RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NDUFB1O75438 58 aa16.57■□□□□ 0.24
SMARCD3-201ENST00000262188 LIMD2Q9BT23 127 aa16.57■□□□□ 0.24
SMARCD3-201ENST00000262188 A0A1B0GW54 56 aa16.56■□□□□ 0.24
SMARCD3-201ENST00000262188 DEFB105AQ8NG35 78 aa16.55■□□□□ 0.24
SMARCD3-201ENST00000262188 Q5VV11 94 aa16.54■□□□□ 0.24
SMARCD3-201ENST00000262188 ANAPC11Q9NYG5 84 aa16.53■□□□□ 0.24
SMARCD3-201ENST00000262188 PKHD1L1Q86WI1 4243 aa16.51■□□□□ 0.23
SMARCD3-201ENST00000262188 A8MUN3 132 aa16.51■□□□□ 0.23
SMARCD3-201ENST00000262188 SPINK6Q6UWN8 80 aa16.49■□□□□ 0.23
SMARCD3-201ENST00000262188 SPRR4Q96PI1 79 aa16.47■□□□□ 0.23
SMARCD3-201ENST00000262188 A6NN06 94 aa16.43■□□□□ 0.22
SMARCD3-201ENST00000262188 Q8N377 158 aa16.43■□□□□ 0.22
SMARCD3-201ENST00000262188 KRTAP1-4P0C5Y4 121 aa16.41■□□□□ 0.22
SMARCD3-201ENST00000262188 IGLV5-48A0A075B6I7 105 aa16.39■□□□□ 0.21
SMARCD3-201ENST00000262188 C7orf65Q6ZTY9 151 aa16.39■□□□□ 0.21
SMARCD3-201ENST00000262188 Q8N9L7 120 aa16.39■□□□□ 0.21
SMARCD3-201ENST00000262188 CHKB-CPT1BH3BT56 60 aa16.38■□□□□ 0.21
SMARCD3-201ENST00000262188 ABCA13Q86UQ4 5058 aa16.37■□□□□ 0.21
SMARCD3-201ENST00000262188 Q75L30 129 aa16.37■□□□□ 0.21
SMARCD3-201ENST00000262188 SMIM29Q86T20 159 aa16.37■□□□□ 0.21
SMARCD3-201ENST00000262188 ZNF706Q9Y5V0 76 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-201ENST00000262188 FLG2Q5D862 2391 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-201ENST00000262188 LRP1Q07954 4544 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-201ENST00000262188 HCG22E2RYF7 251 aa16.35■□□□□ 0.21
SMARCD3-201ENST00000262188 SPANXA2-OT1Q8N9U9 137 aa16.34■□□□□ 0.21
SMARCD3-201ENST00000262188 LINC00483Q53H64 154 aa16.33■□□□□ 0.21
SMARCD3-201ENST00000262188 LCA10Q71F78 164 aa16.33■□□□□ 0.21
SMARCD3-201ENST00000262188 A0A087X002 238 aa16.33■□□□□ 0.2
SMARCD3-201ENST00000262188 Q8N9P0 234 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-201ENST00000262188 SPRR1BP22528 89 aa16.31■□□□□ 0.2
SMARCD3-201ENST00000262188 MYCBP2O75592 4640 aa16.31■□□□□ 0.2
SMARCD3-201ENST00000262188 LOC101927531A0A1B0GV80 90 aa16.3■□□□□ 0.2
SMARCD3-201ENST00000262188 IGLV9-49A0A0B4J1Y8 123 aa16.28■□□□□ 0.2
SMARCD3-201ENST00000262188 CDC42SE1Q9NRR8 79 aa16.27■□□□□ 0.2
SMARCD3-201ENST00000262188 PRR26Q8N8Z3 221 aa16.26■□□□□ 0.19
SMARCD3-201ENST00000262188 FAT3Q8TDW7 4589 aa16.25■□□□□ 0.19
SMARCD3-201ENST00000262188 KRTAP13-2Q52LG2 175 aa16.25■□□□□ 0.19
SMARCD3-201ENST00000262188 SPTSSBQ8NFR3 76 aa16.24■□□□□ 0.19
SMARCD3-201ENST00000262188 A8MU10 97 aa16.23■□□□□ 0.19
SMARCD3-201ENST00000262188 C8orf87E5RJ46 101 aa16.23■□□□□ 0.19
SMARCD3-201ENST00000262188 A0A0G2JQZ4 141 aa16.22■□□□□ 0.19
SMARCD3-201ENST00000262188 H3BPC8 53 aa16.22■□□□□ 0.19
SMARCD3-201ENST00000262188 LINC00208Q96KT6 92 aa16.21■□□□□ 0.19
SMARCD3-201ENST00000262188 MOBPQ13875 183 aa16.2■□□□□ 0.18
SMARCD3-201ENST00000262188 PRR15LQ9BU68 103 aa16.2■□□□□ 0.18
SMARCD3-201ENST00000262188 MP68P56378 58 aa16.17■□□□□ 0.18
SMARCD3-201ENST00000262188 A6NED7 52 aa16.15■□□□□ 0.18
SMARCD3-201ENST00000262188 TNXBP22105 4242 aa16.1■□□□□ 0.17
SMARCD3-201ENST00000262188 TYMSOSQ8TAI1 123 aa16.09■□□□□ 0.17
SMARCD3-201ENST00000262188 Q8NBF4 154 aa16.07■□□□□ 0.16
SMARCD3-201ENST00000262188 PCLOQ9Y6V0 5065 aa16.05■□□□□ 0.16
SMARCD3-201ENST00000262188 IGFL1Q6UW32 110 aa16.05■□□□□ 0.16
SMARCD3-201ENST00000262188 PRR4Q16378 134 aa16.04■□□□□ 0.16
SMARCD3-201ENST00000262188 IGLV8-61A0A075B6I0 122 aa16.03■□□□□ 0.16
SMARCD3-201ENST00000262188 MT1HL1P0DM35 61 aa16.01■□□□□ 0.15
SMARCD3-201ENST00000262188 KRTAP10-8P60410 259 aa16.01■□□□□ 0.15
SMARCD3-201ENST00000262188 DSCR10P59022 87 aa16■□□□□ 0.15
SMARCD3-201ENST00000262188 SSBP3-AS1Q7Z2R9 100 aa15.97■□□□□ 0.15
SMARCD3-201ENST00000262188 ASB16-AS1Q495Z4 193 aa15.96■□□□□ 0.15
SMARCD3-201ENST00000262188 H3BS24 57 aa15.95■□□□□ 0.14
SMARCD3-201ENST00000262188 LINC01558Q9Y6Z2 57 aa15.95■□□□□ 0.14
SMARCD3-201ENST00000262188 A0A1W2PNM2 257 aa15.91■□□□□ 0.14
SMARCD3-201ENST00000262188 KRTAP29-1A8MX34 341 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-201ENST00000262188 K7EQZ3 153 aa15.91■□□□□ 0.14
SMARCD3-201ENST00000262188 LINC00304Q8N9R0 145 aa15.89■□□□□ 0.13
SMARCD3-201ENST00000262188 COA5Q86WW8 74 aa15.84■□□□□ 0.13
SMARCD3-201ENST00000262188 CASC2Q6XLA1 102 aa15.83■□□□□ 0.12
SMARCD3-201ENST00000262188 DMBT1Q9UGM3 2413 aaPredicted RBP15.82■□□□□ 0.12
SMARCD3-201ENST00000262188 IGLV7-46A0A075B6I9 117 aa15.8■□□□□ 0.12
SMARCD3-201ENST00000262188 J3QL48 77 aa15.8■□□□□ 0.12
SMARCD3-201ENST00000262188 H0Y9P7 68 aa15.79■□□□□ 0.12
SMARCD3-201ENST00000262188 LINC01554Q52M75 96 aa15.79■□□□□ 0.12
SMARCD3-201ENST00000262188 A0A087WSZ3 146 aa15.75■□□□□ 0.11
SMARCD3-201ENST00000262188 SPINK1P00995 79 aa15.72■□□□□ 0.11
SMARCD3-201ENST00000262188 LINC00313P59037 77 aa15.71■□□□□ 0.11
SMARCD3-201ENST00000262188 SPAG11AQ6PDA7 123 aa15.71■□□□□ 0.11
SMARCD3-201ENST00000262188 RETNLBQ9BQ08 111 aa15.65■□□□□ 0.1
SMARCD3-201ENST00000262188 WFDC13Q8IUB5 93 aa15.6■□□□□ 0.09
SMARCD3-201ENST00000262188 RPS29P62273 56 aaKnown RBP15.57■□□□□ 0.08
SMARCD3-201ENST00000262188 DEFB116Q30KQ4 102 aa15.56■□□□□ 0.08
SMARCD3-201ENST00000262188 SPINK7P58062 85 aa15.56■□□□□ 0.08
SMARCD3-201ENST00000262188 HERC1Q15751 4861 aa15.54■□□□□ 0.08
SMARCD3-201ENST00000262188 Q96NJ1 140 aa15.51■□□□□ 0.07
SMARCD3-201ENST00000262188 LINC00472Q9H8W2 130 aa15.46■□□□□ 0.07
SMARCD3-201ENST00000262188 PRAC1Q96KF2 57 aa15.43■□□□□ 0.06
SMARCD3-201ENST00000262188 TP53AIP1Q9HCN2 124 aa15.41■□□□□ 0.06
SMARCD3-201ENST00000262188 A8MWP4 228 aa15.39■□□□□ 0.05
SMARCD3-201ENST00000262188 HRES1P13985 223 aa15.29■□□□□ 0.04
SMARCD3-201ENST00000262188 LPAP08519 4548 aa15.24■□□□□ 0.03
SMARCD3-201ENST00000262188 SPATA8Q6RVD6 105 aa15.22■□□□□ 0.03
SMARCD3-201ENST00000262188 ADM2Q7Z4H4 148 aa15.21■□□□□ 0.03
SMARCD3-201ENST00000262188 C9orf92A6NGG3 77 aa15.2■□□□□ 0.02
SMARCD3-201ENST00000262188 IGHV6-1A0A0B4J1U7 121 aa15.19■□□□□ 0.02
SMARCD3-201ENST00000262188 MMP24-AS1A0A0U1RRL7 71 aa15.19■□□□□ 0.02
SMARCD3-201ENST00000262188 HMCN2Q8NDA2 5059 aa15.18■□□□□ 0.02
SMARCD3-201ENST00000262188 PCOTHQ58A44 107 aa15.18■□□□□ 0.02
SMARCD3-201ENST00000262188 NOTCH2NLQ7Z3S9 236 aa15.18■□□□□ 0.02
SMARCD3-201ENST00000262188 A0A1B0GVX0 72 aa15.14■□□□□ 0.01
SMARCD3-201ENST00000262188 KRTAP13-3Q3SY46 172 aa15.11■□□□□ 0.01
SMARCD3-201ENST00000262188 LRP2P98164 4655 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms