73
PRPF39-201ENST00000355765 LINC00304Q8N9R0 145 aa10.49□□□□□ -0.73
PRPF39-201ENST00000355765 KRTAP25-1Q3LHN0 102 aa10.48□□□□□ -0.73
PRPF39-201ENST00000355765 CRIPTQ9P021 101 aa10.44□□□□□ -0.74
PRPF39-201ENST00000355765 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
PRPF39-201ENST00000355765 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.75
PRPF39-201ENST00000355765 ROMO1P60602 79 aa10.39□□□□□ -0.75
PRPF39-201ENST00000355765 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PRPF39-201ENST00000355765 A0A1B0GU33 70 aa10.38□□□□□ -0.75
PRPF39-201ENST00000355765 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
PRPF39-201ENST00000355765 KRTAP1-4P0C5Y4 121 aa10.33□□□□□ -0.76
PRPF39-201ENST00000355765 H1FX-AS1Q4G0G2 97 aa10.3□□□□□ -0.76
PRPF39-201ENST00000355765 VPS13BQ7Z7G8 4022 aa10.25□□□□□ -0.77
PRPF39-201ENST00000355765 KRTAP3-1Q9BYR8 98 aa10.25□□□□□ -0.77
PRPF39-201ENST00000355765 HYDINQ4G0P3 5121 aa10.25□□□□□ -0.77
PRPF39-201ENST00000355765 KRTAP10-1P60331 282 aa10.21□□□□□ -0.77
PRPF39-201ENST00000355765 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
PRPF39-201ENST00000355765 P0C880 135 aa10.16□□□□□ -0.78
PRPF39-201ENST00000355765 K7ERS5 55 aa10.14□□□□□ -0.79
PRPF39-201ENST00000355765 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
PRPF39-201ENST00000355765 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
PRPF39-201ENST00000355765 PKD1P98161 4303 aa10.07□□□□□ -0.8
PRPF39-201ENST00000355765 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-201ENST00000355765 C20orf166-AS1Q96NR2 134 aa10□□□□□ -0.81
PRPF39-201ENST00000355765 SACSQ9NZJ4 4579 aa9.99□□□□□ -0.81
PRPF39-201ENST00000355765 A0A0D9SG42 100 aa9.98□□□□□ -0.81
PRPF39-201ENST00000355765 SPINT4Q6UDR6 99 aa9.97□□□□□ -0.81
PRPF39-201ENST00000355765 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
PRPF39-201ENST00000355765 TPRXLQ17RH7 258 aa9.94□□□□□ -0.82
PRPF39-201ENST00000355765 RPL37P61927 97 aaKnown RBP9.91□□□□□ -0.82
PRPF39-201ENST00000355765 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
PRPF39-201ENST00000355765 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
PRPF39-201ENST00000355765 RPS29P62273 56 aaKnown RBP9.88□□□□□ -0.83
PRPF39-201ENST00000355765 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
PRPF39-201ENST00000355765 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms