RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 Q75L30 129 aa8.71□□□□□ -1.02
PDLIM7-201ENST00000355572 A0A1B0GV72 72 aa8.69□□□□□ -1.02
PDLIM7-201ENST00000355572 PDE6GP18545 87 aa8.67□□□□□ -1.02
PDLIM7-201ENST00000355572 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
PDLIM7-201ENST00000355572 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
PDLIM7-201ENST00000355572 DSCR10P59022 87 aa8.65□□□□□ -1.02
PDLIM7-201ENST00000355572 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
PDLIM7-201ENST00000355572 C20orf166-AS1Q96NR2 134 aa8.65□□□□□ -1.02
PDLIM7-201ENST00000355572 A8MUU9 505 aa8.64□□□□□ -1.03
PDLIM7-201ENST00000355572 C14orf132Q9NPU4 83 aa8.64□□□□□ -1.03
PDLIM7-201ENST00000355572 RBM3P98179 157 aaKnown RBP8.63□□□□□ -1.03
PDLIM7-201ENST00000355572 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
PDLIM7-201ENST00000355572 CCKP06307 115 aa8.62□□□□□ -1.03
PDLIM7-201ENST00000355572 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
PDLIM7-201ENST00000355572 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
PDLIM7-201ENST00000355572 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
PDLIM7-201ENST00000355572 TRBV7-4A0A0J9YYF1 115 aa8.6□□□□□ -1.03
PDLIM7-201ENST00000355572 M0R2T5 61 aa8.6□□□□□ -1.03
PDLIM7-201ENST00000355572 DSCR8Q96T75 97 aa8.6□□□□□ -1.03
PDLIM7-201ENST00000355572 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
PDLIM7-201ENST00000355572 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.03
PDLIM7-201ENST00000355572 Q6ZQT0 140 aa8.59□□□□□ -1.03
PDLIM7-201ENST00000355572 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
PDLIM7-201ENST00000355572 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
PDLIM7-201ENST00000355572 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
PDLIM7-201ENST00000355572 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
PDLIM7-201ENST00000355572 A0A1B0GW54 56 aa8.54□□□□□ -1.04
PDLIM7-201ENST00000355572 IGKV4-1P06312 121 aa8.54□□□□□ -1.04
PDLIM7-201ENST00000355572 ATP5EP2Q5VTU8 51 aa8.51□□□□□ -1.05
PDLIM7-201ENST00000355572 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
PDLIM7-201ENST00000355572 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
PDLIM7-201ENST00000355572 LINC00846Q9NV44 126 aa8.5□□□□□ -1.05
PDLIM7-201ENST00000355572 LINC00313P59037 77 aa8.49□□□□□ -1.05
PDLIM7-201ENST00000355572 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
PDLIM7-201ENST00000355572 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
PDLIM7-201ENST00000355572 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
PDLIM7-201ENST00000355572 HRES1P13985 223 aa8.43□□□□□ -1.06
PDLIM7-201ENST00000355572 MPLKIPQ8TAP9 179 aa8.41□□□□□ -1.06
PDLIM7-201ENST00000355572 Q6ZVQ6 151 aa8.4□□□□□ -1.06
PDLIM7-201ENST00000355572 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
PDLIM7-201ENST00000355572 CXCL6P80162 114 aa8.39□□□□□ -1.07
PDLIM7-201ENST00000355572 PCP4P48539 62 aa8.33□□□□□ -1.08
PDLIM7-201ENST00000355572 NREPQ16612 68 aa8.33□□□□□ -1.08
PDLIM7-201ENST00000355572 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
PDLIM7-201ENST00000355572 MT2AP02795 61 aa8.32□□□□□ -1.08
PDLIM7-201ENST00000355572 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
PDLIM7-201ENST00000355572 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
PDLIM7-201ENST00000355572 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
PDLIM7-201ENST00000355572 HIST1H4AP62805 103 aaKnown RBP8.29□□□□□ -1.08
PDLIM7-201ENST00000355572 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
PDLIM7-201ENST00000355572 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
PDLIM7-201ENST00000355572 MT1FP04733 61 aa8.27□□□□□ -1.09
PDLIM7-201ENST00000355572 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
PDLIM7-201ENST00000355572 BPY2O14599 106 aa8.26□□□□□ -1.09
PDLIM7-201ENST00000355572 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
PDLIM7-201ENST00000355572 J3KT08 172 aa8.24□□□□□ -1.09
PDLIM7-201ENST00000355572 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
PDLIM7-201ENST00000355572 USH2AO75445 5202 aa8.23□□□□□ -1.09
PDLIM7-201ENST00000355572 ATOX1O00244 68 aa8.23□□□□□ -1.09
PDLIM7-201ENST00000355572 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
PDLIM7-201ENST00000355572 A8MWP4 228 aa8.22□□□□□ -1.09
PDLIM7-201ENST00000355572 SPINK7P58062 85 aa8.22□□□□□ -1.09
PDLIM7-201ENST00000355572 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
PDLIM7-201ENST00000355572 LCE2BO14633 110 aa8.2□□□□□ -1.1
PDLIM7-201ENST00000355572 SSPOA2VEC9 5147 aa8.19□□□□□ -1.1
PDLIM7-201ENST00000355572 A0A087WVE0 104 aa8.19□□□□□ -1.1
PDLIM7-201ENST00000355572 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
PDLIM7-201ENST00000355572 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
PDLIM7-201ENST00000355572 NDUFB1O75438 58 aa8.16□□□□□ -1.1
PDLIM7-201ENST00000355572 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
PDLIM7-201ENST00000355572 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
PDLIM7-201ENST00000355572 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
PDLIM7-201ENST00000355572 K7EQZ3 153 aa8.11□□□□□ -1.11
PDLIM7-201ENST00000355572 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
PDLIM7-201ENST00000355572 SERP2Q8N6R1 65 aa8.09□□□□□ -1.11
PDLIM7-201ENST00000355572 UQCRQO14949 82 aa8.08□□□□□ -1.12
PDLIM7-201ENST00000355572 COX7CP15954 63 aa8.08□□□□□ -1.12
PDLIM7-201ENST00000355572 Q8N9L7 120 aa8.08□□□□□ -1.12
PDLIM7-201ENST00000355572 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
PDLIM7-201ENST00000355572 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
PDLIM7-201ENST00000355572 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
PDLIM7-201ENST00000355572 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
PDLIM7-201ENST00000355572 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
PDLIM7-201ENST00000355572 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
PDLIM7-201ENST00000355572 Q5W150 140 aa8.02□□□□□ -1.13
PDLIM7-201ENST00000355572 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
PDLIM7-201ENST00000355572 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
PDLIM7-201ENST00000355572 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
PDLIM7-201ENST00000355572 OCR1Q9BZK8 76 aa7.99□□□□□ -1.13
PDLIM7-201ENST00000355572 NDUFS5O43920 106 aa7.97□□□□□ -1.13
PDLIM7-201ENST00000355572 CASC2Q6XLA1 102 aa7.96□□□□□ -1.14
PDLIM7-201ENST00000355572 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
PDLIM7-201ENST00000355572 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
PDLIM7-201ENST00000355572 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
PDLIM7-201ENST00000355572 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
PDLIM7-201ENST00000355572 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
PDLIM7-201ENST00000355572 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
PDLIM7-201ENST00000355572 C5orf47Q569G3 176 aa7.87□□□□□ -1.15
PDLIM7-201ENST00000355572 NDUFC1O43677 76 aa7.86□□□□□ -1.15
PDLIM7-201ENST00000355572 C20orf197Q8N268 126 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms