RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
PCDH8-201ENST00000338862 ZNF861PO60384 105 aa8.48□□□□□ -1.05
PCDH8-201ENST00000338862 DNAH10Q8IVF4 4471 aa8.47□□□□□ -1.05
PCDH8-201ENST00000338862 A0A1B0GU69 56 aa8.47□□□□□ -1.05
PCDH8-201ENST00000338862 Q5W150 140 aa8.46□□□□□ -1.05
PCDH8-201ENST00000338862 PRAC1Q96KF2 57 aa8.46□□□□□ -1.05
PCDH8-201ENST00000338862 ACYP2P14621 99 aa8.46□□□□□ -1.06
PCDH8-201ENST00000338862 Q75L30 129 aa8.46□□□□□ -1.06
PCDH8-201ENST00000338862 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.06
PCDH8-201ENST00000338862 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
PCDH8-201ENST00000338862 LINC00313P59037 77 aa8.44□□□□□ -1.06
PCDH8-201ENST00000338862 WWC2-AS2Q96NR7 200 aa8.44□□□□□ -1.06
PCDH8-201ENST00000338862 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
PCDH8-201ENST00000338862 Q96NJ1 140 aa8.42□□□□□ -1.06
PCDH8-201ENST00000338862 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
PCDH8-201ENST00000338862 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
PCDH8-201ENST00000338862 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
PCDH8-201ENST00000338862 LYSTQ99698 3801 aa8.36□□□□□ -1.07
PCDH8-201ENST00000338862 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
PCDH8-201ENST00000338862 Q8N1X5 172 aa8.33□□□□□ -1.08
PCDH8-201ENST00000338862 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
PCDH8-201ENST00000338862 Q6ZR54 194 aa8.32□□□□□ -1.08
PCDH8-201ENST00000338862 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
PCDH8-201ENST00000338862 MEGF8Q7Z7M0 2845 aa8.32□□□□□ -1.08
PCDH8-201ENST00000338862 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
PCDH8-201ENST00000338862 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
PCDH8-201ENST00000338862 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
PCDH8-201ENST00000338862 A6NN06 94 aa8.26□□□□□ -1.09
PCDH8-201ENST00000338862 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
PCDH8-201ENST00000338862 PLA2G1BP04054 148 aaKnown RBP8.25□□□□□ -1.09
PCDH8-201ENST00000338862 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
PCDH8-201ENST00000338862 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
PCDH8-201ENST00000338862 UQCR11O14957 56 aa8.23□□□□□ -1.09
PCDH8-201ENST00000338862 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
PCDH8-201ENST00000338862 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
PCDH8-201ENST00000338862 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
PCDH8-201ENST00000338862 SSBP3-AS1Q7Z2R9 100 aa8.22□□□□□ -1.09
PCDH8-201ENST00000338862 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
PCDH8-201ENST00000338862 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
PCDH8-201ENST00000338862 DNAH9Q9NYC9 4486 aa8.15□□□□□ -1.11
PCDH8-201ENST00000338862 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
PCDH8-201ENST00000338862 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
PCDH8-201ENST00000338862 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
PCDH8-201ENST00000338862 KRTAP13-2Q52LG2 175 aa8.09□□□□□ -1.11
PCDH8-201ENST00000338862 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
PCDH8-201ENST00000338862 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
PCDH8-201ENST00000338862 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
PCDH8-201ENST00000338862 DNAH7Q8WXX0 4024 aa8.02□□□□□ -1.12
PCDH8-201ENST00000338862 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
PCDH8-201ENST00000338862 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
PCDH8-201ENST00000338862 FRAS1Q86XX4 4008 aa7.99□□□□□ -1.13
PCDH8-201ENST00000338862 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
PCDH8-201ENST00000338862 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
PCDH8-201ENST00000338862 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
PCDH8-201ENST00000338862 K7ERS5 55 aa7.92□□□□□ -1.14
PCDH8-201ENST00000338862 A0A0D9SG42 100 aa7.92□□□□□ -1.14
PCDH8-201ENST00000338862 DNAH1Q9P2D7 4330 aa7.88□□□□□ -1.15
PCDH8-201ENST00000338862 KMT2AQ03164 3969 aa7.88□□□□□ -1.15
PCDH8-201ENST00000338862 A0A1B0GU33 70 aa7.88□□□□□ -1.15
PCDH8-201ENST00000338862 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
PCDH8-201ENST00000338862 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
PCDH8-201ENST00000338862 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
PCDH8-201ENST00000338862 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
PCDH8-201ENST00000338862 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
PCDH8-201ENST00000338862 Q6ZSA8 131 aa7.76□□□□□ -1.17
PCDH8-201ENST00000338862 DNAH17Q9UFH2 4485 aa7.76□□□□□ -1.17
PCDH8-201ENST00000338862 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
PCDH8-201ENST00000338862 PRKDCP78527 4128 aaKnown RBP7.74□□□□□ -1.17
PCDH8-201ENST00000338862 DNAH3Q8TD57 4116 aa7.74□□□□□ -1.17
PCDH8-201ENST00000338862 H0YAA0 97 aa7.72□□□□□ -1.17
PCDH8-201ENST00000338862 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
PCDH8-201ENST00000338862 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
PCDH8-201ENST00000338862 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
PCDH8-201ENST00000338862 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
PCDH8-201ENST00000338862 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.18
PCDH8-201ENST00000338862 DNAH2Q9P225 4427 aa7.64□□□□□ -1.19
PCDH8-201ENST00000338862 HECTD4Q9Y4D8 3996 aa7.63□□□□□ -1.19
PCDH8-201ENST00000338862 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
PCDH8-201ENST00000338862 COX6B2Q6YFQ2 88 aa7.58□□□□□ -1.2
PCDH8-201ENST00000338862 A8MUU9 505 aa7.56□□□□□ -1.2
PCDH8-201ENST00000338862 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
PCDH8-201ENST00000338862 FAT1Q14517 4588 aa7.5□□□□□ -1.21
PCDH8-201ENST00000338862 C10orf95Q9H7T3 257 aa7.5□□□□□ -1.21
PCDH8-201ENST00000338862 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
PCDH8-201ENST00000338862 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
PCDH8-201ENST00000338862 VPS13BQ7Z7G8 4022 aa7.47□□□□□ -1.21
PCDH8-201ENST00000338862 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
PCDH8-201ENST00000338862 ROMO1P60602 79 aa7.46□□□□□ -1.21
PCDH8-201ENST00000338862 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
PCDH8-201ENST00000338862 S4R3F8 94 aa7.43□□□□□ -1.22
PCDH8-201ENST00000338862 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
PCDH8-201ENST00000338862 HYDINQ4G0P3 5121 aa7.4□□□□□ -1.22
PCDH8-201ENST00000338862 MYCBP2O75592 4640 aa7.37□□□□□ -1.23
PCDH8-201ENST00000338862 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
PCDH8-201ENST00000338862 P0C880 135 aa7.35□□□□□ -1.23
PCDH8-201ENST00000338862 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
PCDH8-201ENST00000338862 Q5VSD8 79 aa7.32□□□□□ -1.24
PCDH8-201ENST00000338862 PKHD1P08F94 4074 aa7.31□□□□□ -1.24
PCDH8-201ENST00000338862 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
PCDH8-201ENST00000338862 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms