RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
PTBP1-201ENST00000349038 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
PTBP1-201ENST00000349038 KRTAP1-5Q9BYS1 174 aa9.15□□□□□ -0.95
PTBP1-201ENST00000349038 SPRR1BP22528 89 aa9.14□□□□□ -0.95
PTBP1-201ENST00000349038 PANO1I0J062 215 aa9.13□□□□□ -0.95
PTBP1-201ENST00000349038 A0A1B0GVX0 72 aa9.12□□□□□ -0.95
PTBP1-201ENST00000349038 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
PTBP1-201ENST00000349038 RTL8CO15255 209 aa9.1□□□□□ -0.95
PTBP1-201ENST00000349038 ACYP2P14621 99 aa9.09□□□□□ -0.95
PTBP1-201ENST00000349038 TGP01266 2768 aa9.09□□□□□ -0.95
PTBP1-201ENST00000349038 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
PTBP1-201ENST00000349038 PLAC8Q9NZF1 115 aa9.07□□□□□ -0.96
PTBP1-201ENST00000349038 Q96NJ1 140 aa9.06□□□□□ -0.96
PTBP1-201ENST00000349038 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
PTBP1-201ENST00000349038 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
PTBP1-201ENST00000349038 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
PTBP1-201ENST00000349038 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
PTBP1-201ENST00000349038 Q6ZR54 194 aa9.04□□□□□ -0.96
PTBP1-201ENST00000349038 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
PTBP1-201ENST00000349038 UQCR11O14957 56 aa8.99□□□□□ -0.97
PTBP1-201ENST00000349038 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
PTBP1-201ENST00000349038 KRTAP13-1Q8IUC0 172 aa8.97□□□□□ -0.97
PTBP1-201ENST00000349038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
PTBP1-201ENST00000349038 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
PTBP1-201ENST00000349038 C14orf177Q52M58 125 aa8.96□□□□□ -0.97
PTBP1-201ENST00000349038 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.97
PTBP1-201ENST00000349038 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
PTBP1-201ENST00000349038 C1orf134Q5TEV5 83 aa8.92□□□□□ -0.98
PTBP1-201ENST00000349038 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.98
PTBP1-201ENST00000349038 Q8N1X5 172 aa8.88□□□□□ -0.99
PTBP1-201ENST00000349038 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
PTBP1-201ENST00000349038 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
PTBP1-201ENST00000349038 WWC2-AS2Q96NR7 200 aa8.86□□□□□ -0.99
PTBP1-201ENST00000349038 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
PTBP1-201ENST00000349038 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
PTBP1-201ENST00000349038 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
PTBP1-201ENST00000349038 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
PTBP1-201ENST00000349038 DMAC1Q96GE9 116 aa8.81□□□□□ -1
PTBP1-201ENST00000349038 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
PTBP1-201ENST00000349038 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
PTBP1-201ENST00000349038 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
PTBP1-201ENST00000349038 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
PTBP1-201ENST00000349038 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
PTBP1-201ENST00000349038 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
PTBP1-201ENST00000349038 ZNF861PO60384 105 aa8.73□□□□□ -1.01
PTBP1-201ENST00000349038 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
PTBP1-201ENST00000349038 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
PTBP1-201ENST00000349038 PLECQ15149 4684 aaKnown RBP8.69□□□□□ -1.02
PTBP1-201ENST00000349038 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
PTBP1-201ENST00000349038 DNAH8Q96JB1 4490 aa8.68□□□□□ -1.02
PTBP1-201ENST00000349038 A0A087WTM6 91 aa8.63□□□□□ -1.03
PTBP1-201ENST00000349038 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
PTBP1-201ENST00000349038 HECTD4Q9Y4D8 3996 aa8.61□□□□□ -1.03
PTBP1-201ENST00000349038 ALMS1Q8TCU4 4167 aa8.61□□□□□ -1.03
PTBP1-201ENST00000349038 ROMO1P60602 79 aa8.61□□□□□ -1.03
PTBP1-201ENST00000349038 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
PTBP1-201ENST00000349038 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
PTBP1-201ENST00000349038 NUPR2A6NF83 97 aa8.59□□□□□ -1.04
PTBP1-201ENST00000349038 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
PTBP1-201ENST00000349038 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
PTBP1-201ENST00000349038 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
PTBP1-201ENST00000349038 H0YAA0 97 aa8.55□□□□□ -1.04
PTBP1-201ENST00000349038 Q6ZSA8 131 aa8.55□□□□□ -1.04
PTBP1-201ENST00000349038 A8MUU9 505 aa8.54□□□□□ -1.04
PTBP1-201ENST00000349038 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
PTBP1-201ENST00000349038 A0A1B0GU33 70 aa8.51□□□□□ -1.05
PTBP1-201ENST00000349038 STARD9Q9P2P6 4700 aa8.5□□□□□ -1.05
PTBP1-201ENST00000349038 A0A0D9SG42 100 aa8.49□□□□□ -1.05
PTBP1-201ENST00000349038 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
PTBP1-201ENST00000349038 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
PTBP1-201ENST00000349038 LY6G6CO95867 125 aa8.44□□□□□ -1.06
PTBP1-201ENST00000349038 K7ERS5 55 aa8.43□□□□□ -1.06
PTBP1-201ENST00000349038 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
PTBP1-201ENST00000349038 P0C880 135 aa8.41□□□□□ -1.06
PTBP1-201ENST00000349038 KRTAP16-1A8MUX0 517 aa8.4□□□□□ -1.06
PTBP1-201ENST00000349038 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
PTBP1-201ENST00000349038 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
PTBP1-201ENST00000349038 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
PTBP1-201ENST00000349038 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
PTBP1-201ENST00000349038 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
PTBP1-201ENST00000349038 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
PTBP1-201ENST00000349038 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
PTBP1-201ENST00000349038 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
PTBP1-201ENST00000349038 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
PTBP1-201ENST00000349038 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
PTBP1-201ENST00000349038 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
PTBP1-201ENST00000349038 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.1
PTBP1-201ENST00000349038 LRP1BQ9NZR2 4599 aa8.19□□□□□ -1.1
PTBP1-201ENST00000349038 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
PTBP1-201ENST00000349038 RYR2Q92736 4967 aa8.16□□□□□ -1.1
PTBP1-201ENST00000349038 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
PTBP1-201ENST00000349038 RYR3Q15413 4870 aa8.16□□□□□ -1.1
PTBP1-201ENST00000349038 KRTAP10-1P60331 282 aa8.15□□□□□ -1.11
PTBP1-201ENST00000349038 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
PTBP1-201ENST00000349038 PKD1P98161 4303 aa8.1□□□□□ -1.11
PTBP1-201ENST00000349038 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
PTBP1-201ENST00000349038 HYDINQ4G0P3 5121 aa8.08□□□□□ -1.12
PTBP1-201ENST00000349038 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
PTBP1-201ENST00000349038 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
PTBP1-201ENST00000349038 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms