RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
CHAF1A-201ENST00000301280 DMBT1Q9UGM3 2413 aaPredicted RBP9.3□□□□□ -0.92
CHAF1A-201ENST00000301280 Q6ZR54 194 aa9.3□□□□□ -0.92
CHAF1A-201ENST00000301280 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
CHAF1A-201ENST00000301280 A8MUN3 132 aa9.28□□□□□ -0.92
CHAF1A-201ENST00000301280 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
CHAF1A-201ENST00000301280 KRTAP10-1P60331 282 aa9.28□□□□□ -0.92
CHAF1A-201ENST00000301280 ALMS1Q8TCU4 4167 aa9.26□□□□□ -0.93
CHAF1A-201ENST00000301280 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
CHAF1A-201ENST00000301280 PLAC8Q9NZF1 115 aa9.24□□□□□ -0.93
CHAF1A-201ENST00000301280 Q96NJ1 140 aa9.23□□□□□ -0.93
CHAF1A-201ENST00000301280 A0A1B0GVX0 72 aa9.22□□□□□ -0.93
CHAF1A-201ENST00000301280 Q5VV11 94 aa9.22□□□□□ -0.93
CHAF1A-201ENST00000301280 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.94
CHAF1A-201ENST00000301280 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
CHAF1A-201ENST00000301280 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 H3BPC8 53 aa9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
CHAF1A-201ENST00000301280 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
CHAF1A-201ENST00000301280 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
CHAF1A-201ENST00000301280 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
CHAF1A-201ENST00000301280 IGKV2-30P06310 120 aa9.16□□□□□ -0.94
CHAF1A-201ENST00000301280 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
CHAF1A-201ENST00000301280 CD164Q04900 197 aa9.15□□□□□ -0.94
CHAF1A-201ENST00000301280 PKD1P98161 4303 aa9.15□□□□□ -0.95
CHAF1A-201ENST00000301280 Q5W150 140 aa9.14□□□□□ -0.95
CHAF1A-201ENST00000301280 SPANXA2-OT1Q8N9U9 137 aa9.13□□□□□ -0.95
CHAF1A-201ENST00000301280 HYDINQ4G0P3 5121 aa9.13□□□□□ -0.95
CHAF1A-201ENST00000301280 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
CHAF1A-201ENST00000301280 COA5Q86WW8 74 aa9.12□□□□□ -0.95
CHAF1A-201ENST00000301280 PRR26Q8N8Z3 221 aa9.1□□□□□ -0.95
CHAF1A-201ENST00000301280 SPINK1P00995 79 aa9.09□□□□□ -0.95
CHAF1A-201ENST00000301280 LINC00313P59037 77 aa9.09□□□□□ -0.95
CHAF1A-201ENST00000301280 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
CHAF1A-201ENST00000301280 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
CHAF1A-201ENST00000301280 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
CHAF1A-201ENST00000301280 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
CHAF1A-201ENST00000301280 LCA10Q71F78 164 aa9.06□□□□□ -0.96
CHAF1A-201ENST00000301280 A6NED7 52 aa9.06□□□□□ -0.96
CHAF1A-201ENST00000301280 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
CHAF1A-201ENST00000301280 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
CHAF1A-201ENST00000301280 LIMD2Q9BT23 127 aa9□□□□□ -0.97
CHAF1A-201ENST00000301280 FAT1Q14517 4588 aa9□□□□□ -0.97
CHAF1A-201ENST00000301280 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
CHAF1A-201ENST00000301280 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
CHAF1A-201ENST00000301280 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
CHAF1A-201ENST00000301280 Q75L30 129 aa8.96□□□□□ -0.98
CHAF1A-201ENST00000301280 HRES1P13985 223 aa8.95□□□□□ -0.98
CHAF1A-201ENST00000301280 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
CHAF1A-201ENST00000301280 Q8N1X5 172 aa8.93□□□□□ -0.98
CHAF1A-201ENST00000301280 Q6ZSA8 131 aa8.93□□□□□ -0.98
CHAF1A-201ENST00000301280 SPINK7P58062 85 aa8.88□□□□□ -0.99
CHAF1A-201ENST00000301280 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
CHAF1A-201ENST00000301280 LINC01558Q9Y6Z2 57 aa8.87□□□□□ -0.99
CHAF1A-201ENST00000301280 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
CHAF1A-201ENST00000301280 A6NN06 94 aa8.86□□□□□ -0.99
CHAF1A-201ENST00000301280 LINC00304Q8N9R0 145 aa8.86□□□□□ -0.99
CHAF1A-201ENST00000301280 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
CHAF1A-201ENST00000301280 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
CHAF1A-201ENST00000301280 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
CHAF1A-201ENST00000301280 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
CHAF1A-201ENST00000301280 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
CHAF1A-201ENST00000301280 FAM229AH3BQW9 127 aa8.82□□□□□ -1
CHAF1A-201ENST00000301280 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
CHAF1A-201ENST00000301280 H3BS24 57 aa8.79□□□□□ -1
CHAF1A-201ENST00000301280 C8orf87E5RJ46 101 aa8.79□□□□□ -1
CHAF1A-201ENST00000301280 ACYP2P14621 99 aa8.79□□□□□ -1
CHAF1A-201ENST00000301280 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
CHAF1A-201ENST00000301280 MYCBP2O75592 4640 aa8.73□□□□□ -1.01
CHAF1A-201ENST00000301280 KMT2CQ8NEZ4 4911 aaKnown RBP8.73□□□□□ -1.01
CHAF1A-201ENST00000301280 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
CHAF1A-201ENST00000301280 DYNC1H1Q14204 4646 aaKnown RBP8.71□□□□□ -1.02
CHAF1A-201ENST00000301280 A0A1B0GU69 56 aa8.7□□□□□ -1.02
CHAF1A-201ENST00000301280 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
CHAF1A-201ENST00000301280 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.02
CHAF1A-201ENST00000301280 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
CHAF1A-201ENST00000301280 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
CHAF1A-201ENST00000301280 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
CHAF1A-201ENST00000301280 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
CHAF1A-201ENST00000301280 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
CHAF1A-201ENST00000301280 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
CHAF1A-201ENST00000301280 KIAA1109Q2LD37 5005 aa8.5□□□□□ -1.05
CHAF1A-201ENST00000301280 Q5VSD8 79 aa8.5□□□□□ -1.05
CHAF1A-201ENST00000301280 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
CHAF1A-201ENST00000301280 A0A1B0GVY2 172 aa8.46□□□□□ -1.06
CHAF1A-201ENST00000301280 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
CHAF1A-201ENST00000301280 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CHAF1A-201ENST00000301280 UQCR11O14957 56 aa8.4□□□□□ -1.06
CHAF1A-201ENST00000301280 RYR2Q92736 4967 aa8.39□□□□□ -1.07
CHAF1A-201ENST00000301280 TNXBP22105 4242 aa8.36□□□□□ -1.07
CHAF1A-201ENST00000301280 RYR3Q15413 4870 aa8.36□□□□□ -1.07
CHAF1A-201ENST00000301280 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
CHAF1A-201ENST00000301280 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
CHAF1A-201ENST00000301280 A0A0D9SG42 100 aa8.32□□□□□ -1.08
CHAF1A-201ENST00000301280 A8MUU9 505 aa8.31□□□□□ -1.08
CHAF1A-201ENST00000301280 RYR1P21817 5038 aa8.31□□□□□ -1.08
CHAF1A-201ENST00000301280 HSPG2P98160 4391 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms