RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
XCR1-201ENST00000309285 ZNF861PO60384 105 aa5.91□□□□□ -1.46
XCR1-201ENST00000309285 IGLV5-37A0A075B6J1 123 aa5.91□□□□□ -1.46
XCR1-201ENST00000309285 A0A1B0GU33 70 aa5.9□□□□□ -1.46
XCR1-201ENST00000309285 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
XCR1-201ENST00000309285 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
XCR1-201ENST00000309285 TLX1NBP0CAT3 122 aa5.9□□□□□ -1.47
XCR1-201ENST00000309285 TRRAPQ9Y4A5 3859 aa5.89□□□□□ -1.47
XCR1-201ENST00000309285 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
XCR1-201ENST00000309285 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
XCR1-201ENST00000309285 PSORS1C2Q9UIG4 136 aa5.87□□□□□ -1.47
XCR1-201ENST00000309285 KRTAP26-1Q6PEX3 210 aa5.86□□□□□ -1.47
XCR1-201ENST00000309285 ANK3Q12955 4377 aaKnown RBP5.86□□□□□ -1.47
XCR1-201ENST00000309285 Q8N1X5 172 aa5.83□□□□□ -1.48
XCR1-201ENST00000309285 TNP2Q05952 138 aa5.82□□□□□ -1.48
XCR1-201ENST00000309285 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
XCR1-201ENST00000309285 A8MU10 97 aa5.8□□□□□ -1.48
XCR1-201ENST00000309285 TENM2Q9NT68 2774 aa5.79□□□□□ -1.48
XCR1-201ENST00000309285 HRES1P13985 223 aa5.79□□□□□ -1.48
XCR1-201ENST00000309285 KRTAP1-5Q9BYS1 174 aa5.79□□□□□ -1.48
XCR1-201ENST00000309285 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
XCR1-201ENST00000309285 ASB16-AS1Q495Z4 193 aa5.77□□□□□ -1.49
XCR1-201ENST00000309285 ROMO1P60602 79 aa5.75□□□□□ -1.49
XCR1-201ENST00000309285 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
XCR1-201ENST00000309285 A6NN06 94 aa5.74□□□□□ -1.49
XCR1-201ENST00000309285 AKAP9Q99996 3911 aa5.72□□□□□ -1.49
XCR1-201ENST00000309285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
XCR1-201ENST00000309285 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
XCR1-201ENST00000309285 MMP24-AS1A0A0U1RRL7 71 aa5.71□□□□□ -1.5
XCR1-201ENST00000309285 SPRR1AP35321 89 aa5.71□□□□□ -1.5
XCR1-201ENST00000309285 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
XCR1-201ENST00000309285 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
XCR1-201ENST00000309285 Q6ZSA8 131 aa5.69□□□□□ -1.5
XCR1-201ENST00000309285 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
XCR1-201ENST00000309285 M0R2T5 61 aa5.67□□□□□ -1.5
XCR1-201ENST00000309285 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
XCR1-201ENST00000309285 TGP01266 2768 aa5.66□□□□□ -1.5
XCR1-201ENST00000309285 KRTAP4-16G5E9R7 235 aaPredicted RBP5.65□□□□□ -1.5
XCR1-201ENST00000309285 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
XCR1-201ENST00000309285 LINC00472Q9H8W2 130 aa5.61□□□□□ -1.51
XCR1-201ENST00000309285 PANO1I0J062 215 aa5.61□□□□□ -1.51
XCR1-201ENST00000309285 R4GN34 69 aa5.6□□□□□ -1.51
XCR1-201ENST00000309285 S4R3F8 94 aa5.59□□□□□ -1.52
XCR1-201ENST00000309285 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
XCR1-201ENST00000309285 KRTAP11-1Q8IUC1 163 aa5.57□□□□□ -1.52
XCR1-201ENST00000309285 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
XCR1-201ENST00000309285 Q5W150 140 aa5.55□□□□□ -1.52
XCR1-201ENST00000309285 Q6ZRN7 208 aaPredicted RBP5.54□□□□□ -1.52
XCR1-201ENST00000309285 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
XCR1-201ENST00000309285 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
XCR1-201ENST00000309285 LCE6AA0A183 80 aa5.53□□□□□ -1.52
XCR1-201ENST00000309285 SPRR1BP22528 89 aa5.53□□□□□ -1.52
XCR1-201ENST00000309285 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
XCR1-201ENST00000309285 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
XCR1-201ENST00000309285 Q6ZR54 194 aa5.51□□□□□ -1.53
XCR1-201ENST00000309285 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
XCR1-201ENST00000309285 KRTAP10-2P60368 255 aa5.49□□□□□ -1.53
XCR1-201ENST00000309285 Q5VSD8 79 aa5.48□□□□□ -1.53
XCR1-201ENST00000309285 KRTAP10-1P60331 282 aa5.48□□□□□ -1.53
XCR1-201ENST00000309285 M0QZ58 72 aa5.46□□□□□ -1.54
XCR1-201ENST00000309285 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
XCR1-201ENST00000309285 A0A087X002 238 aa5.4□□□□□ -1.54
XCR1-201ENST00000309285 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
XCR1-201ENST00000309285 COL7A1Q02388 2944 aa5.39□□□□□ -1.55
XCR1-201ENST00000309285 FBN3Q75N90 2809 aa5.39□□□□□ -1.55
XCR1-201ENST00000309285 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
XCR1-201ENST00000309285 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
XCR1-201ENST00000309285 A8MUU9 505 aa5.35□□□□□ -1.55
XCR1-201ENST00000309285 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
XCR1-201ENST00000309285 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
XCR1-201ENST00000309285 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
XCR1-201ENST00000309285 ANK2Q01484 3957 aa5.27□□□□□ -1.57
XCR1-201ENST00000309285 KRTAP13-2Q52LG2 175 aa5.24□□□□□ -1.57
XCR1-201ENST00000309285 KRTAP21-3Q3LHN1 58 aa5.22□□□□□ -1.57
XCR1-201ENST00000309285 DNAH9Q9NYC9 4486 aa5.22□□□□□ -1.57
XCR1-201ENST00000309285 TNP1P09430 55 aa5.19□□□□□ -1.58
XCR1-201ENST00000309285 DNAH10Q8IVF4 4471 aa5.17□□□□□ -1.58
XCR1-201ENST00000309285 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
XCR1-201ENST00000309285 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
XCR1-201ENST00000309285 PRKDCP78527 4128 aaKnown RBP5.09□□□□□ -1.59
XCR1-201ENST00000309285 H0YAA0 97 aa5.09□□□□□ -1.59
XCR1-201ENST00000309285 CMYA5Q8N3K9 4069 aa5.09□□□□□ -1.59
XCR1-201ENST00000309285 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
XCR1-201ENST00000309285 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
XCR1-201ENST00000309285 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
XCR1-201ENST00000309285 P0C880 135 aa5.05□□□□□ -1.6
XCR1-201ENST00000309285 LYSTQ99698 3801 aa5.05□□□□□ -1.6
XCR1-201ENST00000309285 DNAH1Q9P2D7 4330 aa5.04□□□□□ -1.6
XCR1-201ENST00000309285 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.61
XCR1-201ENST00000309285 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
XCR1-201ENST00000309285 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
XCR1-201ENST00000309285 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
XCR1-201ENST00000309285 A0A1B0GVY2 172 aa4.94□□□□□ -1.62
XCR1-201ENST00000309285 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
XCR1-201ENST00000309285 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
XCR1-201ENST00000309285 DNAH17Q9UFH2 4485 aa4.89□□□□□ -1.63
XCR1-201ENST00000309285 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
XCR1-201ENST00000309285 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
XCR1-201ENST00000309285 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
XCR1-201ENST00000309285 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms