RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CASC10Q5T4H9 136 aa3.51□□□□□ -1.85
RFX4-201ENST00000229387 LINC00483Q53H64 154 aa3.51□□□□□ -1.85
RFX4-201ENST00000229387 TP53AIP1Q9HCN2 124 aa3.51□□□□□ -1.85
RFX4-201ENST00000229387 A8MWP4 228 aa3.5□□□□□ -1.85
RFX4-201ENST00000229387 KRTAP19-1Q8IUB9 90 aa3.5□□□□□ -1.85
RFX4-201ENST00000229387 LYSTQ99698 3801 aa3.49□□□□□ -1.85
RFX4-201ENST00000229387 A0A1B0GU69 56 aa3.48□□□□□ -1.85
RFX4-201ENST00000229387 IGKV2-24A0A0C4DH68 120 aa3.48□□□□□ -1.85
RFX4-201ENST00000229387 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
RFX4-201ENST00000229387 CHTF8P0CG12 524 aa3.47□□□□□ -1.85
RFX4-201ENST00000229387 PCOTHQ58A44 107 aa3.47□□□□□ -1.85
RFX4-201ENST00000229387 EGFEM1PQ0D2K5 195 aa3.47□□□□□ -1.85
RFX4-201ENST00000229387 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
RFX4-201ENST00000229387 C15orf56Q8N910 161 aa3.46□□□□□ -1.85
RFX4-201ENST00000229387 K7EIL1 84 aa3.46□□□□□ -1.86
RFX4-201ENST00000229387 ACYP2P14621 99 aa3.46□□□□□ -1.86
RFX4-201ENST00000229387 COL7A1Q02388 2944 aa3.46□□□□□ -1.86
RFX4-201ENST00000229387 A0A0G2JQZ4 141 aa3.45□□□□□ -1.86
RFX4-201ENST00000229387 A0A1W2PNN7 141 aa3.45□□□□□ -1.86
RFX4-201ENST00000229387 A8MUU9 505 aa3.45□□□□□ -1.86
RFX4-201ENST00000229387 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
RFX4-201ENST00000229387 IGLV8-61A0A075B6I0 122 aa3.45□□□□□ -1.86
RFX4-201ENST00000229387 SRRM2Q9UQ35 2752 aaKnown RBP3.44□□□□□ -1.86
RFX4-201ENST00000229387 Q6ZRX8 168 aa3.44□□□□□ -1.86
RFX4-201ENST00000229387 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
RFX4-201ENST00000229387 LINC00472Q9H8W2 130 aa3.44□□□□□ -1.86
RFX4-201ENST00000229387 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
RFX4-201ENST00000229387 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
RFX4-201ENST00000229387 KRTAP26-1Q6PEX3 210 aa3.43□□□□□ -1.86
RFX4-201ENST00000229387 DMAC1Q96GE9 116 aa3.43□□□□□ -1.86
RFX4-201ENST00000229387 DNAH10Q8IVF4 4471 aa3.43□□□□□ -1.86
RFX4-201ENST00000229387 RPL37AP61513 92 aaKnown RBP3.43□□□□□ -1.86
RFX4-201ENST00000229387 A0A096LNI7 61 aa3.42□□□□□ -1.86
RFX4-201ENST00000229387 SPRR1AP35321 89 aa3.42□□□□□ -1.86
RFX4-201ENST00000229387 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
RFX4-201ENST00000229387 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
RFX4-201ENST00000229387 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
RFX4-201ENST00000229387 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
RFX4-201ENST00000229387 UBE2DNLQ8IWF7 75 aa3.41□□□□□ -1.86
RFX4-201ENST00000229387 NUPR2A6NF83 97 aa3.4□□□□□ -1.86
RFX4-201ENST00000229387 IGLV7-43P04211 117 aa3.4□□□□□ -1.86
RFX4-201ENST00000229387 HUWE1Q7Z6Z7 4374 aaKnown RBP3.4□□□□□ -1.87
RFX4-201ENST00000229387 PRLHP81277 87 aa3.39□□□□□ -1.87
RFX4-201ENST00000229387 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 TGP01266 2768 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 Q5W150 140 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
RFX4-201ENST00000229387 H3BNG1 76 aa3.37□□□□□ -1.87
RFX4-201ENST00000229387 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
RFX4-201ENST00000229387 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
RFX4-201ENST00000229387 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
RFX4-201ENST00000229387 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
RFX4-201ENST00000229387 K7ERS5 55 aa3.36□□□□□ -1.87
RFX4-201ENST00000229387 A0A087WTM6 91 aa3.35□□□□□ -1.87
RFX4-201ENST00000229387 DNAH7Q8WXX0 4024 aa3.35□□□□□ -1.87
RFX4-201ENST00000229387 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
RFX4-201ENST00000229387 PANO1I0J062 215 aa3.34□□□□□ -1.87
RFX4-201ENST00000229387 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
RFX4-201ENST00000229387 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.88
RFX4-201ENST00000229387 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
RFX4-201ENST00000229387 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
RFX4-201ENST00000229387 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
RFX4-201ENST00000229387 MEGF8Q7Z7M0 2845 aa3.32□□□□□ -1.88
RFX4-201ENST00000229387 Q8N1X5 172 aa3.32□□□□□ -1.88
RFX4-201ENST00000229387 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
RFX4-201ENST00000229387 MRPL34Q9BQ48 92 aaKnown RBP3.31□□□□□ -1.88
RFX4-201ENST00000229387 APLNQ9ULZ1 77 aa3.31□□□□□ -1.88
RFX4-201ENST00000229387 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
RFX4-201ENST00000229387 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
RFX4-201ENST00000229387 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
RFX4-201ENST00000229387 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
RFX4-201ENST00000229387 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
RFX4-201ENST00000229387 SPRR1BP22528 89 aa3.3□□□□□ -1.88
RFX4-201ENST00000229387 LY6G6CO95867 125 aa3.29□□□□□ -1.88
RFX4-201ENST00000229387 Q96NJ1 140 aa3.29□□□□□ -1.88
RFX4-201ENST00000229387 KMT2AQ03164 3969 aa3.28□□□□□ -1.88
RFX4-201ENST00000229387 NBDYA0A0U1RRE5 68 aa3.28□□□□□ -1.88
RFX4-201ENST00000229387 A0A1B0GVX0 72 aa3.28□□□□□ -1.88
RFX4-201ENST00000229387 FBN3Q75N90 2809 aa3.28□□□□□ -1.89
RFX4-201ENST00000229387 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.89
RFX4-201ENST00000229387 DNAH1Q9P2D7 4330 aa3.27□□□□□ -1.89
RFX4-201ENST00000229387 H0YAA0 97 aa3.27□□□□□ -1.89
RFX4-201ENST00000229387 SPINK6Q6UWN8 80 aa3.26□□□□□ -1.89
RFX4-201ENST00000229387 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
RFX4-201ENST00000229387 FRAS1Q86XX4 4008 aa3.24□□□□□ -1.89
RFX4-201ENST00000229387 Q6ZSA8 131 aa3.24□□□□□ -1.89
RFX4-201ENST00000229387 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
RFX4-201ENST00000229387 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
RFX4-201ENST00000229387 PSORS1C2Q9UIG4 136 aa3.23□□□□□ -1.89
RFX4-201ENST00000229387 Q6ZRN7 208 aaPredicted RBP3.23□□□□□ -1.89
RFX4-201ENST00000229387 C14orf177Q52M58 125 aa3.22□□□□□ -1.89
RFX4-201ENST00000229387 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
RFX4-201ENST00000229387 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
RFX4-201ENST00000229387 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
RFX4-201ENST00000229387 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
RFX4-201ENST00000229387 DNAH2Q9P225 4427 aa3.19□□□□□ -1.9
RFX4-201ENST00000229387 KRTAP10-2P60368 255 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms