RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ACYP2P14621 99 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
SCAF4-201ENST00000286835 ZNF861PO60384 105 aa8.06□□□□□ -1.12
SCAF4-201ENST00000286835 A0A1B0GU69 56 aa8.05□□□□□ -1.12
SCAF4-201ENST00000286835 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
SCAF4-201ENST00000286835 LINC00313P59037 77 aa8.02□□□□□ -1.13
SCAF4-201ENST00000286835 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
SCAF4-201ENST00000286835 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
SCAF4-201ENST00000286835 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
SCAF4-201ENST00000286835 Q96NJ1 140 aa7.99□□□□□ -1.13
SCAF4-201ENST00000286835 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
SCAF4-201ENST00000286835 Q5W150 140 aa7.98□□□□□ -1.13
SCAF4-201ENST00000286835 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
SCAF4-201ENST00000286835 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
SCAF4-201ENST00000286835 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
SCAF4-201ENST00000286835 Q6ZR54 194 aa7.96□□□□□ -1.14
SCAF4-201ENST00000286835 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
SCAF4-201ENST00000286835 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
SCAF4-201ENST00000286835 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-201ENST00000286835 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
SCAF4-201ENST00000286835 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
SCAF4-201ENST00000286835 LINC00483Q53H64 154 aa7.88□□□□□ -1.15
SCAF4-201ENST00000286835 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
SCAF4-201ENST00000286835 A6NN06 94 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
SCAF4-201ENST00000286835 UQCR11O14957 56 aa7.85□□□□□ -1.15
SCAF4-201ENST00000286835 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
SCAF4-201ENST00000286835 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
SCAF4-201ENST00000286835 Q8N1X5 172 aa7.83□□□□□ -1.16
SCAF4-201ENST00000286835 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
SCAF4-201ENST00000286835 ANK2Q01484 3957 aa7.81□□□□□ -1.16
SCAF4-201ENST00000286835 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
SCAF4-201ENST00000286835 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
SCAF4-201ENST00000286835 ASB16-AS1Q495Z4 193 aa7.78□□□□□ -1.16
SCAF4-201ENST00000286835 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
SCAF4-201ENST00000286835 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
SCAF4-201ENST00000286835 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
SCAF4-201ENST00000286835 KRTAP21-3Q3LHN1 58 aa7.72□□□□□ -1.17
SCAF4-201ENST00000286835 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
SCAF4-201ENST00000286835 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
SCAF4-201ENST00000286835 LYSTQ99698 3801 aa7.65□□□□□ -1.18
SCAF4-201ENST00000286835 J3QL48 77 aa7.65□□□□□ -1.19
SCAF4-201ENST00000286835 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
SCAF4-201ENST00000286835 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
SCAF4-201ENST00000286835 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
SCAF4-201ENST00000286835 K7ERS5 55 aa7.59□□□□□ -1.19
SCAF4-201ENST00000286835 SPATA8Q6RVD6 105 aa7.59□□□□□ -1.19
SCAF4-201ENST00000286835 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
SCAF4-201ENST00000286835 Q5VSD8 79 aa7.54□□□□□ -1.2
SCAF4-201ENST00000286835 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
SCAF4-201ENST00000286835 DNAH9Q9NYC9 4486 aa7.52□□□□□ -1.21
SCAF4-201ENST00000286835 A0A1B0GU33 70 aa7.49□□□□□ -1.21
SCAF4-201ENST00000286835 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.21
SCAF4-201ENST00000286835 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
SCAF4-201ENST00000286835 A0A0D9SG42 100 aa7.42□□□□□ -1.22
SCAF4-201ENST00000286835 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
SCAF4-201ENST00000286835 H3BS24 57 aa7.4□□□□□ -1.22
SCAF4-201ENST00000286835 DNAH7Q8WXX0 4024 aa7.39□□□□□ -1.23
SCAF4-201ENST00000286835 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
SCAF4-201ENST00000286835 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
SCAF4-201ENST00000286835 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
SCAF4-201ENST00000286835 Q6ZSA8 131 aa7.35□□□□□ -1.23
SCAF4-201ENST00000286835 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
SCAF4-201ENST00000286835 H0YAA0 97 aa7.3□□□□□ -1.24
SCAF4-201ENST00000286835 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
SCAF4-201ENST00000286835 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
SCAF4-201ENST00000286835 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
SCAF4-201ENST00000286835 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
SCAF4-201ENST00000286835 KMT2AQ03164 3969 aa7.27□□□□□ -1.25
SCAF4-201ENST00000286835 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
SCAF4-201ENST00000286835 DNAH11Q96DT5 4516 aa7.22□□□□□ -1.25
SCAF4-201ENST00000286835 A8MUU9 505 aa7.2□□□□□ -1.26
SCAF4-201ENST00000286835 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
SCAF4-201ENST00000286835 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
SCAF4-201ENST00000286835 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
SCAF4-201ENST00000286835 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
SCAF4-201ENST00000286835 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
SCAF4-201ENST00000286835 HECTD4Q9Y4D8 3996 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 ROMO1P60602 79 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
SCAF4-201ENST00000286835 RPS29P62273 56 aaKnown RBP7.09□□□□□ -1.27
SCAF4-201ENST00000286835 DNAH6Q9C0G6 4158 aa7.09□□□□□ -1.27
SCAF4-201ENST00000286835 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
SCAF4-201ENST00000286835 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
SCAF4-201ENST00000286835 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
SCAF4-201ENST00000286835 S4R3F8 94 aa7.07□□□□□ -1.28
SCAF4-201ENST00000286835 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
SCAF4-201ENST00000286835 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
SCAF4-201ENST00000286835 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
SCAF4-201ENST00000286835 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
SCAF4-201ENST00000286835 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
SCAF4-201ENST00000286835 M0R2T5 61 aa6.93□□□□□ -1.3
SCAF4-201ENST00000286835 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
SCAF4-201ENST00000286835 P0C880 135 aa6.91□□□□□ -1.3
SCAF4-201ENST00000286835 FAT1Q14517 4588 aa6.87□□□□□ -1.31
SCAF4-201ENST00000286835 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms