RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PKD1L1Q8TDX9 2849 aa7.77□□□□□ -1.16
SLC6A1-201ENST00000287766 HRES1P13985 223 aa7.77□□□□□ -1.17
SLC6A1-201ENST00000287766 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
SLC6A1-201ENST00000287766 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
SLC6A1-201ENST00000287766 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
SLC6A1-201ENST00000287766 A0A1B0GU33 70 aa7.7□□□□□ -1.18
SLC6A1-201ENST00000287766 KRTAP4-16G5E9R7 235 aaPredicted RBP7.7□□□□□ -1.18
SLC6A1-201ENST00000287766 PANO1I0J062 215 aa7.69□□□□□ -1.18
SLC6A1-201ENST00000287766 KRTAP7-1Q8IUC3 87 aa7.68□□□□□ -1.18
SLC6A1-201ENST00000287766 TNP2Q05952 138 aa7.68□□□□□ -1.18
SLC6A1-201ENST00000287766 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.19
SLC6A1-201ENST00000287766 LUZP6Q538Z0 58 aa7.64□□□□□ -1.19
SLC6A1-201ENST00000287766 IGLV7-43P04211 117 aa7.64□□□□□ -1.19
SLC6A1-201ENST00000287766 A8MU10 97 aa7.63□□□□□ -1.19
SLC6A1-201ENST00000287766 LINC00304Q8N9R0 145 aa7.62□□□□□ -1.19
SLC6A1-201ENST00000287766 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
SLC6A1-201ENST00000287766 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
SLC6A1-201ENST00000287766 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
SLC6A1-201ENST00000287766 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
SLC6A1-201ENST00000287766 WWC2-AS2Q96NR7 200 aa7.55□□□□□ -1.2
SLC6A1-201ENST00000287766 ZCCHC13Q8WW36 166 aaKnown RBP7.55□□□□□ -1.2
SLC6A1-201ENST00000287766 SPRR1BP22528 89 aa7.54□□□□□ -1.2
SLC6A1-201ENST00000287766 Q5W150 140 aa7.54□□□□□ -1.2
SLC6A1-201ENST00000287766 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
SLC6A1-201ENST00000287766 A6NN06 94 aa7.49□□□□□ -1.21
SLC6A1-201ENST00000287766 TGP01266 2768 aa7.49□□□□□ -1.21
SLC6A1-201ENST00000287766 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
SLC6A1-201ENST00000287766 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
SLC6A1-201ENST00000287766 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
SLC6A1-201ENST00000287766 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
SLC6A1-201ENST00000287766 A0A087X002 238 aa7.46□□□□□ -1.22
SLC6A1-201ENST00000287766 NOTCH2NLQ7Z3S9 236 aa7.46□□□□□ -1.22
SLC6A1-201ENST00000287766 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
SLC6A1-201ENST00000287766 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.22
SLC6A1-201ENST00000287766 A0A0A0MQY5 61 aa7.4□□□□□ -1.22
SLC6A1-201ENST00000287766 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.23
SLC6A1-201ENST00000287766 Q6ZRN7 208 aaPredicted RBP7.39□□□□□ -1.23
SLC6A1-201ENST00000287766 ANK3Q12955 4377 aaKnown RBP7.38□□□□□ -1.23
SLC6A1-201ENST00000287766 Q6ZR54 194 aa7.37□□□□□ -1.23
SLC6A1-201ENST00000287766 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
SLC6A1-201ENST00000287766 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
SLC6A1-201ENST00000287766 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
SLC6A1-201ENST00000287766 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
SLC6A1-201ENST00000287766 ROMO1P60602 79 aa7.35□□□□□ -1.23
SLC6A1-201ENST00000287766 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
SLC6A1-201ENST00000287766 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
SLC6A1-201ENST00000287766 LCE6AA0A183 80 aa7.33□□□□□ -1.24
SLC6A1-201ENST00000287766 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
SLC6A1-201ENST00000287766 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
SLC6A1-201ENST00000287766 H1FX-AS1Q4G0G2 97 aa7.29□□□□□ -1.24
SLC6A1-201ENST00000287766 NDUFAF8A1L188 74 aa7.26□□□□□ -1.25
SLC6A1-201ENST00000287766 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
SLC6A1-201ENST00000287766 Q6ZSA8 131 aa7.21□□□□□ -1.26
SLC6A1-201ENST00000287766 FBN3Q75N90 2809 aa7.21□□□□□ -1.26
SLC6A1-201ENST00000287766 S4R3F8 94 aa7.2□□□□□ -1.26
SLC6A1-201ENST00000287766 R4GN34 69 aa7.19□□□□□ -1.26
SLC6A1-201ENST00000287766 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
SLC6A1-201ENST00000287766 J3QL48 77 aa7.16□□□□□ -1.26
SLC6A1-201ENST00000287766 COL7A1Q02388 2944 aa7.15□□□□□ -1.26
SLC6A1-201ENST00000287766 CSMD3Q7Z407 3707 aa7.14□□□□□ -1.27
SLC6A1-201ENST00000287766 AKAP9Q99996 3911 aa7.13□□□□□ -1.27
SLC6A1-201ENST00000287766 M0QZ58 72 aa7.08□□□□□ -1.28
SLC6A1-201ENST00000287766 A8MUU9 505 aa7.06□□□□□ -1.28
SLC6A1-201ENST00000287766 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
SLC6A1-201ENST00000287766 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
SLC6A1-201ENST00000287766 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
SLC6A1-201ENST00000287766 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
SLC6A1-201ENST00000287766 Q5VSD8 79 aa6.91□□□□□ -1.3
SLC6A1-201ENST00000287766 M0R2T5 61 aa6.89□□□□□ -1.31
SLC6A1-201ENST00000287766 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
SLC6A1-201ENST00000287766 H0YAA0 97 aa6.8□□□□□ -1.32
SLC6A1-201ENST00000287766 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
SLC6A1-201ENST00000287766 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
SLC6A1-201ENST00000287766 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
SLC6A1-201ENST00000287766 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
SLC6A1-201ENST00000287766 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
SLC6A1-201ENST00000287766 P0C880 135 aa6.65□□□□□ -1.35
SLC6A1-201ENST00000287766 KRTAP10-8P60410 259 aa6.59□□□□□ -1.35
SLC6A1-201ENST00000287766 PLECQ15149 4684 aaKnown RBP6.55□□□□□ -1.36
SLC6A1-201ENST00000287766 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
SLC6A1-201ENST00000287766 TNP1P09430 55 aa6.54□□□□□ -1.36
SLC6A1-201ENST00000287766 XP32Q5T750 250 aa6.52□□□□□ -1.37
SLC6A1-201ENST00000287766 ANK2Q01484 3957 aa6.5□□□□□ -1.37
SLC6A1-201ENST00000287766 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
SLC6A1-201ENST00000287766 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
SLC6A1-201ENST00000287766 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
SLC6A1-201ENST00000287766 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
SLC6A1-201ENST00000287766 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
SLC6A1-201ENST00000287766 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
SLC6A1-201ENST00000287766 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
SLC6A1-201ENST00000287766 DNHD1Q96M86 4753 aa6.37□□□□□ -1.39
SLC6A1-201ENST00000287766 LYSTQ99698 3801 aa6.37□□□□□ -1.39
SLC6A1-201ENST00000287766 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
SLC6A1-201ENST00000287766 PRKDCP78527 4128 aaKnown RBP6.3□□□□□ -1.4
SLC6A1-201ENST00000287766 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
SLC6A1-201ENST00000287766 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
SLC6A1-201ENST00000287766 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
SLC6A1-201ENST00000287766 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
SLC6A1-201ENST00000287766 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
SLC6A1-201ENST00000287766 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms