RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 H0Y9P7 68 aa6.77□□□□□ -1.33
SND1-201ENST00000354725 Q8N377 158 aa6.77□□□□□ -1.33
SND1-201ENST00000354725 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
SND1-201ENST00000354725 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
SND1-201ENST00000354725 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
SND1-201ENST00000354725 K7ERS5 55 aa6.76□□□□□ -1.33
SND1-201ENST00000354725 HTN3P15516 51 aa6.75□□□□□ -1.33
SND1-201ENST00000354725 DNAH10OSP0CZ25 163 aa6.75□□□□□ -1.33
SND1-201ENST00000354725 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
SND1-201ENST00000354725 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
SND1-201ENST00000354725 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
SND1-201ENST00000354725 WFDC13Q8IUB5 93 aa6.73□□□□□ -1.33
SND1-201ENST00000354725 SPRR4Q96PI1 79 aa6.73□□□□□ -1.33
SND1-201ENST00000354725 Q6ZRX8 168 aa6.73□□□□□ -1.33
SND1-201ENST00000354725 IGLV1-50A0A075B6I6 118 aa6.72□□□□□ -1.33
SND1-201ENST00000354725 APLNQ9ULZ1 77 aa6.71□□□□□ -1.34
SND1-201ENST00000354725 Q8NBF4 154 aa6.68□□□□□ -1.34
SND1-201ENST00000354725 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
SND1-201ENST00000354725 NUPR2A6NF83 97 aa6.67□□□□□ -1.34
SND1-201ENST00000354725 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
SND1-201ENST00000354725 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
SND1-201ENST00000354725 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
SND1-201ENST00000354725 FLG2Q5D862 2391 aaPredicted RBP6.66□□□□□ -1.34
SND1-201ENST00000354725 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
SND1-201ENST00000354725 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
SND1-201ENST00000354725 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
SND1-201ENST00000354725 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
SND1-201ENST00000354725 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
SND1-201ENST00000354725 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
SND1-201ENST00000354725 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
SND1-201ENST00000354725 HRES1P13985 223 aa6.63□□□□□ -1.35
SND1-201ENST00000354725 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
SND1-201ENST00000354725 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
SND1-201ENST00000354725 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
SND1-201ENST00000354725 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
SND1-201ENST00000354725 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
SND1-201ENST00000354725 NOTCH2NLQ7Z3S9 236 aa6.61□□□□□ -1.35
SND1-201ENST00000354725 LINC00483Q53H64 154 aa6.58□□□□□ -1.36
SND1-201ENST00000354725 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
SND1-201ENST00000354725 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
SND1-201ENST00000354725 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
SND1-201ENST00000354725 SPRR1BP22528 89 aa6.54□□□□□ -1.36
SND1-201ENST00000354725 ZNF861PO60384 105 aa6.53□□□□□ -1.36
SND1-201ENST00000354725 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
SND1-201ENST00000354725 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
SND1-201ENST00000354725 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
SND1-201ENST00000354725 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
SND1-201ENST00000354725 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
SND1-201ENST00000354725 A0A096LNI7 61 aa6.49□□□□□ -1.37
SND1-201ENST00000354725 A8MUU9 505 aa6.49□□□□□ -1.37
SND1-201ENST00000354725 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
SND1-201ENST00000354725 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
SND1-201ENST00000354725 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
SND1-201ENST00000354725 KRTAP11-1Q8IUC1 163 aa6.49□□□□□ -1.37
SND1-201ENST00000354725 A0A1B0GU69 56 aa6.47□□□□□ -1.37
SND1-201ENST00000354725 UQCR11O14957 56 aa6.47□□□□□ -1.37
SND1-201ENST00000354725 KRTAP13-1Q8IUC0 172 aa6.46□□□□□ -1.37
SND1-201ENST00000354725 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.37
SND1-201ENST00000354725 LY6G6CO95867 125 aa6.46□□□□□ -1.38
SND1-201ENST00000354725 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
SND1-201ENST00000354725 A0A0G2JQZ4 141 aa6.46□□□□□ -1.38
SND1-201ENST00000354725 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
SND1-201ENST00000354725 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
SND1-201ENST00000354725 A0A087WSZ3 146 aa6.45□□□□□ -1.38
SND1-201ENST00000354725 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
SND1-201ENST00000354725 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SND1-201ENST00000354725 PRLHP81277 87 aa6.44□□□□□ -1.38
SND1-201ENST00000354725 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
SND1-201ENST00000354725 HSPG2P98160 4391 aa6.43□□□□□ -1.38
SND1-201ENST00000354725 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
SND1-201ENST00000354725 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
SND1-201ENST00000354725 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
SND1-201ENST00000354725 Q96NJ1 140 aa6.4□□□□□ -1.39
SND1-201ENST00000354725 UBE2DNLQ8IWF7 75 aa6.39□□□□□ -1.39
SND1-201ENST00000354725 RYR1P21817 5038 aa6.39□□□□□ -1.39
SND1-201ENST00000354725 ACYP2P14621 99 aa6.37□□□□□ -1.39
SND1-201ENST00000354725 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
SND1-201ENST00000354725 HERC2O95714 4834 aa6.35□□□□□ -1.39
SND1-201ENST00000354725 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
SND1-201ENST00000354725 PANO1I0J062 215 aa6.33□□□□□ -1.4
SND1-201ENST00000354725 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
SND1-201ENST00000354725 DMAC1Q96GE9 116 aa6.31□□□□□ -1.4
SND1-201ENST00000354725 A0A087WTM6 91 aa6.29□□□□□ -1.4
SND1-201ENST00000354725 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
SND1-201ENST00000354725 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
SND1-201ENST00000354725 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
SND1-201ENST00000354725 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
SND1-201ENST00000354725 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
SND1-201ENST00000354725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
SND1-201ENST00000354725 KRTAP13-3Q3SY46 172 aa6.24□□□□□ -1.41
SND1-201ENST00000354725 FAT1Q14517 4588 aa6.24□□□□□ -1.41
SND1-201ENST00000354725 Q6ZSA8 131 aa6.21□□□□□ -1.42
SND1-201ENST00000354725 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
SND1-201ENST00000354725 Q5W150 140 aa6.19□□□□□ -1.42
SND1-201ENST00000354725 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
SND1-201ENST00000354725 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
SND1-201ENST00000354725 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
SND1-201ENST00000354725 PSORS1C2Q9UIG4 136 aa6.16□□□□□ -1.42
SND1-201ENST00000354725 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
SND1-201ENST00000354725 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms