RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ATOX1O00244 68 aa9.98□□□□□ -0.81
TMEM88-201ENST00000301599 TRBV7-4A0A0J9YYF1 115 aa9.97□□□□□ -0.81
TMEM88-201ENST00000301599 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
TMEM88-201ENST00000301599 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
TMEM88-201ENST00000301599 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
TMEM88-201ENST00000301599 A0A0G2JQZ4 141 aa9.94□□□□□ -0.82
TMEM88-201ENST00000301599 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
TMEM88-201ENST00000301599 CXCL6P80162 114 aa9.92□□□□□ -0.82
TMEM88-201ENST00000301599 PCOTHQ58A44 107 aa9.92□□□□□ -0.82
TMEM88-201ENST00000301599 F8WEM9 126 aa9.91□□□□□ -0.82
TMEM88-201ENST00000301599 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
TMEM88-201ENST00000301599 IGKV3D-7A0A0C4DH55 119 aa9.88□□□□□ -0.83
TMEM88-201ENST00000301599 IGLV8-61A0A075B6I0 122 aa9.87□□□□□ -0.83
TMEM88-201ENST00000301599 UQCRQO14949 82 aa9.87□□□□□ -0.83
TMEM88-201ENST00000301599 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
TMEM88-201ENST00000301599 Q6ZVQ6 151 aa9.85□□□□□ -0.83
TMEM88-201ENST00000301599 COX7CP15954 63 aa9.82□□□□□ -0.84
TMEM88-201ENST00000301599 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
TMEM88-201ENST00000301599 NREPQ16612 68 aa9.8□□□□□ -0.84
TMEM88-201ENST00000301599 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
TMEM88-201ENST00000301599 IGFL1Q6UW32 110 aa9.79□□□□□ -0.84
TMEM88-201ENST00000301599 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
TMEM88-201ENST00000301599 CCDC179H3BU77 68 aa9.76□□□□□ -0.85
TMEM88-201ENST00000301599 KRTAP19-2Q3LHN2 52 aa9.76□□□□□ -0.85
TMEM88-201ENST00000301599 A0A087WVE0 104 aa9.71□□□□□ -0.86
TMEM88-201ENST00000301599 KRTAP9-6A0A140TA67 174 aa9.71□□□□□ -0.86
TMEM88-201ENST00000301599 BPY2O14599 106 aa9.71□□□□□ -0.86
TMEM88-201ENST00000301599 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
TMEM88-201ENST00000301599 MT1HP80294 61 aa9.7□□□□□ -0.86
TMEM88-201ENST00000301599 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
TMEM88-201ENST00000301599 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
TMEM88-201ENST00000301599 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
TMEM88-201ENST00000301599 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
TMEM88-201ENST00000301599 COX6B2Q6YFQ2 88 aa9.62□□□□□ -0.87
TMEM88-201ENST00000301599 Q75L30 129 aa9.61□□□□□ -0.87
TMEM88-201ENST00000301599 TMEM258P61165 79 aa9.6□□□□□ -0.87
TMEM88-201ENST00000301599 Q96NJ1 140 aa9.58□□□□□ -0.88
TMEM88-201ENST00000301599 NDUFC1O43677 76 aa9.57□□□□□ -0.88
TMEM88-201ENST00000301599 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
TMEM88-201ENST00000301599 M0R2T5 61 aa9.56□□□□□ -0.88
TMEM88-201ENST00000301599 A0A087WSZ3 146 aa9.54□□□□□ -0.88
TMEM88-201ENST00000301599 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
TMEM88-201ENST00000301599 J3KT08 172 aa9.52□□□□□ -0.89
TMEM88-201ENST00000301599 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
TMEM88-201ENST00000301599 KLKP1Q107X0 134 aa9.51□□□□□ -0.89
TMEM88-201ENST00000301599 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
TMEM88-201ENST00000301599 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
TMEM88-201ENST00000301599 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
TMEM88-201ENST00000301599 CRCT1Q9UGL9 99 aa9.48□□□□□ -0.89
TMEM88-201ENST00000301599 A8MUU9 505 aa9.47□□□□□ -0.89
TMEM88-201ENST00000301599 ATP5EP56381 51 aaPredicted RBP9.46□□□□□ -0.9
TMEM88-201ENST00000301599 DSCR10P59022 87 aa9.44□□□□□ -0.9
TMEM88-201ENST00000301599 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
TMEM88-201ENST00000301599 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
TMEM88-201ENST00000301599 Q8N9L7 120 aa9.42□□□□□ -0.9
TMEM88-201ENST00000301599 NDUFB1O75438 58 aa9.41□□□□□ -0.9
TMEM88-201ENST00000301599 TMEM254Q8TBM7 123 aa9.41□□□□□ -0.9
TMEM88-201ENST00000301599 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
TMEM88-201ENST00000301599 LINC00313P59037 77 aa9.4□□□□□ -0.9
TMEM88-201ENST00000301599 K7EQZ3 153 aa9.39□□□□□ -0.91
TMEM88-201ENST00000301599 C5orf47Q569G3 176 aa9.39□□□□□ -0.91
TMEM88-201ENST00000301599 A8MWP4 228 aa9.38□□□□□ -0.91
TMEM88-201ENST00000301599 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
TMEM88-201ENST00000301599 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
TMEM88-201ENST00000301599 FSIP2Q5CZC0 6907 aa9.37□□□□□ -0.91
TMEM88-201ENST00000301599 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
TMEM88-201ENST00000301599 H7BZZ5 65 aa9.35□□□□□ -0.91
TMEM88-201ENST00000301599 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
TMEM88-201ENST00000301599 H3BPC8 53 aa9.33□□□□□ -0.92
TMEM88-201ENST00000301599 DEFB116Q30KQ4 102 aa9.32□□□□□ -0.92
TMEM88-201ENST00000301599 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
TMEM88-201ENST00000301599 MP68P56378 58 aa9.3□□□□□ -0.92
TMEM88-201ENST00000301599 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
TMEM88-201ENST00000301599 CYSTM1Q9H1C7 97 aa9.3□□□□□ -0.92
TMEM88-201ENST00000301599 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
TMEM88-201ENST00000301599 SNURFQ9Y675 71 aa9.29□□□□□ -0.92
TMEM88-201ENST00000301599 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
TMEM88-201ENST00000301599 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
TMEM88-201ENST00000301599 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
TMEM88-201ENST00000301599 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
TMEM88-201ENST00000301599 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
TMEM88-201ENST00000301599 A0A1B0GVX0 72 aa9.2□□□□□ -0.94
TMEM88-201ENST00000301599 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
TMEM88-201ENST00000301599 RBM12B-AS1Q9P1G2 102 aa9.19□□□□□ -0.94
TMEM88-201ENST00000301599 ZCCHC13Q8WW36 166 aaKnown RBP9.18□□□□□ -0.94
TMEM88-201ENST00000301599 KRTAP9-8Q9BYQ0 159 aa9.18□□□□□ -0.94
TMEM88-201ENST00000301599 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
TMEM88-201ENST00000301599 HRES1P13985 223 aa9.15□□□□□ -0.94
TMEM88-201ENST00000301599 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
TMEM88-201ENST00000301599 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
TMEM88-201ENST00000301599 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
TMEM88-201ENST00000301599 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
TMEM88-201ENST00000301599 H0Y9P7 68 aa9.12□□□□□ -0.95
TMEM88-201ENST00000301599 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
TMEM88-201ENST00000301599 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
TMEM88-201ENST00000301599 LINC00208Q96KT6 92 aa9.08□□□□□ -0.96
TMEM88-201ENST00000301599 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
TMEM88-201ENST00000301599 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
TMEM88-201ENST00000301599 C1orf64Q8NEQ6 169 aa9.05□□□□□ -0.96
TMEM88-201ENST00000301599 SPINK7P58062 85 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms