RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 Q6ZR54 194 aa7.71□□□□□ -1.18
COL8A1-202ENST00000273342 APLNQ9ULZ1 77 aa7.71□□□□□ -1.18
COL8A1-202ENST00000273342 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
COL8A1-202ENST00000273342 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
COL8A1-202ENST00000273342 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
COL8A1-202ENST00000273342 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
COL8A1-202ENST00000273342 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
COL8A1-202ENST00000273342 PLECQ15149 4684 aaKnown RBP7.65□□□□□ -1.18
COL8A1-202ENST00000273342 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.19
COL8A1-202ENST00000273342 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
COL8A1-202ENST00000273342 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
COL8A1-202ENST00000273342 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
COL8A1-202ENST00000273342 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
COL8A1-202ENST00000273342 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
COL8A1-202ENST00000273342 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
COL8A1-202ENST00000273342 LINC00483Q53H64 154 aa7.6□□□□□ -1.19
COL8A1-202ENST00000273342 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.19
COL8A1-202ENST00000273342 MEGF8Q7Z7M0 2845 aa7.58□□□□□ -1.2
COL8A1-202ENST00000273342 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
COL8A1-202ENST00000273342 ZNF706Q9Y5V0 76 aaPredicted RBP7.58□□□□□ -1.2
COL8A1-202ENST00000273342 RTL8CO15255 209 aa7.57□□□□□ -1.2
COL8A1-202ENST00000273342 ZNF861PO60384 105 aa7.57□□□□□ -1.2
COL8A1-202ENST00000273342 A0A087WTM6 91 aa7.56□□□□□ -1.2
COL8A1-202ENST00000273342 ACYP2P14621 99 aa7.56□□□□□ -1.2
COL8A1-202ENST00000273342 LINC00313P59037 77 aa7.55□□□□□ -1.2
COL8A1-202ENST00000273342 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
COL8A1-202ENST00000273342 LY6G6CO95867 125 aa7.53□□□□□ -1.2
COL8A1-202ENST00000273342 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
COL8A1-202ENST00000273342 A0A1B0GU69 56 aa7.52□□□□□ -1.21
COL8A1-202ENST00000273342 STARD9Q9P2P6 4700 aa7.52□□□□□ -1.21
COL8A1-202ENST00000273342 KRTAP13-3Q3SY46 172 aa7.51□□□□□ -1.21
COL8A1-202ENST00000273342 NUPR2A6NF83 97 aa7.49□□□□□ -1.21
COL8A1-202ENST00000273342 IGKV2D-30A0A075B6S6 120 aa7.48□□□□□ -1.21
COL8A1-202ENST00000273342 IGKV2-30P06310 120 aa7.48□□□□□ -1.21
COL8A1-202ENST00000273342 PRKDCP78527 4128 aaKnown RBP7.48□□□□□ -1.21
COL8A1-202ENST00000273342 DNAH17Q9UFH2 4485 aa7.48□□□□□ -1.21
COL8A1-202ENST00000273342 HECTD4Q9Y4D8 3996 aa7.47□□□□□ -1.21
COL8A1-202ENST00000273342 IGLV7-43P04211 117 aa7.46□□□□□ -1.22
COL8A1-202ENST00000273342 SPINK1P00995 79 aa7.45□□□□□ -1.22
COL8A1-202ENST00000273342 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
COL8A1-202ENST00000273342 DNAH2Q9P225 4427 aa7.42□□□□□ -1.22
COL8A1-202ENST00000273342 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
COL8A1-202ENST00000273342 MIR22HGQ0VDD5 57 aa7.41□□□□□ -1.22
COL8A1-202ENST00000273342 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
COL8A1-202ENST00000273342 C1orf134Q5TEV5 83 aa7.39□□□□□ -1.23
COL8A1-202ENST00000273342 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
COL8A1-202ENST00000273342 DNHD1Q96M86 4753 aa7.37□□□□□ -1.23
COL8A1-202ENST00000273342 ALMS1Q8TCU4 4167 aa7.37□□□□□ -1.23
COL8A1-202ENST00000273342 VPS13DQ5THJ4 4388 aa7.36□□□□□ -1.23
COL8A1-202ENST00000273342 UQCR11O14957 56 aa7.36□□□□□ -1.23
COL8A1-202ENST00000273342 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
COL8A1-202ENST00000273342 DYNC2H1Q8NCM8 4307 aaKnown RBP7.35□□□□□ -1.23
COL8A1-202ENST00000273342 Q8N1X5 172 aa7.35□□□□□ -1.23
COL8A1-202ENST00000273342 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
COL8A1-202ENST00000273342 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
COL8A1-202ENST00000273342 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
COL8A1-202ENST00000273342 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
COL8A1-202ENST00000273342 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
COL8A1-202ENST00000273342 CSAG1Q6PB30 78 aa7.3□□□□□ -1.24
COL8A1-202ENST00000273342 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
COL8A1-202ENST00000273342 FLG2Q5D862 2391 aaPredicted RBP7.28□□□□□ -1.24
COL8A1-202ENST00000273342 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
COL8A1-202ENST00000273342 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
COL8A1-202ENST00000273342 KRTAP10-1P60331 282 aa7.21□□□□□ -1.26
COL8A1-202ENST00000273342 DNAH5Q8TE73 4624 aa7.19□□□□□ -1.26
COL8A1-202ENST00000273342 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
COL8A1-202ENST00000273342 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
COL8A1-202ENST00000273342 HYDINQ4G0P3 5121 aa7.16□□□□□ -1.26
COL8A1-202ENST00000273342 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
COL8A1-202ENST00000273342 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
COL8A1-202ENST00000273342 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
COL8A1-202ENST00000273342 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
COL8A1-202ENST00000273342 Q6ZSA8 131 aa7.12□□□□□ -1.27
COL8A1-202ENST00000273342 H0YAA0 97 aa7.1□□□□□ -1.27
COL8A1-202ENST00000273342 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
COL8A1-202ENST00000273342 H3BS24 57 aa7.09□□□□□ -1.27
COL8A1-202ENST00000273342 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
COL8A1-202ENST00000273342 PKHD1P08F94 4074 aa7.03□□□□□ -1.28
COL8A1-202ENST00000273342 A0A1B0GU33 70 aa7.03□□□□□ -1.28
COL8A1-202ENST00000273342 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
COL8A1-202ENST00000273342 A8MUU9 505 aa7.01□□□□□ -1.29
COL8A1-202ENST00000273342 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
COL8A1-202ENST00000273342 PKD1P98161 4303 aa6.98□□□□□ -1.29
COL8A1-202ENST00000273342 FAT1Q14517 4588 aa6.97□□□□□ -1.29
COL8A1-202ENST00000273342 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
COL8A1-202ENST00000273342 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
COL8A1-202ENST00000273342 A0A0D9SG42 100 aa6.87□□□□□ -1.31
COL8A1-202ENST00000273342 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
COL8A1-202ENST00000273342 ROMO1P60602 79 aa6.85□□□□□ -1.31
COL8A1-202ENST00000273342 K7ERS5 55 aa6.83□□□□□ -1.32
COL8A1-202ENST00000273342 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
COL8A1-202ENST00000273342 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
COL8A1-202ENST00000273342 DYNC1H1Q14204 4646 aaKnown RBP6.76□□□□□ -1.33
COL8A1-202ENST00000273342 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
COL8A1-202ENST00000273342 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
COL8A1-202ENST00000273342 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
COL8A1-202ENST00000273342 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
COL8A1-202ENST00000273342 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
COL8A1-202ENST00000273342 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
COL8A1-202ENST00000273342 P0C880 135 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms