RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
CDT1-201ENST00000301019 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
CDT1-201ENST00000301019 A0A0A0MQY5 61 aa8.65□□□□□ -1.02
CDT1-201ENST00000301019 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.02
CDT1-201ENST00000301019 TP53AIP1Q9HCN2 124 aa8.65□□□□□ -1.02
CDT1-201ENST00000301019 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
CDT1-201ENST00000301019 Q96NJ1 140 aa8.64□□□□□ -1.03
CDT1-201ENST00000301019 TGP01266 2768 aa8.64□□□□□ -1.03
CDT1-201ENST00000301019 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
CDT1-201ENST00000301019 PANO1I0J062 215 aa8.62□□□□□ -1.03
CDT1-201ENST00000301019 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
CDT1-201ENST00000301019 ACYP2P14621 99 aa8.61□□□□□ -1.03
CDT1-201ENST00000301019 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
CDT1-201ENST00000301019 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
CDT1-201ENST00000301019 H3BNG1 76 aa8.56□□□□□ -1.04
CDT1-201ENST00000301019 UQCR11O14957 56 aa8.56□□□□□ -1.04
CDT1-201ENST00000301019 DNHD1Q96M86 4753 aa8.55□□□□□ -1.04
CDT1-201ENST00000301019 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
CDT1-201ENST00000301019 DNAH9Q9NYC9 4486 aa8.53□□□□□ -1.04
CDT1-201ENST00000301019 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.04
CDT1-201ENST00000301019 IGKV2-30P06310 120 aa8.52□□□□□ -1.04
CDT1-201ENST00000301019 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.04
CDT1-201ENST00000301019 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
CDT1-201ENST00000301019 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
CDT1-201ENST00000301019 HUWE1Q7Z6Z7 4374 aaKnown RBP8.48□□□□□ -1.05
CDT1-201ENST00000301019 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
CDT1-201ENST00000301019 FBN3Q75N90 2809 aa8.47□□□□□ -1.05
CDT1-201ENST00000301019 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
CDT1-201ENST00000301019 SPRR1BP22528 89 aa8.45□□□□□ -1.06
CDT1-201ENST00000301019 ZNF861PO60384 105 aa8.42□□□□□ -1.06
CDT1-201ENST00000301019 DNAH1Q9P2D7 4330 aa8.42□□□□□ -1.06
CDT1-201ENST00000301019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
CDT1-201ENST00000301019 Q8N1X5 172 aa8.41□□□□□ -1.06
CDT1-201ENST00000301019 DMAC1Q96GE9 116 aa8.4□□□□□ -1.06
CDT1-201ENST00000301019 DNAH7Q8WXX0 4024 aa8.39□□□□□ -1.07
CDT1-201ENST00000301019 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
CDT1-201ENST00000301019 ALMS1Q8TCU4 4167 aa8.36□□□□□ -1.07
CDT1-201ENST00000301019 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
CDT1-201ENST00000301019 WWC2-AS2Q96NR7 200 aa8.36□□□□□ -1.07
CDT1-201ENST00000301019 PRKDCP78527 4128 aaKnown RBP8.35□□□□□ -1.07
CDT1-201ENST00000301019 ROMO1P60602 79 aa8.34□□□□□ -1.07
CDT1-201ENST00000301019 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
CDT1-201ENST00000301019 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
CDT1-201ENST00000301019 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
CDT1-201ENST00000301019 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
CDT1-201ENST00000301019 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
CDT1-201ENST00000301019 DNAH17Q9UFH2 4485 aa8.28□□□□□ -1.08
CDT1-201ENST00000301019 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
CDT1-201ENST00000301019 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
CDT1-201ENST00000301019 NUPR2A6NF83 97 aa8.25□□□□□ -1.09
CDT1-201ENST00000301019 A8MUU9 505 aa8.25□□□□□ -1.09
CDT1-201ENST00000301019 LINC00304Q8N9R0 145 aa8.25□□□□□ -1.09
CDT1-201ENST00000301019 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
CDT1-201ENST00000301019 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
CDT1-201ENST00000301019 P0C880 135 aa8.22□□□□□ -1.09
CDT1-201ENST00000301019 H0YAA0 97 aa8.22□□□□□ -1.09
CDT1-201ENST00000301019 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
CDT1-201ENST00000301019 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
CDT1-201ENST00000301019 Q6ZSA8 131 aa8.19□□□□□ -1.1
CDT1-201ENST00000301019 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
CDT1-201ENST00000301019 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
CDT1-201ENST00000301019 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
CDT1-201ENST00000301019 STARD9Q9P2P6 4700 aa8.16□□□□□ -1.1
CDT1-201ENST00000301019 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
CDT1-201ENST00000301019 NBDYA0A0U1RRE5 68 aa8.09□□□□□ -1.11
CDT1-201ENST00000301019 A0A1B0GU33 70 aa8.08□□□□□ -1.12
CDT1-201ENST00000301019 NDUFAF8A1L188 74 aa8.08□□□□□ -1.12
CDT1-201ENST00000301019 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
CDT1-201ENST00000301019 A0A0D9SG42 100 aa8.05□□□□□ -1.12
CDT1-201ENST00000301019 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
CDT1-201ENST00000301019 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
CDT1-201ENST00000301019 LY6G6CO95867 125 aa8.03□□□□□ -1.12
CDT1-201ENST00000301019 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
CDT1-201ENST00000301019 HECTD4Q9Y4D8 3996 aa8.02□□□□□ -1.13
CDT1-201ENST00000301019 Q6ZRN7 208 aaPredicted RBP8□□□□□ -1.13
CDT1-201ENST00000301019 DNAH6Q9C0G6 4158 aa7.98□□□□□ -1.13
CDT1-201ENST00000301019 A0A087WTM6 91 aa7.98□□□□□ -1.13
CDT1-201ENST00000301019 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
CDT1-201ENST00000301019 K7ERS5 55 aa7.93□□□□□ -1.14
CDT1-201ENST00000301019 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
CDT1-201ENST00000301019 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
CDT1-201ENST00000301019 DNAH11Q96DT5 4516 aa7.9□□□□□ -1.14
CDT1-201ENST00000301019 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
CDT1-201ENST00000301019 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
CDT1-201ENST00000301019 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
CDT1-201ENST00000301019 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
CDT1-201ENST00000301019 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
CDT1-201ENST00000301019 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
CDT1-201ENST00000301019 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
CDT1-201ENST00000301019 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
CDT1-201ENST00000301019 SACSQ9NZJ4 4579 aa7.74□□□□□ -1.17
CDT1-201ENST00000301019 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
CDT1-201ENST00000301019 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
CDT1-201ENST00000301019 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
CDT1-201ENST00000301019 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
CDT1-201ENST00000301019 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
CDT1-201ENST00000301019 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
CDT1-201ENST00000301019 KMT2CQ8NEZ4 4911 aaKnown RBP7.65□□□□□ -1.19
CDT1-201ENST00000301019 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
CDT1-201ENST00000301019 PKD1P98161 4303 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms