RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
CCNF-201ENST00000293968 A0A087WTM6 91 aa8.76□□□□□ -1.01
CCNF-201ENST00000293968 ZNF861PO60384 105 aa8.76□□□□□ -1.01
CCNF-201ENST00000293968 CMYA5Q8N3K9 4069 aa8.76□□□□□ -1.01
CCNF-201ENST00000293968 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
CCNF-201ENST00000293968 NUPR2A6NF83 97 aa8.75□□□□□ -1.01
CCNF-201ENST00000293968 Q5W150 140 aa8.75□□□□□ -1.01
CCNF-201ENST00000293968 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
CCNF-201ENST00000293968 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
CCNF-201ENST00000293968 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
CCNF-201ENST00000293968 DNAH9Q9NYC9 4486 aa8.71□□□□□ -1.01
CCNF-201ENST00000293968 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.02
CCNF-201ENST00000293968 ACYP2P14621 99 aa8.69□□□□□ -1.02
CCNF-201ENST00000293968 A6NN06 94 aa8.68□□□□□ -1.02
CCNF-201ENST00000293968 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.02
CCNF-201ENST00000293968 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
CCNF-201ENST00000293968 LINC00313P59037 77 aa8.63□□□□□ -1.03
CCNF-201ENST00000293968 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
CCNF-201ENST00000293968 A0A1B0GU69 56 aa8.62□□□□□ -1.03
CCNF-201ENST00000293968 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
CCNF-201ENST00000293968 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
CCNF-201ENST00000293968 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
CCNF-201ENST00000293968 TGP01266 2768 aa8.61□□□□□ -1.03
CCNF-201ENST00000293968 LY6G6CO95867 125 aa8.58□□□□□ -1.04
CCNF-201ENST00000293968 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
CCNF-201ENST00000293968 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
CCNF-201ENST00000293968 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
CCNF-201ENST00000293968 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
CCNF-201ENST00000293968 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
CCNF-201ENST00000293968 SPINK1P00995 79 aa8.54□□□□□ -1.04
CCNF-201ENST00000293968 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
CCNF-201ENST00000293968 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
CCNF-201ENST00000293968 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
CCNF-201ENST00000293968 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
CCNF-201ENST00000293968 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
CCNF-201ENST00000293968 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
CCNF-201ENST00000293968 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
CCNF-201ENST00000293968 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
CCNF-201ENST00000293968 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
CCNF-201ENST00000293968 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.06
CCNF-201ENST00000293968 UQCR11O14957 56 aa8.43□□□□□ -1.06
CCNF-201ENST00000293968 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
CCNF-201ENST00000293968 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
CCNF-201ENST00000293968 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
CCNF-201ENST00000293968 Q8N1X5 172 aa8.4□□□□□ -1.06
CCNF-201ENST00000293968 STARD9Q9P2P6 4700 aa8.36□□□□□ -1.07
CCNF-201ENST00000293968 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
CCNF-201ENST00000293968 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
CCNF-201ENST00000293968 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
CCNF-201ENST00000293968 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
CCNF-201ENST00000293968 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
CCNF-201ENST00000293968 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
CCNF-201ENST00000293968 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
CCNF-201ENST00000293968 DNAH17Q9UFH2 4485 aa8.28□□□□□ -1.08
CCNF-201ENST00000293968 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
CCNF-201ENST00000293968 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
CCNF-201ENST00000293968 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
CCNF-201ENST00000293968 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
CCNF-201ENST00000293968 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
CCNF-201ENST00000293968 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
CCNF-201ENST00000293968 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
CCNF-201ENST00000293968 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
CCNF-201ENST00000293968 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
CCNF-201ENST00000293968 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
CCNF-201ENST00000293968 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
CCNF-201ENST00000293968 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
CCNF-201ENST00000293968 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.11
CCNF-201ENST00000293968 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
CCNF-201ENST00000293968 Q6ZSA8 131 aa8.09□□□□□ -1.11
CCNF-201ENST00000293968 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
CCNF-201ENST00000293968 A0A1B0GU33 70 aa8.06□□□□□ -1.12
CCNF-201ENST00000293968 H0YAA0 97 aa8.02□□□□□ -1.13
CCNF-201ENST00000293968 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
CCNF-201ENST00000293968 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
CCNF-201ENST00000293968 K7ERS5 55 aa7.96□□□□□ -1.13
CCNF-201ENST00000293968 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
CCNF-201ENST00000293968 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
CCNF-201ENST00000293968 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
CCNF-201ENST00000293968 A8MUU9 505 aa7.92□□□□□ -1.14
CCNF-201ENST00000293968 H3BS24 57 aa7.91□□□□□ -1.14
CCNF-201ENST00000293968 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
CCNF-201ENST00000293968 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
CCNF-201ENST00000293968 A0A0D9SG42 100 aa7.86□□□□□ -1.15
CCNF-201ENST00000293968 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
CCNF-201ENST00000293968 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
CCNF-201ENST00000293968 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
CCNF-201ENST00000293968 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
CCNF-201ENST00000293968 COX6B2Q6YFQ2 88 aa7.82□□□□□ -1.16
CCNF-201ENST00000293968 PKD1P98161 4303 aa7.75□□□□□ -1.17
CCNF-201ENST00000293968 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
CCNF-201ENST00000293968 ROMO1P60602 79 aa7.7□□□□□ -1.18
CCNF-201ENST00000293968 FAT1Q14517 4588 aa7.7□□□□□ -1.18
CCNF-201ENST00000293968 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
CCNF-201ENST00000293968 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
CCNF-201ENST00000293968 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.19
CCNF-201ENST00000293968 S4R3F8 94 aa7.61□□□□□ -1.19
CCNF-201ENST00000293968 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
CCNF-201ENST00000293968 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
CCNF-201ENST00000293968 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
CCNF-201ENST00000293968 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms