RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 HTN1P15515 57 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 NOTCH1P46531 2555 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 H0Y9J4 135 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 KLK12Q9UKR0 248 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
ZNF540-202ENST00000343599 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.68
ZNF540-202ENST00000343599 MP68P56378 58 aa4.59□□□□□ -1.68
ZNF540-202ENST00000343599 PSORS1C2Q9UIG4 136 aa4.59□□□□□ -1.68
ZNF540-202ENST00000343599 RPL37AP8A6NKH3 93 aa4.58□□□□□ -1.68
ZNF540-202ENST00000343599 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
ZNF540-202ENST00000343599 KRTAP26-1Q6PEX3 210 aa4.57□□□□□ -1.68
ZNF540-202ENST00000343599 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
ZNF540-202ENST00000343599 TRGV4A0A0C4DH28 118 aa4.57□□□□□ -1.68
ZNF540-202ENST00000343599 LINC00959A0A1B0GUT2 108 aa4.57□□□□□ -1.68
ZNF540-202ENST00000343599 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
ZNF540-202ENST00000343599 H3BPC8 53 aa4.56□□□□□ -1.68
ZNF540-202ENST00000343599 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
ZNF540-202ENST00000343599 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
ZNF540-202ENST00000343599 NOP10Q9NPE3 64 aaKnown RBP4.56□□□□□ -1.68
ZNF540-202ENST00000343599 IGKV3OR2-268A0A0C4DH90 116 aa4.55□□□□□ -1.68
ZNF540-202ENST00000343599 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
ZNF540-202ENST00000343599 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
ZNF540-202ENST00000343599 DSCR10P59022 87 aa4.54□□□□□ -1.68
ZNF540-202ENST00000343599 COA5Q86WW8 74 aa4.54□□□□□ -1.68
ZNF540-202ENST00000343599 SPINK7P58062 85 aa4.54□□□□□ -1.68
ZNF540-202ENST00000343599 HERC1Q15751 4861 aa4.53□□□□□ -1.68
ZNF540-202ENST00000343599 IGLV5-48A0A075B6I7 105 aa4.53□□□□□ -1.68
ZNF540-202ENST00000343599 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
ZNF540-202ENST00000343599 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
ZNF540-202ENST00000343599 K7EQZ3 153 aa4.52□□□□□ -1.69
ZNF540-202ENST00000343599 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
ZNF540-202ENST00000343599 SPAG11BQ08648 103 aa4.51□□□□□ -1.69
ZNF540-202ENST00000343599 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
ZNF540-202ENST00000343599 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
ZNF540-202ENST00000343599 IGKV2D-24A0A075B6R9 120 aa4.49□□□□□ -1.69
ZNF540-202ENST00000343599 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
ZNF540-202ENST00000343599 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
ZNF540-202ENST00000343599 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 H0Y9P7 68 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 SPAG11AQ6PDA7 123 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 DEFB4AO15263 64 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 RETNLBQ9BQ08 111 aa4.47□□□□□ -1.69
ZNF540-202ENST00000343599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
ZNF540-202ENST00000343599 DEFB130BP0DP73 79 aa4.46□□□□□ -1.7
ZNF540-202ENST00000343599 DEFB130AP0DP74 79 aa4.46□□□□□ -1.7
ZNF540-202ENST00000343599 Q8NBF4 154 aa4.46□□□□□ -1.7
ZNF540-202ENST00000343599 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
ZNF540-202ENST00000343599 WFDC10BQ8IUB3 73 aa4.45□□□□□ -1.7
ZNF540-202ENST00000343599 Q8N377 158 aa4.45□□□□□ -1.7
ZNF540-202ENST00000343599 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
ZNF540-202ENST00000343599 LORP23490 312 aaPredicted RBP4.44□□□□□ -1.7
ZNF540-202ENST00000343599 UNQ6190/PRO20217Q6UXQ8 127 aa4.44□□□□□ -1.7
ZNF540-202ENST00000343599 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
ZNF540-202ENST00000343599 C1orf137Q5JT78 98 aa4.42□□□□□ -1.7
ZNF540-202ENST00000343599 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
ZNF540-202ENST00000343599 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
ZNF540-202ENST00000343599 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
ZNF540-202ENST00000343599 CSAG1Q6PB30 78 aa4.4□□□□□ -1.7
ZNF540-202ENST00000343599 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.7
ZNF540-202ENST00000343599 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
ZNF540-202ENST00000343599 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 HRES1P13985 223 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 HTN3P15516 51 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 C6orf48Q9UBA6 75 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 XAGE1AQ9HD64 81 aa4.38□□□□□ -1.71
ZNF540-202ENST00000343599 ROMO1P60602 79 aa4.36□□□□□ -1.71
ZNF540-202ENST00000343599 ANGP03950 147 aaKnown RBP4.33□□□□□ -1.72
ZNF540-202ENST00000343599 Q6ZRX8 168 aa4.32□□□□□ -1.72
ZNF540-202ENST00000343599 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
ZNF540-202ENST00000343599 C15orf56Q8N910 161 aa4.32□□□□□ -1.72
ZNF540-202ENST00000343599 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
ZNF540-202ENST00000343599 PCOTHQ58A44 107 aa4.32□□□□□ -1.72
ZNF540-202ENST00000343599 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
ZNF540-202ENST00000343599 A8MWP4 228 aa4.31□□□□□ -1.72
ZNF540-202ENST00000343599 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
ZNF540-202ENST00000343599 TP53AIP1Q9HCN2 124 aa4.3□□□□□ -1.72
ZNF540-202ENST00000343599 IGKV2-24A0A0C4DH68 120 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 ZNF861PO60384 105 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 SPRR1AP35321 89 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 IGLV8-61A0A075B6I0 122 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 IGFL1Q6UW32 110 aa4.29□□□□□ -1.72
ZNF540-202ENST00000343599 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
ZNF540-202ENST00000343599 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
ZNF540-202ENST00000343599 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
ZNF540-202ENST00000343599 A0A087WSZ3 146 aa4.27□□□□□ -1.73
ZNF540-202ENST00000343599 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
ZNF540-202ENST00000343599 CAMK2N2Q96S95 79 aa4.26□□□□□ -1.73
ZNF540-202ENST00000343599 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
ZNF540-202ENST00000343599 UQCR11O14957 56 aa4.26□□□□□ -1.73
ZNF540-202ENST00000343599 P0C880 135 aa4.25□□□□□ -1.73
ZNF540-202ENST00000343599 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
ZNF540-202ENST00000343599 C8orf17Q9NRJ1 99 aa4.25□□□□□ -1.73
ZNF540-202ENST00000343599 A0A1B0GU69 56 aa4.25□□□□□ -1.73
ZNF540-202ENST00000343599 A0A0G2JQZ4 141 aa4.23□□□□□ -1.73
ZNF540-202ENST00000343599 A0A1W2PNN7 141 aa4.23□□□□□ -1.73
ZNF540-202ENST00000343599 ACYP2P14621 99 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms