RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CD164Q04900 197 aa11.02□□□□□ -0.65
LRP3-201ENST00000253193 PLAC8Q9NZF1 115 aa11.01□□□□□ -0.65
LRP3-201ENST00000253193 LINC00483Q53H64 154 aa11□□□□□ -0.65
LRP3-201ENST00000253193 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
LRP3-201ENST00000253193 FRAS1Q86XX4 4008 aa10.93□□□□□ -0.66
LRP3-201ENST00000253193 PLECQ15149 4684 aaKnown RBP10.93□□□□□ -0.66
LRP3-201ENST00000253193 Q6ZR54 194 aa10.92□□□□□ -0.66
LRP3-201ENST00000253193 LCA10Q71F78 164 aa10.91□□□□□ -0.66
LRP3-201ENST00000253193 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
LRP3-201ENST00000253193 LINC00313P59037 77 aa10.9□□□□□ -0.67
LRP3-201ENST00000253193 MEGF8Q7Z7M0 2845 aa10.89□□□□□ -0.67
LRP3-201ENST00000253193 LOC101927531A0A1B0GV80 90 aa10.89□□□□□ -0.67
LRP3-201ENST00000253193 FBN3Q75N90 2809 aa10.88□□□□□ -0.67
LRP3-201ENST00000253193 KRTAP10-2P60368 255 aa10.86□□□□□ -0.67
LRP3-201ENST00000253193 SSBP3-AS1Q7Z2R9 100 aa10.86□□□□□ -0.67
LRP3-201ENST00000253193 PRR26Q8N8Z3 221 aa10.86□□□□□ -0.67
LRP3-201ENST00000253193 Q5W150 140 aa10.85□□□□□ -0.67
LRP3-201ENST00000253193 HRES1P13985 223 aa10.84□□□□□ -0.67
LRP3-201ENST00000253193 IGKV2D-30A0A075B6S6 120 aa10.82□□□□□ -0.68
LRP3-201ENST00000253193 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
LRP3-201ENST00000253193 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
LRP3-201ENST00000253193 ACYP2P14621 99 aa10.79□□□□□ -0.68
LRP3-201ENST00000253193 Q75L30 129 aa10.79□□□□□ -0.68
LRP3-201ENST00000253193 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
LRP3-201ENST00000253193 ASB16-AS1Q495Z4 193 aa10.78□□□□□ -0.68
LRP3-201ENST00000253193 SPINK7P58062 85 aa10.75□□□□□ -0.69
LRP3-201ENST00000253193 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
LRP3-201ENST00000253193 PLA2G1BP04054 148 aaKnown RBP10.74□□□□□ -0.69
LRP3-201ENST00000253193 KRTAP10-1P60331 282 aa10.71□□□□□ -0.69
LRP3-201ENST00000253193 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
LRP3-201ENST00000253193 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
LRP3-201ENST00000253193 TYMSOSQ8TAI1 123 aa10.7□□□□□ -0.7
LRP3-201ENST00000253193 LINC01558Q9Y6Z2 57 aa10.7□□□□□ -0.7
LRP3-201ENST00000253193 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
LRP3-201ENST00000253193 KMT2AQ03164 3969 aa10.68□□□□□ -0.7
LRP3-201ENST00000253193 SPINK1P00995 79 aa10.67□□□□□ -0.7
LRP3-201ENST00000253193 KTN1-AS1Q86SY8 53 aa10.66□□□□□ -0.7
LRP3-201ENST00000253193 CDC42SE1Q9NRR8 79 aa10.66□□□□□ -0.7
LRP3-201ENST00000253193 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
LRP3-201ENST00000253193 DYNC2H1Q8NCM8 4307 aaKnown RBP10.66□□□□□ -0.7
LRP3-201ENST00000253193 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.71
LRP3-201ENST00000253193 A6NN06 94 aa10.64□□□□□ -0.71
LRP3-201ENST00000253193 A0A1B0GU69 56 aa10.63□□□□□ -0.71
LRP3-201ENST00000253193 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
LRP3-201ENST00000253193 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
LRP3-201ENST00000253193 DNAH2Q9P225 4427 aa10.6□□□□□ -0.71
LRP3-201ENST00000253193 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
LRP3-201ENST00000253193 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
LRP3-201ENST00000253193 VPS13DQ5THJ4 4388 aa10.56□□□□□ -0.72
LRP3-201ENST00000253193 KRTAP13-3Q3SY46 172 aa10.52□□□□□ -0.73
LRP3-201ENST00000253193 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
LRP3-201ENST00000253193 DNAH6Q9C0G6 4158 aa10.5□□□□□ -0.73
LRP3-201ENST00000253193 Q8N1X5 172 aa10.5□□□□□ -0.73
LRP3-201ENST00000253193 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
LRP3-201ENST00000253193 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
LRP3-201ENST00000253193 ALMS1Q8TCU4 4167 aa10.45□□□□□ -0.74
LRP3-201ENST00000253193 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
LRP3-201ENST00000253193 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
LRP3-201ENST00000253193 KRTAP1-4P0C5Y4 121 aa10.42□□□□□ -0.74
LRP3-201ENST00000253193 Q6ZSA8 131 aa10.41□□□□□ -0.74
LRP3-201ENST00000253193 ADM2Q7Z4H4 148 aa10.41□□□□□ -0.74
LRP3-201ENST00000253193 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
LRP3-201ENST00000253193 UQCR11O14957 56 aa10.37□□□□□ -0.75
LRP3-201ENST00000253193 MIR22HGQ0VDD5 57 aa10.36□□□□□ -0.75
LRP3-201ENST00000253193 KRTAP16-1A8MUX0 517 aa10.33□□□□□ -0.76
LRP3-201ENST00000253193 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
LRP3-201ENST00000253193 DNAH5Q8TE73 4624 aa10.3□□□□□ -0.76
LRP3-201ENST00000253193 DMBT1Q9UGM3 2413 aaPredicted RBP10.2□□□□□ -0.78
LRP3-201ENST00000253193 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
LRP3-201ENST00000253193 VPS13BQ7Z7G8 4022 aa10.15□□□□□ -0.79
LRP3-201ENST00000253193 HYDINQ4G0P3 5121 aa10.1□□□□□ -0.79
LRP3-201ENST00000253193 FAT2Q9NYQ8 4349 aa10.07□□□□□ -0.8
LRP3-201ENST00000253193 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
LRP3-201ENST00000253193 PKD1P98161 4303 aa10.03□□□□□ -0.8
LRP3-201ENST00000253193 RPS29P62273 56 aaKnown RBP10.01□□□□□ -0.81
LRP3-201ENST00000253193 CSAG1Q6PB30 78 aa10□□□□□ -0.81
LRP3-201ENST00000253193 A0A1B0GU33 70 aa9.98□□□□□ -0.81
LRP3-201ENST00000253193 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
LRP3-201ENST00000253193 A8MUU9 505 aa9.94□□□□□ -0.82
LRP3-201ENST00000253193 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
LRP3-201ENST00000253193 FAT1Q14517 4588 aa9.93□□□□□ -0.82
LRP3-201ENST00000253193 K7ERS5 55 aa9.92□□□□□ -0.82
LRP3-201ENST00000253193 PKHD1P08F94 4074 aa9.9□□□□□ -0.82
LRP3-201ENST00000253193 H0YAA0 97 aa9.84□□□□□ -0.83
LRP3-201ENST00000253193 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
LRP3-201ENST00000253193 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
LRP3-201ENST00000253193 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
LRP3-201ENST00000253193 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
LRP3-201ENST00000253193 A0A0D9SG42 100 aa9.78□□□□□ -0.84
LRP3-201ENST00000253193 A0A1B0GVY2 172 aa9.78□□□□□ -0.84
LRP3-201ENST00000253193 Q5VSD8 79 aa9.77□□□□□ -0.85
LRP3-201ENST00000253193 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
LRP3-201ENST00000253193 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
LRP3-201ENST00000253193 KRTAP21-3Q3LHN1 58 aa9.66□□□□□ -0.86
LRP3-201ENST00000253193 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
LRP3-201ENST00000253193 S4R3F8 94 aa9.61□□□□□ -0.87
LRP3-201ENST00000253193 RPL37P61927 97 aaKnown RBP9.57□□□□□ -0.88
LRP3-201ENST00000253193 H3BS24 57 aa9.56□□□□□ -0.88
LRP3-201ENST00000253193 KRTAP25-1Q3LHN0 102 aa9.56□□□□□ -0.88
LRP3-201ENST00000253193 XP32Q5T750 250 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms