RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
TPM3-201ENST00000271850 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
TPM3-201ENST00000271850 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 H0YGX0 51 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 S100A2P29034 98 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
TPM3-201ENST00000271850 A0A1B0GV72 72 aa4.35□□□□□ -1.71
TPM3-201ENST00000271850 IGKV4-1P06312 121 aa4.35□□□□□ -1.71
TPM3-201ENST00000271850 RAB37Q96AX2 223 aa4.35□□□□□ -1.71
TPM3-201ENST00000271850 HIGD1BQ9P298 99 aa4.35□□□□□ -1.71
TPM3-201ENST00000271850 A0A1B0GX51 115 aa4.34□□□□□ -1.71
TPM3-201ENST00000271850 TRIAP1O43715 76 aa4.34□□□□□ -1.71
TPM3-201ENST00000271850 FABP2P12104 132 aa4.34□□□□□ -1.71
TPM3-201ENST00000271850 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
TPM3-201ENST00000271850 PCP4P48539 62 aa4.33□□□□□ -1.72
TPM3-201ENST00000271850 FXYD2P54710 66 aa4.33□□□□□ -1.72
TPM3-201ENST00000271850 CEND1Q8N111 149 aa4.32□□□□□ -1.72
TPM3-201ENST00000271850 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
TPM3-201ENST00000271850 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
TPM3-201ENST00000271850 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
TPM3-201ENST00000271850 SPATA45Q537H7 98 aa4.3□□□□□ -1.72
TPM3-201ENST00000271850 ANKRD29Q8N6D5 301 aa4.3□□□□□ -1.72
TPM3-201ENST00000271850 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
TPM3-201ENST00000271850 K7ERJ3 54 aa4.29□□□□□ -1.72
TPM3-201ENST00000271850 CCKP06307 115 aa4.28□□□□□ -1.72
TPM3-201ENST00000271850 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
TPM3-201ENST00000271850 S100A6P06703 90 aa4.28□□□□□ -1.72
TPM3-201ENST00000271850 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
TPM3-201ENST00000271850 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
TPM3-201ENST00000271850 SNCGO76070 127 aa4.27□□□□□ -1.73
TPM3-201ENST00000271850 SPINK7P58062 85 aa4.27□□□□□ -1.73
TPM3-201ENST00000271850 ORMDL1Q9P0S3 153 aa4.27□□□□□ -1.73
TPM3-201ENST00000271850 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
TPM3-201ENST00000271850 TRACP01848 142 aa4.25□□□□□ -1.73
TPM3-201ENST00000271850 VAMP8Q9BV40 100 aa4.24□□□□□ -1.73
TPM3-201ENST00000271850 TMEM256-PLSCR3K7ERE1 68 aa4.23□□□□□ -1.73
TPM3-201ENST00000271850 DNAL4O96015 105 aa4.23□□□□□ -1.73
TPM3-201ENST00000271850 UBE2V1Q13404 147 aa4.23□□□□□ -1.73
TPM3-201ENST00000271850 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
TPM3-201ENST00000271850 A8MWP4 228 aa4.22□□□□□ -1.73
TPM3-201ENST00000271850 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
TPM3-201ENST00000271850 VPS25Q9BRG1 176 aa4.21□□□□□ -1.74
TPM3-201ENST00000271850 H3BQ85 93 aa4.2□□□□□ -1.74
TPM3-201ENST00000271850 MTURNQ8N3F0 131 aa4.2□□□□□ -1.74
TPM3-201ENST00000271850 PSMB2P49721 201 aa4.19□□□□□ -1.74
TPM3-201ENST00000271850 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
TPM3-201ENST00000271850 HSD52Q0P140 79 aa4.19□□□□□ -1.74
TPM3-201ENST00000271850 PYY3Q5JQD4 70 aa4.19□□□□□ -1.74
TPM3-201ENST00000271850 Q6ZQT0 140 aa4.19□□□□□ -1.74
TPM3-201ENST00000271850 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
TPM3-201ENST00000271850 S100A1P23297 94 aa4.18□□□□□ -1.74
TPM3-201ENST00000271850 C8orf17Q9NRJ1 99 aa4.18□□□□□ -1.74
TPM3-201ENST00000271850 LINC00846Q9NV44 126 aa4.17□□□□□ -1.74
TPM3-201ENST00000271850 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
TPM3-201ENST00000271850 J3KT08 172 aa4.16□□□□□ -1.74
TPM3-201ENST00000271850 NEBP20929 6669 aa4.15□□□□□ -1.74
TPM3-201ENST00000271850 COX6CP09669 75 aa4.15□□□□□ -1.75
TPM3-201ENST00000271850 DSCR8Q96T75 97 aa4.15□□□□□ -1.75
TPM3-201ENST00000271850 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
TPM3-201ENST00000271850 C9JAW5 83 aa4.13□□□□□ -1.75
TPM3-201ENST00000271850 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
TPM3-201ENST00000271850 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
TPM3-201ENST00000271850 Q6ZVQ6 151 aa4.13□□□□□ -1.75
TPM3-201ENST00000271850 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
TPM3-201ENST00000271850 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
TPM3-201ENST00000271850 MT1BP07438 61 aa4.11□□□□□ -1.75
TPM3-201ENST00000271850 PRR15Q8IV56 129 aa4.11□□□□□ -1.75
TPM3-201ENST00000271850 LOC110117498A0A087WWA1 95 aa4.1□□□□□ -1.75
TPM3-201ENST00000271850 NDUFB1O75438 58 aa4.1□□□□□ -1.75
TPM3-201ENST00000271850 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
TPM3-201ENST00000271850 Q5W150 140 aa4.09□□□□□ -1.75
TPM3-201ENST00000271850 NAA38Q9BRA0 125 aaKnown RBP4.09□□□□□ -1.75
TPM3-201ENST00000271850 UQCR10Q9UDW1 63 aa4.09□□□□□ -1.75
TPM3-201ENST00000271850 LYRM7Q5U5X0 104 aa4.08□□□□□ -1.76
TPM3-201ENST00000271850 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
TPM3-201ENST00000271850 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
TPM3-201ENST00000271850 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
TPM3-201ENST00000271850 K7EQZ3 153 aa4.07□□□□□ -1.76
TPM3-201ENST00000271850 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
TPM3-201ENST00000271850 A0A1B0GW54 56 aa4.05□□□□□ -1.76
TPM3-201ENST00000271850 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
TPM3-201ENST00000271850 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
TPM3-201ENST00000271850 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
TPM3-201ENST00000271850 ATXN8Q156A1 80 aa4.03□□□□□ -1.76
TPM3-201ENST00000271850 KMT2DO14686 5537 aa4.03□□□□□ -1.76
TPM3-201ENST00000271850 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
TPM3-201ENST00000271850 A6NN06 94 aa4.02□□□□□ -1.77
TPM3-201ENST00000271850 NREPQ16612 68 aa4.02□□□□□ -1.77
TPM3-201ENST00000271850 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
TPM3-201ENST00000271850 PDE6GP18545 87 aa4.01□□□□□ -1.77
TPM3-201ENST00000271850 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
TPM3-201ENST00000271850 C4orf26Q17RF5 130 aa4.01□□□□□ -1.77
TPM3-201ENST00000271850 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
TPM3-201ENST00000271850 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
TPM3-201ENST00000271850 NDUFS5O43920 106 aa4□□□□□ -1.77
TPM3-201ENST00000271850 KRTAP10-5P60370 271 aa4□□□□□ -1.77
TPM3-201ENST00000271850 C5orf47Q569G3 176 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms