RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 KRTAP10-11P60412 298 aa5.56□□□□□ -1.52
MMP3-201ENST00000299855 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
MMP3-201ENST00000299855 LCE2CQ5TA81 110 aa5.55□□□□□ -1.52
MMP3-201ENST00000299855 DNAH9Q9NYC9 4486 aa5.55□□□□□ -1.52
MMP3-201ENST00000299855 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
MMP3-201ENST00000299855 KRTAP7-1Q8IUC3 87 aa5.53□□□□□ -1.52
MMP3-201ENST00000299855 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
MMP3-201ENST00000299855 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
MMP3-201ENST00000299855 A0A1B0GU33 70 aa5.52□□□□□ -1.53
MMP3-201ENST00000299855 FAM168BA1KXE4 195 aa5.52□□□□□ -1.53
MMP3-201ENST00000299855 NUPR2A6NF83 97 aa5.52□□□□□ -1.53
MMP3-201ENST00000299855 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
MMP3-201ENST00000299855 PLAC8Q9NZF1 115 aa5.52□□□□□ -1.53
MMP3-201ENST00000299855 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
MMP3-201ENST00000299855 COA5Q86WW8 74 aa5.51□□□□□ -1.53
MMP3-201ENST00000299855 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
MMP3-201ENST00000299855 COL7A1Q02388 2944 aa5.5□□□□□ -1.53
MMP3-201ENST00000299855 SPRR1BP22528 89 aa5.5□□□□□ -1.53
MMP3-201ENST00000299855 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
MMP3-201ENST00000299855 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
MMP3-201ENST00000299855 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
MMP3-201ENST00000299855 NBEAL2Q6ZNJ1 2754 aa5.48□□□□□ -1.53
MMP3-201ENST00000299855 Q5W150 140 aa5.46□□□□□ -1.54
MMP3-201ENST00000299855 DEFB131BA0A096LNP1 70 aa5.45□□□□□ -1.54
MMP3-201ENST00000299855 A0A0G2JQZ4 141 aa5.45□□□□□ -1.54
MMP3-201ENST00000299855 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
MMP3-201ENST00000299855 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
MMP3-201ENST00000299855 DNAH7Q8WXX0 4024 aa5.42□□□□□ -1.54
MMP3-201ENST00000299855 PRLHP81277 87 aa5.41□□□□□ -1.54
MMP3-201ENST00000299855 UQCR11O14957 56 aa5.4□□□□□ -1.55
MMP3-201ENST00000299855 SPINK7P58062 85 aa5.39□□□□□ -1.55
MMP3-201ENST00000299855 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
MMP3-201ENST00000299855 TENM3Q9P273 2699 aa5.38□□□□□ -1.55
MMP3-201ENST00000299855 HRES1P13985 223 aa5.37□□□□□ -1.55
MMP3-201ENST00000299855 PCOTHQ58A44 107 aa5.37□□□□□ -1.55
MMP3-201ENST00000299855 A0A096LNI7 61 aa5.36□□□□□ -1.55
MMP3-201ENST00000299855 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
MMP3-201ENST00000299855 TYMSOSQ8TAI1 123 aa5.36□□□□□ -1.55
MMP3-201ENST00000299855 Q96NJ1 140 aa5.35□□□□□ -1.55
MMP3-201ENST00000299855 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
MMP3-201ENST00000299855 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.56
MMP3-201ENST00000299855 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
MMP3-201ENST00000299855 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
MMP3-201ENST00000299855 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
MMP3-201ENST00000299855 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
MMP3-201ENST00000299855 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
MMP3-201ENST00000299855 C14orf177Q52M58 125 aa5.32□□□□□ -1.56
MMP3-201ENST00000299855 CSMD3Q7Z407 3707 aa5.32□□□□□ -1.56
MMP3-201ENST00000299855 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
MMP3-201ENST00000299855 ACYP2P14621 99 aa5.3□□□□□ -1.56
MMP3-201ENST00000299855 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
MMP3-201ENST00000299855 SACSQ9NZJ4 4579 aa5.3□□□□□ -1.56
MMP3-201ENST00000299855 ZNF861PO60384 105 aa5.29□□□□□ -1.56
MMP3-201ENST00000299855 KRTAP11-1Q8IUC1 163 aa5.29□□□□□ -1.56
MMP3-201ENST00000299855 LYSTQ99698 3801 aa5.29□□□□□ -1.56
MMP3-201ENST00000299855 DNAH1Q9P2D7 4330 aa5.29□□□□□ -1.56
MMP3-201ENST00000299855 RYR3Q15413 4870 aa5.28□□□□□ -1.56
MMP3-201ENST00000299855 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
MMP3-201ENST00000299855 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
MMP3-201ENST00000299855 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
MMP3-201ENST00000299855 PSORS1C2Q9UIG4 136 aa5.25□□□□□ -1.57
MMP3-201ENST00000299855 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
MMP3-201ENST00000299855 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
MMP3-201ENST00000299855 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
MMP3-201ENST00000299855 RYR2Q92736 4967 aa5.23□□□□□ -1.57
MMP3-201ENST00000299855 A0A087WTM6 91 aa5.22□□□□□ -1.57
MMP3-201ENST00000299855 A0A1B0GU69 56 aa5.21□□□□□ -1.58
MMP3-201ENST00000299855 HYDINQ4G0P3 5121 aa5.21□□□□□ -1.58
MMP3-201ENST00000299855 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
MMP3-201ENST00000299855 KRTAP1-5Q9BYS1 174 aa5.19□□□□□ -1.58
MMP3-201ENST00000299855 R4GN34 69 aa5.19□□□□□ -1.58
MMP3-201ENST00000299855 LY6G6CO95867 125 aa5.18□□□□□ -1.58
MMP3-201ENST00000299855 NBDYA0A0U1RRE5 68 aa5.17□□□□□ -1.58
MMP3-201ENST00000299855 DNAH6Q9C0G6 4158 aa5.16□□□□□ -1.58
MMP3-201ENST00000299855 KMT2AQ03164 3969 aa5.15□□□□□ -1.59
MMP3-201ENST00000299855 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
MMP3-201ENST00000299855 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
MMP3-201ENST00000299855 UBE2DNLQ8IWF7 75 aa5.13□□□□□ -1.59
MMP3-201ENST00000299855 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
MMP3-201ENST00000299855 APLNQ9ULZ1 77 aa5.12□□□□□ -1.59
MMP3-201ENST00000299855 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
MMP3-201ENST00000299855 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
MMP3-201ENST00000299855 EPPK1P58107 5090 aaKnown RBP5.1□□□□□ -1.59
MMP3-201ENST00000299855 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
MMP3-201ENST00000299855 DNAH2Q9P225 4427 aa5.09□□□□□ -1.6
MMP3-201ENST00000299855 SRRM2Q9UQ35 2752 aaKnown RBP5.08□□□□□ -1.6
MMP3-201ENST00000299855 SPINK6Q6UWN8 80 aa5.07□□□□□ -1.6
MMP3-201ENST00000299855 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
MMP3-201ENST00000299855 DNAH17Q9UFH2 4485 aa5.06□□□□□ -1.6
MMP3-201ENST00000299855 FAT2Q9NYQ8 4349 aa5.05□□□□□ -1.6
MMP3-201ENST00000299855 LINC00304Q8N9R0 145 aa5.04□□□□□ -1.6
MMP3-201ENST00000299855 ANAPC11Q9NYG5 84 aa5.04□□□□□ -1.6
MMP3-201ENST00000299855 HECTD4Q9Y4D8 3996 aa5.02□□□□□ -1.61
MMP3-201ENST00000299855 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
MMP3-201ENST00000299855 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
MMP3-201ENST00000299855 PKD1P98161 4303 aa5□□□□□ -1.61
MMP3-201ENST00000299855 DNAH11Q96DT5 4516 aa4.99□□□□□ -1.61
MMP3-201ENST00000299855 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
MMP3-201ENST00000299855 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
MMP3-201ENST00000299855 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms