RNA–Protein interactions for RNA: ENST00000320122.10

LMO3-202, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-202ENST00000320122 SPINK7P58062 85 aa3.93□□□□□ -1.78
LMO3-202ENST00000320122 ZNF861PO60384 105 aa3.92□□□□□ -1.78
LMO3-202ENST00000320122 HRES1P13985 223 aa3.92□□□□□ -1.78
LMO3-202ENST00000320122 PLAC8Q9NZF1 115 aa3.92□□□□□ -1.78
LMO3-202ENST00000320122 SVEP1Q4LDE5 3571 aa3.92□□□□□ -1.78
LMO3-202ENST00000320122 SPACA4Q8TDM5 124 aa3.91□□□□□ -1.78
LMO3-202ENST00000320122 SPINK1P00995 79 aa3.91□□□□□ -1.78
LMO3-202ENST00000320122 Q96NJ1 140 aa3.91□□□□□ -1.78
LMO3-202ENST00000320122 SRRM2Q9UQ35 2752 aaKnown RBP3.9□□□□□ -1.79
LMO3-202ENST00000320122 KRTAP16-1A8MUX0 517 aa3.89□□□□□ -1.79
LMO3-202ENST00000320122 IGLV5-52A0A0A0MRZ9 124 aa3.89□□□□□ -1.79
LMO3-202ENST00000320122 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
LMO3-202ENST00000320122 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
LMO3-202ENST00000320122 ANK3Q12955 4377 aaKnown RBP3.89□□□□□ -1.79
LMO3-202ENST00000320122 DMAC1Q96GE9 116 aa3.87□□□□□ -1.79
LMO3-202ENST00000320122 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
LMO3-202ENST00000320122 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
LMO3-202ENST00000320122 AKAP9Q99996 3911 aa3.87□□□□□ -1.79
LMO3-202ENST00000320122 A0A087WTM6 91 aa3.86□□□□□ -1.79
LMO3-202ENST00000320122 PSORS1C2Q9UIG4 136 aa3.86□□□□□ -1.79
LMO3-202ENST00000320122 RTL8CO15255 209 aa3.86□□□□□ -1.79
LMO3-202ENST00000320122 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
LMO3-202ENST00000320122 CIRBP-AS1Q8TBR5 109 aa3.86□□□□□ -1.79
LMO3-202ENST00000320122 FLG2Q5D862 2391 aaPredicted RBP3.85□□□□□ -1.79
LMO3-202ENST00000320122 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
LMO3-202ENST00000320122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.83□□□□□ -1.8
LMO3-202ENST00000320122 Q6ZRN7 208 aaPredicted RBP3.83□□□□□ -1.8
LMO3-202ENST00000320122 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
LMO3-202ENST00000320122 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
LMO3-202ENST00000320122 Q5W150 140 aa3.81□□□□□ -1.8
LMO3-202ENST00000320122 VPS13CQ709C8 3753 aa3.81□□□□□ -1.8
LMO3-202ENST00000320122 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
LMO3-202ENST00000320122 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
LMO3-202ENST00000320122 ZNF469Q96JG9 3925 aaPredicted RBP3.8□□□□□ -1.8
LMO3-202ENST00000320122 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 PANO1I0J062 215 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 ROMO1P60602 79 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
LMO3-202ENST00000320122 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
LMO3-202ENST00000320122 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
LMO3-202ENST00000320122 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
LMO3-202ENST00000320122 ANAPC11Q9NYG5 84 aa3.76□□□□□ -1.81
LMO3-202ENST00000320122 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
LMO3-202ENST00000320122 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
LMO3-202ENST00000320122 J3QL48 77 aa3.71□□□□□ -1.82
LMO3-202ENST00000320122 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
LMO3-202ENST00000320122 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
LMO3-202ENST00000320122 TYMSOSQ8TAI1 123 aa3.69□□□□□ -1.82
LMO3-202ENST00000320122 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
LMO3-202ENST00000320122 A0A1B0GU33 70 aa3.65□□□□□ -1.82
LMO3-202ENST00000320122 LINC00304Q8N9R0 145 aa3.65□□□□□ -1.82
LMO3-202ENST00000320122 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
LMO3-202ENST00000320122 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
LMO3-202ENST00000320122 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
LMO3-202ENST00000320122 Q6ZSA8 131 aa3.62□□□□□ -1.83
LMO3-202ENST00000320122 A8MUU9 505 aa3.61□□□□□ -1.83
LMO3-202ENST00000320122 Q8N1X5 172 aa3.61□□□□□ -1.83
LMO3-202ENST00000320122 A0A0D9SG42 100 aa3.6□□□□□ -1.83
LMO3-202ENST00000320122 H1FX-AS1Q4G0G2 97 aa3.6□□□□□ -1.83
LMO3-202ENST00000320122 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.83
LMO3-202ENST00000320122 DNAH3Q8TD57 4116 aa3.59□□□□□ -1.84
LMO3-202ENST00000320122 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
LMO3-202ENST00000320122 KRTAP10-2P60368 255 aa3.56□□□□□ -1.84
LMO3-202ENST00000320122 KRTAP10-1P60331 282 aa3.56□□□□□ -1.84
LMO3-202ENST00000320122 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
LMO3-202ENST00000320122 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
LMO3-202ENST00000320122 H0YAA0 97 aa3.52□□□□□ -1.85
LMO3-202ENST00000320122 Q5VSD8 79 aa3.52□□□□□ -1.85
LMO3-202ENST00000320122 DYNC2H1Q8NCM8 4307 aaKnown RBP3.52□□□□□ -1.85
LMO3-202ENST00000320122 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
LMO3-202ENST00000320122 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
LMO3-202ENST00000320122 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
LMO3-202ENST00000320122 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
LMO3-202ENST00000320122 CMYA5Q8N3K9 4069 aa3.48□□□□□ -1.85
LMO3-202ENST00000320122 DNAH17Q9UFH2 4485 aa3.47□□□□□ -1.85
LMO3-202ENST00000320122 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
LMO3-202ENST00000320122 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
LMO3-202ENST00000320122 DNAH10Q8IVF4 4471 aa3.46□□□□□ -1.85
LMO3-202ENST00000320122 ANK2Q01484 3957 aa3.45□□□□□ -1.86
LMO3-202ENST00000320122 P0C880 135 aa3.43□□□□□ -1.86
LMO3-202ENST00000320122 S4R3F8 94 aa3.42□□□□□ -1.86
LMO3-202ENST00000320122 PRKDCP78527 4128 aaKnown RBP3.42□□□□□ -1.86
LMO3-202ENST00000320122 DNAH8Q96JB1 4490 aa3.42□□□□□ -1.86
LMO3-202ENST00000320122 KRTAP3-1Q9BYR8 98 aa3.41□□□□□ -1.86
LMO3-202ENST00000320122 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.86
LMO3-202ENST00000320122 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
LMO3-202ENST00000320122 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
LMO3-202ENST00000320122 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
LMO3-202ENST00000320122 M0QZ58 72 aa3.36□□□□□ -1.87
LMO3-202ENST00000320122 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
LMO3-202ENST00000320122 DNAH2Q9P225 4427 aa3.34□□□□□ -1.87
LMO3-202ENST00000320122 KRTAP4-5Q9BYR2 181 aa3.33□□□□□ -1.88
LMO3-202ENST00000320122 A0A1B0GVY2 172 aa3.32□□□□□ -1.88
LMO3-202ENST00000320122 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
LMO3-202ENST00000320122 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
LMO3-202ENST00000320122 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
LMO3-202ENST00000320122 DNAH11Q96DT5 4516 aa3.32□□□□□ -1.88
LMO3-202ENST00000320122 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms