RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 C1orf195Q5TG92 126 aa7.84□□□□□ -1.15
NBPF3-201ENST00000318220 KRTAP11-1Q8IUC1 163 aa7.83□□□□□ -1.16
NBPF3-201ENST00000318220 H3BPC8 53 aa7.83□□□□□ -1.16
NBPF3-201ENST00000318220 SPINK7P58062 85 aa7.82□□□□□ -1.16
NBPF3-201ENST00000318220 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
NBPF3-201ENST00000318220 A0A0D9SG42 100 aa7.79□□□□□ -1.16
NBPF3-201ENST00000318220 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
NBPF3-201ENST00000318220 SPRR1BP22528 89 aa7.76□□□□□ -1.17
NBPF3-201ENST00000318220 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
NBPF3-201ENST00000318220 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
NBPF3-201ENST00000318220 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
NBPF3-201ENST00000318220 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
NBPF3-201ENST00000318220 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
NBPF3-201ENST00000318220 COA5Q86WW8 74 aa7.69□□□□□ -1.18
NBPF3-201ENST00000318220 BSNQ9UPA5 3926 aa7.68□□□□□ -1.18
NBPF3-201ENST00000318220 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
NBPF3-201ENST00000318220 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
NBPF3-201ENST00000318220 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
NBPF3-201ENST00000318220 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
NBPF3-201ENST00000318220 KRTAP4-16G5E9R7 235 aaPredicted RBP7.63□□□□□ -1.19
NBPF3-201ENST00000318220 HRES1P13985 223 aa7.63□□□□□ -1.19
NBPF3-201ENST00000318220 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
NBPF3-201ENST00000318220 PMAIP1Q13794 54 aa7.62□□□□□ -1.19
NBPF3-201ENST00000318220 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
NBPF3-201ENST00000318220 TRRAPQ9Y4A5 3859 aa7.6□□□□□ -1.19
NBPF3-201ENST00000318220 S4R3F8 94 aa7.58□□□□□ -1.2
NBPF3-201ENST00000318220 R4GN34 69 aa7.58□□□□□ -1.2
NBPF3-201ENST00000318220 Q5W150 140 aa7.56□□□□□ -1.2
NBPF3-201ENST00000318220 UQCR11O14957 56 aa7.54□□□□□ -1.2
NBPF3-201ENST00000318220 NOTCH2NLQ7Z3S9 236 aa7.52□□□□□ -1.21
NBPF3-201ENST00000318220 A8MUN3 132 aa7.51□□□□□ -1.21
NBPF3-201ENST00000318220 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
NBPF3-201ENST00000318220 Q1T7F1 81 aa7.49□□□□□ -1.21
NBPF3-201ENST00000318220 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
NBPF3-201ENST00000318220 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.21
NBPF3-201ENST00000318220 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
NBPF3-201ENST00000318220 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
NBPF3-201ENST00000318220 LCA10Q71F78 164 aa7.42□□□□□ -1.22
NBPF3-201ENST00000318220 M0QZ58 72 aa7.4□□□□□ -1.22
NBPF3-201ENST00000318220 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
NBPF3-201ENST00000318220 A0A1B0GU33 70 aa7.38□□□□□ -1.23
NBPF3-201ENST00000318220 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
NBPF3-201ENST00000318220 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
NBPF3-201ENST00000318220 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
NBPF3-201ENST00000318220 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
NBPF3-201ENST00000318220 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
NBPF3-201ENST00000318220 VPS13CQ709C8 3753 aa7.34□□□□□ -1.23
NBPF3-201ENST00000318220 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
NBPF3-201ENST00000318220 Q75L30 129 aa7.3□□□□□ -1.24
NBPF3-201ENST00000318220 Q5VV11 94 aa7.29□□□□□ -1.24
NBPF3-201ENST00000318220 DNHD1Q96M86 4753 aa7.29□□□□□ -1.24
NBPF3-201ENST00000318220 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
NBPF3-201ENST00000318220 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
NBPF3-201ENST00000318220 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
NBPF3-201ENST00000318220 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
NBPF3-201ENST00000318220 XP32Q5T750 250 aa7.26□□□□□ -1.25
NBPF3-201ENST00000318220 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
NBPF3-201ENST00000318220 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
NBPF3-201ENST00000318220 A8MU10 97 aa7.19□□□□□ -1.26
NBPF3-201ENST00000318220 ANK3Q12955 4377 aaKnown RBP7.18□□□□□ -1.26
NBPF3-201ENST00000318220 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
NBPF3-201ENST00000318220 A8MUU9 505 aa7.15□□□□□ -1.26
NBPF3-201ENST00000318220 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
NBPF3-201ENST00000318220 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
NBPF3-201ENST00000318220 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
NBPF3-201ENST00000318220 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
NBPF3-201ENST00000318220 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.28
NBPF3-201ENST00000318220 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
NBPF3-201ENST00000318220 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
NBPF3-201ENST00000318220 A6NN06 94 aa7.04□□□□□ -1.28
NBPF3-201ENST00000318220 AKAP9Q99996 3911 aa7□□□□□ -1.29
NBPF3-201ENST00000318220 ZNF469Q96JG9 3925 aaPredicted RBP6.93□□□□□ -1.3
NBPF3-201ENST00000318220 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
NBPF3-201ENST00000318220 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
NBPF3-201ENST00000318220 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
NBPF3-201ENST00000318220 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
NBPF3-201ENST00000318220 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.33
NBPF3-201ENST00000318220 ROMO1P60602 79 aa6.67□□□□□ -1.34
NBPF3-201ENST00000318220 TNP1P09430 55 aa6.66□□□□□ -1.34
NBPF3-201ENST00000318220 H3BS24 57 aa6.65□□□□□ -1.34
NBPF3-201ENST00000318220 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
NBPF3-201ENST00000318220 P0C880 135 aa6.59□□□□□ -1.35
NBPF3-201ENST00000318220 RYR1P21817 5038 aa6.57□□□□□ -1.36
NBPF3-201ENST00000318220 HUWE1Q7Z6Z7 4374 aaKnown RBP6.57□□□□□ -1.36
NBPF3-201ENST00000318220 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
NBPF3-201ENST00000318220 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
NBPF3-201ENST00000318220 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
NBPF3-201ENST00000318220 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
NBPF3-201ENST00000318220 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
NBPF3-201ENST00000318220 HYDINQ4G0P3 5121 aa6.43□□□□□ -1.38
NBPF3-201ENST00000318220 FAT1Q14517 4588 aa6.41□□□□□ -1.38
NBPF3-201ENST00000318220 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
NBPF3-201ENST00000318220 DNAH10Q8IVF4 4471 aa6.37□□□□□ -1.39
NBPF3-201ENST00000318220 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
NBPF3-201ENST00000318220 H0YAA0 97 aa6.33□□□□□ -1.4
NBPF3-201ENST00000318220 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
NBPF3-201ENST00000318220 RYR3Q15413 4870 aa6.32□□□□□ -1.4
NBPF3-201ENST00000318220 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
NBPF3-201ENST00000318220 ANK2Q01484 3957 aa6.27□□□□□ -1.41
NBPF3-201ENST00000318220 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms