RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 DNHD1Q96M86 4753 aa5.24□□□□□ -1.57
SKAP2-201ENST00000345317 A8MWP4 228 aa5.24□□□□□ -1.57
SKAP2-201ENST00000345317 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
SKAP2-201ENST00000345317 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
SKAP2-201ENST00000345317 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
SKAP2-201ENST00000345317 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
SKAP2-201ENST00000345317 LCE6AA0A183 80 aa5.22□□□□□ -1.57
SKAP2-201ENST00000345317 A6NN06 94 aa5.21□□□□□ -1.58
SKAP2-201ENST00000345317 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
SKAP2-201ENST00000345317 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
SKAP2-201ENST00000345317 LINC00313P59037 77 aa5.2□□□□□ -1.58
SKAP2-201ENST00000345317 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
SKAP2-201ENST00000345317 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
SKAP2-201ENST00000345317 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
SKAP2-201ENST00000345317 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
SKAP2-201ENST00000345317 A0A087X002 238 aa5.18□□□□□ -1.58
SKAP2-201ENST00000345317 SPINK7P58062 85 aa5.18□□□□□ -1.58
SKAP2-201ENST00000345317 Q96NJ1 140 aa5.17□□□□□ -1.58
SKAP2-201ENST00000345317 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
SKAP2-201ENST00000345317 SPRR1BP22528 89 aa5.17□□□□□ -1.58
SKAP2-201ENST00000345317 KRTAP21-3Q3LHN1 58 aa5.17□□□□□ -1.58
SKAP2-201ENST00000345317 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
SKAP2-201ENST00000345317 DNAH9Q9NYC9 4486 aa5.15□□□□□ -1.58
SKAP2-201ENST00000345317 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.58
SKAP2-201ENST00000345317 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
SKAP2-201ENST00000345317 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
SKAP2-201ENST00000345317 LINC00472Q9H8W2 130 aa5.14□□□□□ -1.59
SKAP2-201ENST00000345317 A0A1B0GU69 56 aa5.13□□□□□ -1.59
SKAP2-201ENST00000345317 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
SKAP2-201ENST00000345317 SPINK1P00995 79 aa5.12□□□□□ -1.59
SKAP2-201ENST00000345317 KRTAP13-1Q8IUC0 172 aa5.12□□□□□ -1.59
SKAP2-201ENST00000345317 PLECQ15149 4684 aaKnown RBP5.12□□□□□ -1.59
SKAP2-201ENST00000345317 DNAH10Q8IVF4 4471 aa5.12□□□□□ -1.59
SKAP2-201ENST00000345317 TP53AIP1Q9HCN2 124 aa5.11□□□□□ -1.59
SKAP2-201ENST00000345317 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
SKAP2-201ENST00000345317 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
SKAP2-201ENST00000345317 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
SKAP2-201ENST00000345317 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.6
SKAP2-201ENST00000345317 LINC00483Q53H64 154 aa5.08□□□□□ -1.6
SKAP2-201ENST00000345317 LYSTQ99698 3801 aa5.07□□□□□ -1.6
SKAP2-201ENST00000345317 ACYP2P14621 99 aa5.07□□□□□ -1.6
SKAP2-201ENST00000345317 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
SKAP2-201ENST00000345317 HRES1P13985 223 aa5.06□□□□□ -1.6
SKAP2-201ENST00000345317 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
SKAP2-201ENST00000345317 Q5VSD8 79 aa5.05□□□□□ -1.6
SKAP2-201ENST00000345317 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
SKAP2-201ENST00000345317 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
SKAP2-201ENST00000345317 UQCR11O14957 56 aa5.04□□□□□ -1.6
SKAP2-201ENST00000345317 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
SKAP2-201ENST00000345317 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
SKAP2-201ENST00000345317 Q6ZSA8 131 aa5.01□□□□□ -1.61
SKAP2-201ENST00000345317 J3QL48 77 aa4.99□□□□□ -1.61
SKAP2-201ENST00000345317 Q8N1X5 172 aa4.98□□□□□ -1.61
SKAP2-201ENST00000345317 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
SKAP2-201ENST00000345317 Q5W150 140 aa4.95□□□□□ -1.62
SKAP2-201ENST00000345317 KRTAP1-4P0C5Y4 121 aa4.95□□□□□ -1.62
SKAP2-201ENST00000345317 DNAH1Q9P2D7 4330 aa4.94□□□□□ -1.62
SKAP2-201ENST00000345317 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
SKAP2-201ENST00000345317 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
SKAP2-201ENST00000345317 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
SKAP2-201ENST00000345317 K7ERS5 55 aa4.93□□□□□ -1.62
SKAP2-201ENST00000345317 ASB16-AS1Q495Z4 193 aa4.91□□□□□ -1.62
SKAP2-201ENST00000345317 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
SKAP2-201ENST00000345317 VPS13DQ5THJ4 4388 aa4.87□□□□□ -1.63
SKAP2-201ENST00000345317 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
SKAP2-201ENST00000345317 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
SKAP2-201ENST00000345317 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
SKAP2-201ENST00000345317 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
SKAP2-201ENST00000345317 DMAC1Q96GE9 116 aa4.8□□□□□ -1.64
SKAP2-201ENST00000345317 FAT1Q14517 4588 aa4.8□□□□□ -1.64
SKAP2-201ENST00000345317 ROMO1P60602 79 aa4.8□□□□□ -1.64
SKAP2-201ENST00000345317 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
SKAP2-201ENST00000345317 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
SKAP2-201ENST00000345317 DNAH2Q9P225 4427 aa4.78□□□□□ -1.64
SKAP2-201ENST00000345317 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
SKAP2-201ENST00000345317 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
SKAP2-201ENST00000345317 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
SKAP2-201ENST00000345317 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
SKAP2-201ENST00000345317 COX6B2Q6YFQ2 88 aa4.73□□□□□ -1.65
SKAP2-201ENST00000345317 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
SKAP2-201ENST00000345317 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.65
SKAP2-201ENST00000345317 RPS29P62273 56 aaKnown RBP4.71□□□□□ -1.66
SKAP2-201ENST00000345317 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.66
SKAP2-201ENST00000345317 A0A1B0GU33 70 aa4.7□□□□□ -1.66
SKAP2-201ENST00000345317 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
SKAP2-201ENST00000345317 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
SKAP2-201ENST00000345317 A8MUU9 505 aa4.67□□□□□ -1.66
SKAP2-201ENST00000345317 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
SKAP2-201ENST00000345317 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
SKAP2-201ENST00000345317 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
SKAP2-201ENST00000345317 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
SKAP2-201ENST00000345317 A0A0D9SG42 100 aa4.65□□□□□ -1.66
SKAP2-201ENST00000345317 ALMS1Q8TCU4 4167 aa4.65□□□□□ -1.67
SKAP2-201ENST00000345317 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SKAP2-201ENST00000345317 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
SKAP2-201ENST00000345317 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
SKAP2-201ENST00000345317 XP32Q5T750 250 aa4.63□□□□□ -1.67
SKAP2-201ENST00000345317 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
SKAP2-201ENST00000345317 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
SKAP2-201ENST00000345317 KRTAP4-5Q9BYR2 181 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms