RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
TCF3-202ENST00000344749 TGP01266 2768 aa7.9□□□□□ -1.14
TCF3-202ENST00000344749 FLG2Q5D862 2391 aaPredicted RBP7.89□□□□□ -1.15
TCF3-202ENST00000344749 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
TCF3-202ENST00000344749 Q8N1X5 172 aa7.86□□□□□ -1.15
TCF3-202ENST00000344749 Q5VV11 94 aa7.86□□□□□ -1.15
TCF3-202ENST00000344749 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
TCF3-202ENST00000344749 KRTAP10-1P60331 282 aa7.84□□□□□ -1.15
TCF3-202ENST00000344749 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
TCF3-202ENST00000344749 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
TCF3-202ENST00000344749 Q6ZR54 194 aa7.81□□□□□ -1.16
TCF3-202ENST00000344749 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
TCF3-202ENST00000344749 UQCR11O14957 56 aa7.79□□□□□ -1.16
TCF3-202ENST00000344749 HRES1P13985 223 aa7.78□□□□□ -1.16
TCF3-202ENST00000344749 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
TCF3-202ENST00000344749 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
TCF3-202ENST00000344749 A8MU10 97 aa7.77□□□□□ -1.17
TCF3-202ENST00000344749 VPS13CQ709C8 3753 aa7.76□□□□□ -1.17
TCF3-202ENST00000344749 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
TCF3-202ENST00000344749 Q75L30 129 aa7.76□□□□□ -1.17
TCF3-202ENST00000344749 A0A087X002 238 aa7.75□□□□□ -1.17
TCF3-202ENST00000344749 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
TCF3-202ENST00000344749 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
TCF3-202ENST00000344749 SPINK7P58062 85 aa7.72□□□□□ -1.17
TCF3-202ENST00000344749 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
TCF3-202ENST00000344749 Q5W150 140 aa7.69□□□□□ -1.18
TCF3-202ENST00000344749 ZCCHC13Q8WW36 166 aaKnown RBP7.65□□□□□ -1.18
TCF3-202ENST00000344749 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
TCF3-202ENST00000344749 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
TCF3-202ENST00000344749 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
TCF3-202ENST00000344749 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
TCF3-202ENST00000344749 J3QL48 77 aa7.61□□□□□ -1.19
TCF3-202ENST00000344749 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.2
TCF3-202ENST00000344749 LCE6AA0A183 80 aa7.58□□□□□ -1.2
TCF3-202ENST00000344749 ZNF469Q96JG9 3925 aaPredicted RBP7.54□□□□□ -1.2
TCF3-202ENST00000344749 A0A0D9SG42 100 aa7.54□□□□□ -1.2
TCF3-202ENST00000344749 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
TCF3-202ENST00000344749 A6NN06 94 aa7.54□□□□□ -1.2
TCF3-202ENST00000344749 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
TCF3-202ENST00000344749 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
TCF3-202ENST00000344749 CRIPTQ9P021 101 aa7.49□□□□□ -1.21
TCF3-202ENST00000344749 Q5VSD8 79 aa7.48□□□□□ -1.21
TCF3-202ENST00000344749 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.21
TCF3-202ENST00000344749 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
TCF3-202ENST00000344749 A0A1B0GU33 70 aa7.44□□□□□ -1.22
TCF3-202ENST00000344749 Q6ZSA8 131 aa7.42□□□□□ -1.22
TCF3-202ENST00000344749 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
TCF3-202ENST00000344749 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
TCF3-202ENST00000344749 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
TCF3-202ENST00000344749 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
TCF3-202ENST00000344749 S4R3F8 94 aa7.26□□□□□ -1.25
TCF3-202ENST00000344749 SPATA8Q6RVD6 105 aa7.24□□□□□ -1.25
TCF3-202ENST00000344749 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
TCF3-202ENST00000344749 RPS29P62273 56 aaKnown RBP7.18□□□□□ -1.26
TCF3-202ENST00000344749 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
TCF3-202ENST00000344749 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
TCF3-202ENST00000344749 ROMO1P60602 79 aa7.13□□□□□ -1.27
TCF3-202ENST00000344749 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
TCF3-202ENST00000344749 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
TCF3-202ENST00000344749 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
TCF3-202ENST00000344749 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
TCF3-202ENST00000344749 R4GN34 69 aa7.08□□□□□ -1.28
TCF3-202ENST00000344749 A8MUU9 505 aa7.08□□□□□ -1.28
TCF3-202ENST00000344749 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
TCF3-202ENST00000344749 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
TCF3-202ENST00000344749 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
TCF3-202ENST00000344749 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
TCF3-202ENST00000344749 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
TCF3-202ENST00000344749 M0R2T5 61 aa7.04□□□□□ -1.28
TCF3-202ENST00000344749 M0QZ58 72 aa7.01□□□□□ -1.29
TCF3-202ENST00000344749 A0A0A0MQY5 61 aa7□□□□□ -1.29
TCF3-202ENST00000344749 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
TCF3-202ENST00000344749 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
TCF3-202ENST00000344749 XP32Q5T750 250 aa6.93□□□□□ -1.3
TCF3-202ENST00000344749 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
TCF3-202ENST00000344749 H0YAA0 97 aa6.81□□□□□ -1.32
TCF3-202ENST00000344749 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
TCF3-202ENST00000344749 DNAH9Q9NYC9 4486 aa6.75□□□□□ -1.33
TCF3-202ENST00000344749 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
TCF3-202ENST00000344749 DNHD1Q96M86 4753 aa6.73□□□□□ -1.33
TCF3-202ENST00000344749 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.34
TCF3-202ENST00000344749 P0C880 135 aa6.71□□□□□ -1.34
TCF3-202ENST00000344749 DNAH10Q8IVF4 4471 aa6.71□□□□□ -1.34
TCF3-202ENST00000344749 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
TCF3-202ENST00000344749 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
TCF3-202ENST00000344749 DNAH11Q96DT5 4516 aa6.61□□□□□ -1.35
TCF3-202ENST00000344749 DNAH1Q9P2D7 4330 aa6.57□□□□□ -1.36
TCF3-202ENST00000344749 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
TCF3-202ENST00000344749 STARD9Q9P2P6 4700 aa6.52□□□□□ -1.37
TCF3-202ENST00000344749 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
TCF3-202ENST00000344749 PRKDCP78527 4128 aaKnown RBP6.49□□□□□ -1.37
TCF3-202ENST00000344749 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TCF3-202ENST00000344749 ANK2Q01484 3957 aa6.48□□□□□ -1.37
TCF3-202ENST00000344749 FAT1Q14517 4588 aa6.44□□□□□ -1.38
TCF3-202ENST00000344749 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
TCF3-202ENST00000344749 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
TCF3-202ENST00000344749 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
TCF3-202ENST00000344749 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
TCF3-202ENST00000344749 KMT2AQ03164 3969 aa6.37□□□□□ -1.39
TCF3-202ENST00000344749 LRP1BQ9NZR2 4599 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms