RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
TOP3A-201ENST00000321105 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
TOP3A-201ENST00000321105 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
TOP3A-201ENST00000321105 OXTP01178 125 aa6.53□□□□□ -1.36
TOP3A-201ENST00000321105 A0A1B0GU69 56 aa6.51□□□□□ -1.37
TOP3A-201ENST00000321105 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
TOP3A-201ENST00000321105 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
TOP3A-201ENST00000321105 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
TOP3A-201ENST00000321105 LCE6AA0A183 80 aa6.45□□□□□ -1.38
TOP3A-201ENST00000321105 CD164Q04900 197 aa6.45□□□□□ -1.38
TOP3A-201ENST00000321105 FP248Q71RG6 208 aaPredicted RBP6.45□□□□□ -1.38
TOP3A-201ENST00000321105 HRES1P13985 223 aa6.43□□□□□ -1.38
TOP3A-201ENST00000321105 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
TOP3A-201ENST00000321105 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
TOP3A-201ENST00000321105 J3QL48 77 aa6.41□□□□□ -1.38
TOP3A-201ENST00000321105 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
TOP3A-201ENST00000321105 Q5W150 140 aa6.4□□□□□ -1.39
TOP3A-201ENST00000321105 Q5XG85 94 aa6.39□□□□□ -1.39
TOP3A-201ENST00000321105 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
TOP3A-201ENST00000321105 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
TOP3A-201ENST00000321105 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
TOP3A-201ENST00000321105 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
TOP3A-201ENST00000321105 Q5VSD8 79 aa6.36□□□□□ -1.39
TOP3A-201ENST00000321105 K7ERS5 55 aa6.36□□□□□ -1.39
TOP3A-201ENST00000321105 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
TOP3A-201ENST00000321105 SPINK7P58062 85 aa6.28□□□□□ -1.4
TOP3A-201ENST00000321105 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
TOP3A-201ENST00000321105 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
TOP3A-201ENST00000321105 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
TOP3A-201ENST00000321105 UQCR11O14957 56 aa6.26□□□□□ -1.41
TOP3A-201ENST00000321105 A0A0D9SG42 100 aa6.25□□□□□ -1.41
TOP3A-201ENST00000321105 Q1T7F1 81 aa6.24□□□□□ -1.41
TOP3A-201ENST00000321105 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
TOP3A-201ENST00000321105 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
TOP3A-201ENST00000321105 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
TOP3A-201ENST00000321105 Q5VV11 94 aa6.2□□□□□ -1.42
TOP3A-201ENST00000321105 Q6ZSA8 131 aa6.2□□□□□ -1.42
TOP3A-201ENST00000321105 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
TOP3A-201ENST00000321105 A8MU10 97 aa6.18□□□□□ -1.42
TOP3A-201ENST00000321105 ANK2Q01484 3957 aa6.16□□□□□ -1.42
TOP3A-201ENST00000321105 DNAH10Q8IVF4 4471 aa6.14□□□□□ -1.43
TOP3A-201ENST00000321105 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
TOP3A-201ENST00000321105 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
TOP3A-201ENST00000321105 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
TOP3A-201ENST00000321105 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TOP3A-201ENST00000321105 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
TOP3A-201ENST00000321105 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
TOP3A-201ENST00000321105 Q75L30 129 aa6.09□□□□□ -1.43
TOP3A-201ENST00000321105 DNAH9Q9NYC9 4486 aa6.09□□□□□ -1.43
TOP3A-201ENST00000321105 A0A1B0GU33 70 aa6.08□□□□□ -1.44
TOP3A-201ENST00000321105 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
TOP3A-201ENST00000321105 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
TOP3A-201ENST00000321105 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
TOP3A-201ENST00000321105 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
TOP3A-201ENST00000321105 LCA10Q71F78 164 aa6.04□□□□□ -1.44
TOP3A-201ENST00000321105 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
TOP3A-201ENST00000321105 LYSTQ99698 3801 aa5.99□□□□□ -1.45
TOP3A-201ENST00000321105 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
TOP3A-201ENST00000321105 S4R3F8 94 aa5.99□□□□□ -1.45
TOP3A-201ENST00000321105 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
TOP3A-201ENST00000321105 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
TOP3A-201ENST00000321105 CSAG1Q6PB30 78 aa5.94□□□□□ -1.46
TOP3A-201ENST00000321105 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
TOP3A-201ENST00000321105 M0R2T5 61 aa5.92□□□□□ -1.46
TOP3A-201ENST00000321105 KMT2AQ03164 3969 aa5.92□□□□□ -1.46
TOP3A-201ENST00000321105 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
TOP3A-201ENST00000321105 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
TOP3A-201ENST00000321105 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
TOP3A-201ENST00000321105 A8MUU9 505 aa5.89□□□□□ -1.47
TOP3A-201ENST00000321105 FAT1Q14517 4588 aa5.88□□□□□ -1.47
TOP3A-201ENST00000321105 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
TOP3A-201ENST00000321105 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
TOP3A-201ENST00000321105 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
TOP3A-201ENST00000321105 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
TOP3A-201ENST00000321105 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
TOP3A-201ENST00000321105 XP32Q5T750 250 aa5.85□□□□□ -1.47
TOP3A-201ENST00000321105 R4GN34 69 aa5.85□□□□□ -1.47
TOP3A-201ENST00000321105 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
TOP3A-201ENST00000321105 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
TOP3A-201ENST00000321105 M0QZ58 72 aa5.8□□□□□ -1.48
TOP3A-201ENST00000321105 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
TOP3A-201ENST00000321105 DNAH8Q96JB1 4490 aa5.78□□□□□ -1.48
TOP3A-201ENST00000321105 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
TOP3A-201ENST00000321105 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
TOP3A-201ENST00000321105 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
TOP3A-201ENST00000321105 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
TOP3A-201ENST00000321105 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
TOP3A-201ENST00000321105 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
TOP3A-201ENST00000321105 A6NN06 94 aa5.71□□□□□ -1.5
TOP3A-201ENST00000321105 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
TOP3A-201ENST00000321105 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
TOP3A-201ENST00000321105 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
TOP3A-201ENST00000321105 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.5
TOP3A-201ENST00000321105 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.51
TOP3A-201ENST00000321105 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
TOP3A-201ENST00000321105 P0C880 135 aa5.64□□□□□ -1.51
TOP3A-201ENST00000321105 H0YAA0 97 aa5.64□□□□□ -1.51
TOP3A-201ENST00000321105 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
TOP3A-201ENST00000321105 RYR1P21817 5038 aa5.62□□□□□ -1.51
TOP3A-201ENST00000321105 DNAH17Q9UFH2 4485 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms