RNA–Protein interactions for RNA: ENST00000343067.8

EPB41-201, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-201ENST00000343067 KMT2BQ9UMN6 2715 aaPredicted RBP4.91□□□□□ -1.62
EPB41-201ENST00000343067 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
EPB41-201ENST00000343067 F8P00451 2351 aa4.91□□□□□ -1.62
EPB41-201ENST00000343067 NOTCH2Q04721 2471 aa4.9□□□□□ -1.62
EPB41-201ENST00000343067 C9orf92A6NGG3 77 aa4.9□□□□□ -1.62
EPB41-201ENST00000343067 TEP1Q99973 2627 aaKnown RBP4.89□□□□□ -1.63
EPB41-201ENST00000343067 ATRQ13535 2644 aa4.89□□□□□ -1.63
EPB41-201ENST00000343067 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
EPB41-201ENST00000343067 J3QKU1 62 aa4.88□□□□□ -1.63
EPB41-201ENST00000343067 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
EPB41-201ENST00000343067 PKD1L1Q8TDX9 2849 aa4.88□□□□□ -1.63
EPB41-201ENST00000343067 ANK2Q01484 3957 aa4.87□□□□□ -1.63
EPB41-201ENST00000343067 HECTD1Q9ULT8 2610 aa4.87□□□□□ -1.63
EPB41-201ENST00000343067 M0R2N4 97 aa4.85□□□□□ -1.63
EPB41-201ENST00000343067 A8MU10 97 aa4.85□□□□□ -1.63
EPB41-201ENST00000343067 PRR34Q9NV39 138 aa4.84□□□□□ -1.63
EPB41-201ENST00000343067 SMR3AQ99954 134 aa4.83□□□□□ -1.64
EPB41-201ENST00000343067 TENM3Q9P273 2699 aa4.83□□□□□ -1.64
EPB41-201ENST00000343067 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
EPB41-201ENST00000343067 ZNF861PO60384 105 aa4.81□□□□□ -1.64
EPB41-201ENST00000343067 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
EPB41-201ENST00000343067 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
EPB41-201ENST00000343067 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
EPB41-201ENST00000343067 Q5W150 140 aa4.77□□□□□ -1.65
EPB41-201ENST00000343067 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
EPB41-201ENST00000343067 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
EPB41-201ENST00000343067 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
EPB41-201ENST00000343067 NBDYA0A0U1RRE5 68 aa4.74□□□□□ -1.65
EPB41-201ENST00000343067 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
EPB41-201ENST00000343067 DNAH3Q8TD57 4116 aa4.73□□□□□ -1.65
EPB41-201ENST00000343067 STAB1Q9NY15 2570 aa4.73□□□□□ -1.65
EPB41-201ENST00000343067 MAST4O15021 2626 aa4.73□□□□□ -1.65
EPB41-201ENST00000343067 PANO1I0J062 215 aa4.72□□□□□ -1.65
EPB41-201ENST00000343067 FLNBO75369 2602 aaKnown RBP4.72□□□□□ -1.65
EPB41-201ENST00000343067 NOTCH1P46531 2555 aa4.71□□□□□ -1.65
EPB41-201ENST00000343067 H3BNG1 76 aa4.71□□□□□ -1.66
EPB41-201ENST00000343067 NBEAL1Q6ZS30 2694 aa4.71□□□□□ -1.66
EPB41-201ENST00000343067 FBN1P35555 2871 aaKnown RBP4.69□□□□□ -1.66
EPB41-201ENST00000343067 BAHCC1Q9P281 2608 aa4.67□□□□□ -1.66
EPB41-201ENST00000343067 S4R3F8 94 aa4.67□□□□□ -1.66
EPB41-201ENST00000343067 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
EPB41-201ENST00000343067 WWC2-AS2Q96NR7 200 aa4.65□□□□□ -1.66
EPB41-201ENST00000343067 P0C880 135 aa4.65□□□□□ -1.67
EPB41-201ENST00000343067 LYSTQ99698 3801 aa4.65□□□□□ -1.67
EPB41-201ENST00000343067 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.67
EPB41-201ENST00000343067 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
EPB41-201ENST00000343067 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
EPB41-201ENST00000343067 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
EPB41-201ENST00000343067 HUWE1Q7Z6Z7 4374 aaKnown RBP4.63□□□□□ -1.67
EPB41-201ENST00000343067 SPRR1AP35321 89 aa4.63□□□□□ -1.67
EPB41-201ENST00000343067 M0QZ58 72 aa4.62□□□□□ -1.67
EPB41-201ENST00000343067 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
EPB41-201ENST00000343067 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
EPB41-201ENST00000343067 SRRM2Q9UQ35 2752 aaKnown RBP4.6□□□□□ -1.67
EPB41-201ENST00000343067 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
EPB41-201ENST00000343067 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.67
EPB41-201ENST00000343067 COL7A1Q02388 2944 aa4.59□□□□□ -1.67
EPB41-201ENST00000343067 LCE6AA0A183 80 aa4.57□□□□□ -1.68
EPB41-201ENST00000343067 TENM2Q9NT68 2774 aa4.57□□□□□ -1.68
EPB41-201ENST00000343067 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
EPB41-201ENST00000343067 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
EPB41-201ENST00000343067 SPRR1BP22528 89 aa4.55□□□□□ -1.68
EPB41-201ENST00000343067 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
EPB41-201ENST00000343067 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
EPB41-201ENST00000343067 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
EPB41-201ENST00000343067 INE1O15225 51 aa4.5□□□□□ -1.69
EPB41-201ENST00000343067 A0A087WTM6 91 aa4.49□□□□□ -1.69
EPB41-201ENST00000343067 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
EPB41-201ENST00000343067 Q6ZSA8 131 aa4.48□□□□□ -1.69
EPB41-201ENST00000343067 ANAPC11Q9NYG5 84 aa4.47□□□□□ -1.69
EPB41-201ENST00000343067 K7EIL1 84 aa4.47□□□□□ -1.69
EPB41-201ENST00000343067 KRTAP29-1A8MX34 341 aaPredicted RBP4.45□□□□□ -1.7
EPB41-201ENST00000343067 TNP1P09430 55 aa4.45□□□□□ -1.7
EPB41-201ENST00000343067 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
EPB41-201ENST00000343067 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
EPB41-201ENST00000343067 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
EPB41-201ENST00000343067 DNAH8Q96JB1 4490 aa4.42□□□□□ -1.7
EPB41-201ENST00000343067 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
EPB41-201ENST00000343067 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
EPB41-201ENST00000343067 KRTAP13-1Q8IUC0 172 aa4.41□□□□□ -1.7
EPB41-201ENST00000343067 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
EPB41-201ENST00000343067 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
EPB41-201ENST00000343067 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
EPB41-201ENST00000343067 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
EPB41-201ENST00000343067 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
EPB41-201ENST00000343067 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
EPB41-201ENST00000343067 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
EPB41-201ENST00000343067 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.71
EPB41-201ENST00000343067 DNHD1Q96M86 4753 aa4.34□□□□□ -1.72
EPB41-201ENST00000343067 M0R2T5 61 aa4.33□□□□□ -1.72
EPB41-201ENST00000343067 TGP01266 2768 aa4.32□□□□□ -1.72
EPB41-201ENST00000343067 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
EPB41-201ENST00000343067 DNAH11Q96DT5 4516 aa4.27□□□□□ -1.73
EPB41-201ENST00000343067 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
EPB41-201ENST00000343067 ALMS1Q8TCU4 4167 aa4.27□□□□□ -1.73
EPB41-201ENST00000343067 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
EPB41-201ENST00000343067 PLAC8Q9NZF1 115 aa4.24□□□□□ -1.73
EPB41-201ENST00000343067 H0YAA0 97 aa4.24□□□□□ -1.73
EPB41-201ENST00000343067 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
EPB41-201ENST00000343067 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms