RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 LINC00313P59037 77 aa1.74□□□□□ -2.13
RGPD6-201ENST00000329516 KRTAP23-1A1A580 65 aa1.74□□□□□ -2.13
RGPD6-201ENST00000329516 APLNQ9ULZ1 77 aa1.74□□□□□ -2.13
RGPD6-201ENST00000329516 C10orf55Q5SWW7 151 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 SMIM29Q86T20 159 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 K7EQZ3 153 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 SPACA4Q8TDM5 124 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 PRB2P02812 416 aaPredicted RBP1.73□□□□□ -2.13
RGPD6-201ENST00000329516 ST20-AS1Q8NBB2 130 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 IGLC6P0CF74 106 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 PROK1P58294 105 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 S4R3C0 116 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 IGLV5-52A0A0A0MRZ9 124 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 KRTAP13-3Q3SY46 172 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 FAM229BQ4G0N7 80 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 LEAP2Q969E1 77 aa1.73□□□□□ -2.13
RGPD6-201ENST00000329516 DEFB1P60022 68 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 A0A1W2PNN7 141 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 K7EIM0 57 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 SPINK7P58062 85 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 Q8N9P0 234 aaPredicted RBP1.72□□□□□ -2.13
RGPD6-201ENST00000329516 I3L2K1 104 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 M0QY20 66 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 WIPF1O43516 503 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 EGFEM1PQ0D2K5 195 aa1.72□□□□□ -2.13
RGPD6-201ENST00000329516 IGLV1-51P01701 117 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 KRTAP10-9P60411 292 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 DEFB114Q30KQ6 69 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 Q8TAT8 98 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.71□□□□□ -2.14
RGPD6-201ENST00000329516 SDHAF1A6NFY7 115 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 IBA57-AS1B1ANH7 110 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 H3BNG1 76 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 NRGNQ92686 78 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 Q6ZSN1 163 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 PRB3Q04118 309 aaPredicted RBP1.71□□□□□ -2.14
RGPD6-201ENST00000329516 WWC2-AS2Q96NR7 200 aa1.71□□□□□ -2.14
RGPD6-201ENST00000329516 IGHV6-1A0A0B4J1U7 121 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 HRCT1Q6UXD1 115 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 WFDC13Q8IUB5 93 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 MAPK1IP1LQ8NDC0 245 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 K7EQG2 157 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
RGPD6-201ENST00000329516 G3V318 75 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 Q8NAQ8 132 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 PRR34Q9NV39 138 aa1.7□□□□□ -2.14
RGPD6-201ENST00000329516 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
RGPD6-201ENST00000329516 FAM218AQ96MZ4 157 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 Q6ZQT0 140 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 TYMSOSQ8TAI1 123 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 ENHOQ6UWT2 76 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 LINC01561Q8N1V8 128 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 IGFL1Q6UW32 110 aa1.69□□□□□ -2.14
RGPD6-201ENST00000329516 PRAC1Q96KF2 57 aa1.68□□□□□ -2.14
RGPD6-201ENST00000329516 KRTAP4-16G5E9R7 235 aaPredicted RBP1.68□□□□□ -2.14
RGPD6-201ENST00000329516 IGIPA6NJ69 53 aa1.68□□□□□ -2.14
RGPD6-201ENST00000329516 MT3P25713 68 aa1.68□□□□□ -2.14
RGPD6-201ENST00000329516 LINC01547P58512 204 aaPredicted RBP1.68□□□□□ -2.14
RGPD6-201ENST00000329516 MRPL34Q9BQ48 92 aaKnown RBP1.68□□□□□ -2.14
RGPD6-201ENST00000329516 APELAP0DMC3 54 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 C20orf166-AS1Q96NR2 134 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 C16orf90A8MZG2 172 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 IGHV3OR16-8A0A075B7F1 116 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 CSAG1Q6PB30 78 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 LRCOL1A6NCL2 159 aa1.67□□□□□ -2.14
RGPD6-201ENST00000329516 PRR3P79522 188 aaKnown RBP1.67□□□□□ -2.14
RGPD6-201ENST00000329516 KRTAP10-11P60412 298 aa1.66□□□□□ -2.14
RGPD6-201ENST00000329516 A0A087WVE0 104 aa1.66□□□□□ -2.14
RGPD6-201ENST00000329516 DEFB131BA0A096LNP1 70 aa1.66□□□□□ -2.14
RGPD6-201ENST00000329516 LINC00308Q8TCZ7 52 aa1.66□□□□□ -2.14
RGPD6-201ENST00000329516 LCE6AA0A183 80 aa1.65□□□□□ -2.14
RGPD6-201ENST00000329516 XP32Q5T750 250 aa1.65□□□□□ -2.14
RGPD6-201ENST00000329516 LELP1Q5T871 98 aa1.65□□□□□ -2.14
RGPD6-201ENST00000329516 Q8N377 158 aa1.65□□□□□ -2.14
RGPD6-201ENST00000329516 ZCCHC13Q8WW36 166 aaKnown RBP1.65□□□□□ -2.15
RGPD6-201ENST00000329516 A0A087WYN8 130 aa1.65□□□□□ -2.15
RGPD6-201ENST00000329516 DEFB135Q30KP9 77 aa1.65□□□□□ -2.15
RGPD6-201ENST00000329516 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
RGPD6-201ENST00000329516 IGLV5-48A0A075B6I7 105 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 DEFB136Q30KP8 78 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 SPANXA2-OT1Q8N9U9 137 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 Q6ZRP5 223 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 ODF3L2Q3SX64 289 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 SMR3AQ99954 134 aa1.64□□□□□ -2.15
RGPD6-201ENST00000329516 Q6ZRX8 168 aa1.63□□□□□ -2.15
RGPD6-201ENST00000329516 CLPSL2Q6UWE3 100 aa1.63□□□□□ -2.15
RGPD6-201ENST00000329516 A0A087X002 238 aa1.63□□□□□ -2.15
RGPD6-201ENST00000329516 PLAC8Q9NZF1 115 aa1.63□□□□□ -2.15
RGPD6-201ENST00000329516 LCE2AQ5TA79 106 aaPredicted RBP1.62□□□□□ -2.15
RGPD6-201ENST00000329516 NOTCH2NLQ7Z3S9 236 aa1.62□□□□□ -2.15
RGPD6-201ENST00000329516 POLR2KP53803 58 aaKnown RBP1.62□□□□□ -2.15
RGPD6-201ENST00000329516 LCE2BO14633 110 aa1.61□□□□□ -2.15
RGPD6-201ENST00000329516 LINC01556Q5JQF7 62 aa1.61□□□□□ -2.15
RGPD6-201ENST00000329516 ADM2Q7Z4H4 148 aa1.61□□□□□ -2.15
RGPD6-201ENST00000329516 Q6ZRU5 148 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms