RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 STAB2Q8WWQ8 2551 aa9.09□□□□□ -0.95
LMNA-201ENST00000347559 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
LMNA-201ENST00000347559 MIR22HGQ0VDD5 57 aa9.07□□□□□ -0.96
LMNA-201ENST00000347559 RTL8CO15255 209 aa9.06□□□□□ -0.96
LMNA-201ENST00000347559 WWC2-AS2Q96NR7 200 aa9.05□□□□□ -0.96
LMNA-201ENST00000347559 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
LMNA-201ENST00000347559 LYSTQ99698 3801 aa9.05□□□□□ -0.96
LMNA-201ENST00000347559 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
LMNA-201ENST00000347559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
LMNA-201ENST00000347559 UQCR11O14957 56 aa9.03□□□□□ -0.96
LMNA-201ENST00000347559 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
LMNA-201ENST00000347559 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
LMNA-201ENST00000347559 J3QKU1 62 aa9.02□□□□□ -0.97
LMNA-201ENST00000347559 LINC00483Q53H64 154 aa9□□□□□ -0.97
LMNA-201ENST00000347559 CIRBP-AS1Q8TBR5 109 aa9□□□□□ -0.97
LMNA-201ENST00000347559 ZNF706Q9Y5V0 76 aaPredicted RBP8.99□□□□□ -0.97
LMNA-201ENST00000347559 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.97
LMNA-201ENST00000347559 PSORS1C2Q9UIG4 136 aa8.96□□□□□ -0.98
LMNA-201ENST00000347559 MGAM2Q2M2H8 2515 aa8.95□□□□□ -0.98
LMNA-201ENST00000347559 SPACA4Q8TDM5 124 aa8.92□□□□□ -0.98
LMNA-201ENST00000347559 KRTAP24-1Q3LI83 254 aa8.91□□□□□ -0.98
LMNA-201ENST00000347559 ALMS1Q8TCU4 4167 aa8.91□□□□□ -0.98
LMNA-201ENST00000347559 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
LMNA-201ENST00000347559 IGKV2-30P06310 120 aa8.89□□□□□ -0.99
LMNA-201ENST00000347559 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
LMNA-201ENST00000347559 SPINK1P00995 79 aa8.89□□□□□ -0.99
LMNA-201ENST00000347559 ZNF861PO60384 105 aa8.88□□□□□ -0.99
LMNA-201ENST00000347559 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
LMNA-201ENST00000347559 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
LMNA-201ENST00000347559 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
LMNA-201ENST00000347559 NBDYA0A0U1RRE5 68 aa8.85□□□□□ -0.99
LMNA-201ENST00000347559 TGP01266 2768 aa8.8□□□□□ -1
LMNA-201ENST00000347559 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
LMNA-201ENST00000347559 CMYA5Q8N3K9 4069 aa8.78□□□□□ -1
LMNA-201ENST00000347559 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
LMNA-201ENST00000347559 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
LMNA-201ENST00000347559 IGLV7-43P04211 117 aa8.76□□□□□ -1.01
LMNA-201ENST00000347559 DNAH7Q8WXX0 4024 aa8.75□□□□□ -1.01
LMNA-201ENST00000347559 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
LMNA-201ENST00000347559 MEGF8Q7Z7M0 2845 aa8.74□□□□□ -1.01
LMNA-201ENST00000347559 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
LMNA-201ENST00000347559 A0A087WTM6 91 aa8.73□□□□□ -1.01
LMNA-201ENST00000347559 Q8N1X5 172 aa8.73□□□□□ -1.01
LMNA-201ENST00000347559 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.02
LMNA-201ENST00000347559 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
LMNA-201ENST00000347559 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.03
LMNA-201ENST00000347559 CRIPTQ9P021 101 aa8.65□□□□□ -1.03
LMNA-201ENST00000347559 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
LMNA-201ENST00000347559 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
LMNA-201ENST00000347559 H0YAA0 97 aa8.62□□□□□ -1.03
LMNA-201ENST00000347559 Q6ZSA8 131 aa8.62□□□□□ -1.03
LMNA-201ENST00000347559 A8MUU9 505 aa8.61□□□□□ -1.03
LMNA-201ENST00000347559 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
LMNA-201ENST00000347559 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
LMNA-201ENST00000347559 ROMO1P60602 79 aa8.6□□□□□ -1.03
LMNA-201ENST00000347559 LY6G6CO95867 125 aa8.59□□□□□ -1.03
LMNA-201ENST00000347559 KRTAP13-2Q52LG2 175 aa8.57□□□□□ -1.04
LMNA-201ENST00000347559 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
LMNA-201ENST00000347559 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
LMNA-201ENST00000347559 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
LMNA-201ENST00000347559 A0A1B0GU33 70 aa8.52□□□□□ -1.05
LMNA-201ENST00000347559 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
LMNA-201ENST00000347559 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
LMNA-201ENST00000347559 K7ERS5 55 aa8.39□□□□□ -1.07
LMNA-201ENST00000347559 P0C880 135 aa8.38□□□□□ -1.07
LMNA-201ENST00000347559 VPS13DQ5THJ4 4388 aa8.38□□□□□ -1.07
LMNA-201ENST00000347559 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
LMNA-201ENST00000347559 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
LMNA-201ENST00000347559 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
LMNA-201ENST00000347559 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
LMNA-201ENST00000347559 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
LMNA-201ENST00000347559 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
LMNA-201ENST00000347559 DNAH2Q9P225 4427 aa8.32□□□□□ -1.08
LMNA-201ENST00000347559 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
LMNA-201ENST00000347559 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
LMNA-201ENST00000347559 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
LMNA-201ENST00000347559 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
LMNA-201ENST00000347559 COX6B2Q6YFQ2 88 aa8.28□□□□□ -1.08
LMNA-201ENST00000347559 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
LMNA-201ENST00000347559 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
LMNA-201ENST00000347559 KRTAP10-1P60331 282 aa8.22□□□□□ -1.09
LMNA-201ENST00000347559 A0A0D9SG42 100 aa8.22□□□□□ -1.09
LMNA-201ENST00000347559 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
LMNA-201ENST00000347559 TPRXLQ17RH7 258 aa8.15□□□□□ -1.11
LMNA-201ENST00000347559 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
LMNA-201ENST00000347559 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
LMNA-201ENST00000347559 NDUFAF8A1L188 74 aa8.12□□□□□ -1.11
LMNA-201ENST00000347559 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
LMNA-201ENST00000347559 C20orf166-AS1Q96NR2 134 aa8.08□□□□□ -1.12
LMNA-201ENST00000347559 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
LMNA-201ENST00000347559 KRTAP13-4Q3LI77 160 aa8.07□□□□□ -1.12
LMNA-201ENST00000347559 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
LMNA-201ENST00000347559 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
LMNA-201ENST00000347559 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
LMNA-201ENST00000347559 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
LMNA-201ENST00000347559 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
LMNA-201ENST00000347559 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
LMNA-201ENST00000347559 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
LMNA-201ENST00000347559 S4R3F8 94 aa7.88□□□□□ -1.15
LMNA-201ENST00000347559 PKD1P98161 4303 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms