RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 Q6ZVQ6 151 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 ATOX1O00244 68 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 SPINK1P00995 79 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 SPAG11AQ6PDA7 123 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
TMC1-202ENST00000340019 RPS29P62273 56 aaKnown RBP4.5□□□□□ -1.69
TMC1-202ENST00000340019 CYSTM1Q9H1C7 97 aa4.5□□□□□ -1.69
TMC1-202ENST00000340019 NREPQ16612 68 aa4.49□□□□□ -1.69
TMC1-202ENST00000340019 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
TMC1-202ENST00000340019 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
TMC1-202ENST00000340019 Q96NJ1 140 aa4.49□□□□□ -1.69
TMC1-202ENST00000340019 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
TMC1-202ENST00000340019 LINC00643Q86TS7 51 aa4.48□□□□□ -1.69
TMC1-202ENST00000340019 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
TMC1-202ENST00000340019 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
TMC1-202ENST00000340019 SERP2Q8N6R1 65 aa4.46□□□□□ -1.7
TMC1-202ENST00000340019 CXCL6P80162 114 aa4.45□□□□□ -1.7
TMC1-202ENST00000340019 DEFB116Q30KQ4 102 aa4.45□□□□□ -1.7
TMC1-202ENST00000340019 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
TMC1-202ENST00000340019 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
TMC1-202ENST00000340019 A0A0U1RQV1 116 aa4.44□□□□□ -1.7
TMC1-202ENST00000340019 BPY2O14599 106 aa4.44□□□□□ -1.7
TMC1-202ENST00000340019 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
TMC1-202ENST00000340019 IGKV3D-7A0A0C4DH55 119 aa4.44□□□□□ -1.7
TMC1-202ENST00000340019 DSCR10P59022 87 aa4.44□□□□□ -1.7
TMC1-202ENST00000340019 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
TMC1-202ENST00000340019 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
TMC1-202ENST00000340019 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
TMC1-202ENST00000340019 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
TMC1-202ENST00000340019 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
TMC1-202ENST00000340019 A8MWP4 228 aa4.41□□□□□ -1.7
TMC1-202ENST00000340019 K7EQZ3 153 aa4.41□□□□□ -1.7
TMC1-202ENST00000340019 Q8N9L7 120 aa4.41□□□□□ -1.7
TMC1-202ENST00000340019 FP248Q71RG6 208 aaPredicted RBP4.4□□□□□ -1.7
TMC1-202ENST00000340019 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
TMC1-202ENST00000340019 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
TMC1-202ENST00000340019 A0A1B0GVX0 72 aa4.37□□□□□ -1.71
TMC1-202ENST00000340019 NDUFB1O75438 58 aa4.37□□□□□ -1.71
TMC1-202ENST00000340019 A0A087WVE0 104 aa4.37□□□□□ -1.71
TMC1-202ENST00000340019 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
TMC1-202ENST00000340019 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
TMC1-202ENST00000340019 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
TMC1-202ENST00000340019 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
TMC1-202ENST00000340019 H7BZZ5 65 aa4.34□□□□□ -1.72
TMC1-202ENST00000340019 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
TMC1-202ENST00000340019 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
TMC1-202ENST00000340019 HERC1Q15751 4861 aa4.33□□□□□ -1.72
TMC1-202ENST00000340019 LINC00313P59037 77 aa4.32□□□□□ -1.72
TMC1-202ENST00000340019 C20orf197Q8N268 126 aa4.32□□□□□ -1.72
TMC1-202ENST00000340019 IGLV7-46A0A075B6I9 117 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 KRTAP16-1A8MUX0 517 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 LPAP08519 4548 aa4.31□□□□□ -1.72
TMC1-202ENST00000340019 ATP5EP56381 51 aaPredicted RBP4.3□□□□□ -1.72
TMC1-202ENST00000340019 PRR4Q16378 134 aa4.3□□□□□ -1.72
TMC1-202ENST00000340019 KRTAP13-3Q3SY46 172 aa4.3□□□□□ -1.72
TMC1-202ENST00000340019 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
TMC1-202ENST00000340019 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
TMC1-202ENST00000340019 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
TMC1-202ENST00000340019 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
TMC1-202ENST00000340019 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
TMC1-202ENST00000340019 TPRXLQ17RH7 258 aa4.27□□□□□ -1.73
TMC1-202ENST00000340019 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
TMC1-202ENST00000340019 NDUFC1O43677 76 aa4.26□□□□□ -1.73
TMC1-202ENST00000340019 LRP2P98164 4655 aa4.26□□□□□ -1.73
TMC1-202ENST00000340019 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
TMC1-202ENST00000340019 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
TMC1-202ENST00000340019 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
TMC1-202ENST00000340019 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
TMC1-202ENST00000340019 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
TMC1-202ENST00000340019 A8MUU9 505 aa4.24□□□□□ -1.73
TMC1-202ENST00000340019 XP32Q5T750 250 aa4.24□□□□□ -1.73
TMC1-202ENST00000340019 NDUFS5O43920 106 aa4.23□□□□□ -1.73
TMC1-202ENST00000340019 Q75L30 129 aa4.23□□□□□ -1.73
TMC1-202ENST00000340019 TP53AIP1Q9HCN2 124 aa4.23□□□□□ -1.73
TMC1-202ENST00000340019 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
TMC1-202ENST00000340019 H3BS24 57 aa4.22□□□□□ -1.73
TMC1-202ENST00000340019 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
TMC1-202ENST00000340019 RPL37P61927 97 aaKnown RBP4.2□□□□□ -1.74
TMC1-202ENST00000340019 Q5W150 140 aa4.2□□□□□ -1.74
TMC1-202ENST00000340019 MUC17Q685J3 4493 aa4.18□□□□□ -1.74
TMC1-202ENST00000340019 Q1T7F1 81 aa4.18□□□□□ -1.74
TMC1-202ENST00000340019 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
TMC1-202ENST00000340019 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
TMC1-202ENST00000340019 H0Y9P7 68 aa4.15□□□□□ -1.74
TMC1-202ENST00000340019 ATP11AUNQ6ZP68 121 aa4.15□□□□□ -1.75
TMC1-202ENST00000340019 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
TMC1-202ENST00000340019 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
TMC1-202ENST00000340019 MP68P56378 58 aa4.13□□□□□ -1.75
TMC1-202ENST00000340019 H3BPC8 53 aa4.13□□□□□ -1.75
TMC1-202ENST00000340019 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
TMC1-202ENST00000340019 LINC00208Q96KT6 92 aa4.12□□□□□ -1.75
TMC1-202ENST00000340019 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
TMC1-202ENST00000340019 C1orf64Q8NEQ6 169 aa4.11□□□□□ -1.75
TMC1-202ENST00000340019 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
TMC1-202ENST00000340019 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
TMC1-202ENST00000340019 CYP4F30PQ9H0H9 118 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms