RNA–Protein interactions for RNA: ENST00000262105.6

MCM4-201, Transcript of minichromosome maintenance complex component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM4, Length 4,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-201ENST00000262105 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
MCM4-201ENST00000262105 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
MCM4-201ENST00000262105 Q5XG85 94 aa9.52□□□□□ -0.89
MCM4-201ENST00000262105 J3QL48 77 aa9.51□□□□□ -0.89
MCM4-201ENST00000262105 PRR15LQ9BU68 103 aa9.5□□□□□ -0.89
MCM4-201ENST00000262105 Q5VSD8 79 aa9.49□□□□□ -0.89
MCM4-201ENST00000262105 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
MCM4-201ENST00000262105 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
MCM4-201ENST00000262105 ACYP2P14621 99 aa9.45□□□□□ -0.9
MCM4-201ENST00000262105 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
MCM4-201ENST00000262105 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
MCM4-201ENST00000262105 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
MCM4-201ENST00000262105 COA5Q86WW8 74 aa9.4□□□□□ -0.91
MCM4-201ENST00000262105 A8MUN3 132 aa9.39□□□□□ -0.91
MCM4-201ENST00000262105 Q6ZSA8 131 aa9.39□□□□□ -0.91
MCM4-201ENST00000262105 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
MCM4-201ENST00000262105 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
MCM4-201ENST00000262105 IGLV7-46A0A075B6I9 117 aa9.34□□□□□ -0.91
MCM4-201ENST00000262105 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
MCM4-201ENST00000262105 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
MCM4-201ENST00000262105 Q8N1X5 172 aa9.33□□□□□ -0.92
MCM4-201ENST00000262105 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
MCM4-201ENST00000262105 A0A1B0GU69 56 aa9.25□□□□□ -0.93
MCM4-201ENST00000262105 HRES1P13985 223 aa9.25□□□□□ -0.93
MCM4-201ENST00000262105 Q5W150 140 aa9.25□□□□□ -0.93
MCM4-201ENST00000262105 CYP4F30PQ9H0H9 118 aa9.23□□□□□ -0.93
MCM4-201ENST00000262105 DNAH9Q9NYC9 4486 aa9.23□□□□□ -0.93
MCM4-201ENST00000262105 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.93
MCM4-201ENST00000262105 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.93
MCM4-201ENST00000262105 DNHD1Q96M86 4753 aa9.21□□□□□ -0.94
MCM4-201ENST00000262105 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
MCM4-201ENST00000262105 SPINK7P58062 85 aa9.11□□□□□ -0.95
MCM4-201ENST00000262105 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
MCM4-201ENST00000262105 K7ERS5 55 aa9.07□□□□□ -0.96
MCM4-201ENST00000262105 A0A1B0GVY2 172 aa9.05□□□□□ -0.96
MCM4-201ENST00000262105 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
MCM4-201ENST00000262105 ANK2Q01484 3957 aa9.03□□□□□ -0.96
MCM4-201ENST00000262105 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
MCM4-201ENST00000262105 PRKDCP78527 4128 aaKnown RBP9□□□□□ -0.97
MCM4-201ENST00000262105 KTN1-AS1Q86SY8 53 aa8.98□□□□□ -0.97
MCM4-201ENST00000262105 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
MCM4-201ENST00000262105 A8MU10 97 aa8.96□□□□□ -0.97
MCM4-201ENST00000262105 Q1T7F1 81 aa8.96□□□□□ -0.97
MCM4-201ENST00000262105 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
MCM4-201ENST00000262105 UQCR11O14957 56 aa8.92□□□□□ -0.98
MCM4-201ENST00000262105 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
MCM4-201ENST00000262105 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
MCM4-201ENST00000262105 Q5VV11 94 aa8.88□□□□□ -0.99
MCM4-201ENST00000262105 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
MCM4-201ENST00000262105 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
MCM4-201ENST00000262105 DNAH1Q9P2D7 4330 aa8.82□□□□□ -1
MCM4-201ENST00000262105 CMYA5Q8N3K9 4069 aa8.81□□□□□ -1
MCM4-201ENST00000262105 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
MCM4-201ENST00000262105 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
MCM4-201ENST00000262105 Q75L30 129 aa8.79□□□□□ -1
MCM4-201ENST00000262105 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
MCM4-201ENST00000262105 CDC42SE1Q9NRR8 79 aa8.77□□□□□ -1.01
MCM4-201ENST00000262105 A8MUU9 505 aa8.77□□□□□ -1.01
MCM4-201ENST00000262105 LCA10Q71F78 164 aa8.76□□□□□ -1.01
MCM4-201ENST00000262105 DNAH3Q8TD57 4116 aa8.76□□□□□ -1.01
MCM4-201ENST00000262105 A0A0D9SG42 100 aa8.76□□□□□ -1.01
MCM4-201ENST00000262105 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
MCM4-201ENST00000262105 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
MCM4-201ENST00000262105 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
MCM4-201ENST00000262105 S4R3F8 94 aa8.74□□□□□ -1.01
MCM4-201ENST00000262105 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
MCM4-201ENST00000262105 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
MCM4-201ENST00000262105 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
MCM4-201ENST00000262105 A0A1B0GU33 70 aa8.69□□□□□ -1.02
MCM4-201ENST00000262105 LYSTQ99698 3801 aa8.69□□□□□ -1.02
MCM4-201ENST00000262105 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
MCM4-201ENST00000262105 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
MCM4-201ENST00000262105 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
MCM4-201ENST00000262105 XP32Q5T750 250 aa8.67□□□□□ -1.02
MCM4-201ENST00000262105 H3BS24 57 aa8.66□□□□□ -1.02
MCM4-201ENST00000262105 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
MCM4-201ENST00000262105 M0R2T5 61 aa8.58□□□□□ -1.04
MCM4-201ENST00000262105 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
MCM4-201ENST00000262105 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
MCM4-201ENST00000262105 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
MCM4-201ENST00000262105 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
MCM4-201ENST00000262105 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
MCM4-201ENST00000262105 FAT1Q14517 4588 aa8.52□□□□□ -1.05
MCM4-201ENST00000262105 DNAH7Q8WXX0 4024 aa8.51□□□□□ -1.05
MCM4-201ENST00000262105 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
MCM4-201ENST00000262105 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
MCM4-201ENST00000262105 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
MCM4-201ENST00000262105 LRP1BQ9NZR2 4599 aa8.47□□□□□ -1.05
MCM4-201ENST00000262105 DNAH2Q9P225 4427 aa8.47□□□□□ -1.05
MCM4-201ENST00000262105 A6NN06 94 aa8.47□□□□□ -1.05
MCM4-201ENST00000262105 TPRXLQ17RH7 258 aa8.46□□□□□ -1.05
MCM4-201ENST00000262105 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
MCM4-201ENST00000262105 R4GN34 69 aa8.42□□□□□ -1.06
MCM4-201ENST00000262105 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
MCM4-201ENST00000262105 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
MCM4-201ENST00000262105 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
MCM4-201ENST00000262105 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
MCM4-201ENST00000262105 M0QZ58 72 aa8.34□□□□□ -1.07
MCM4-201ENST00000262105 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
MCM4-201ENST00000262105 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms