RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 DNAH3Q8TD57 4116 aa12.43□□□□□ -0.42
PHOX2B-201ENST00000226382 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
PHOX2B-201ENST00000226382 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
PHOX2B-201ENST00000226382 TGP01266 2768 aa12.41□□□□□ -0.42
PHOX2B-201ENST00000226382 C14orf177Q52M58 125 aa12.4□□□□□ -0.42
PHOX2B-201ENST00000226382 CSAG1Q6PB30 78 aa12.39□□□□□ -0.43
PHOX2B-201ENST00000226382 HRES1P13985 223 aa12.38□□□□□ -0.43
PHOX2B-201ENST00000226382 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
PHOX2B-201ENST00000226382 A0A1B0GVX0 72 aa12.35□□□□□ -0.43
PHOX2B-201ENST00000226382 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
PHOX2B-201ENST00000226382 KRTAP13-1Q8IUC0 172 aa12.34□□□□□ -0.43
PHOX2B-201ENST00000226382 TP53AIP1Q9HCN2 124 aa12.32□□□□□ -0.44
PHOX2B-201ENST00000226382 MRPL34Q9BQ48 92 aaKnown RBP12.32□□□□□ -0.44
PHOX2B-201ENST00000226382 NBDYA0A0U1RRE5 68 aa12.3□□□□□ -0.44
PHOX2B-201ENST00000226382 Q5W150 140 aa12.29□□□□□ -0.44
PHOX2B-201ENST00000226382 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
PHOX2B-201ENST00000226382 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
PHOX2B-201ENST00000226382 Q6ZR54 194 aa12.28□□□□□ -0.44
PHOX2B-201ENST00000226382 RTL8CO15255 209 aa12.27□□□□□ -0.44
PHOX2B-201ENST00000226382 CIRBP-AS1Q8TBR5 109 aa12.27□□□□□ -0.44
PHOX2B-201ENST00000226382 WWC2-AS2Q96NR7 200 aa12.26□□□□□ -0.45
PHOX2B-201ENST00000226382 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
PHOX2B-201ENST00000226382 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
PHOX2B-201ENST00000226382 ASB16-AS1Q495Z4 193 aa12.23□□□□□ -0.45
PHOX2B-201ENST00000226382 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
PHOX2B-201ENST00000226382 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
PHOX2B-201ENST00000226382 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
PHOX2B-201ENST00000226382 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
PHOX2B-201ENST00000226382 A0A087WTM6 91 aa12.12□□□□□ -0.47
PHOX2B-201ENST00000226382 LINC00483Q53H64 154 aa12.12□□□□□ -0.47
PHOX2B-201ENST00000226382 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
PHOX2B-201ENST00000226382 ZNF861PO60384 105 aa12.11□□□□□ -0.47
PHOX2B-201ENST00000226382 STARD9Q9P2P6 4700 aa12.1□□□□□ -0.47
PHOX2B-201ENST00000226382 ROMO1P60602 79 aa12.04□□□□□ -0.48
PHOX2B-201ENST00000226382 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
PHOX2B-201ENST00000226382 DNAH17Q9UFH2 4485 aa12.01□□□□□ -0.49
PHOX2B-201ENST00000226382 ACYP2P14621 99 aa12.01□□□□□ -0.49
PHOX2B-201ENST00000226382 SPATA8Q6RVD6 105 aa12□□□□□ -0.49
PHOX2B-201ENST00000226382 MIR22HGQ0VDD5 57 aa11.99□□□□□ -0.49
PHOX2B-201ENST00000226382 A0A0A0MQY5 61 aa11.98□□□□□ -0.49
PHOX2B-201ENST00000226382 A0A1B0GU69 56 aa11.97□□□□□ -0.49
PHOX2B-201ENST00000226382 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
PHOX2B-201ENST00000226382 IGKV2D-30A0A075B6S6 120 aa11.95□□□□□ -0.5
PHOX2B-201ENST00000226382 IGKV2-30P06310 120 aa11.95□□□□□ -0.5
PHOX2B-201ENST00000226382 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
PHOX2B-201ENST00000226382 IGLV7-43P04211 117 aa11.93□□□□□ -0.5
PHOX2B-201ENST00000226382 DNAH2Q9P225 4427 aa11.92□□□□□ -0.5
PHOX2B-201ENST00000226382 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
PHOX2B-201ENST00000226382 SPINK1P00995 79 aa11.89□□□□□ -0.51
PHOX2B-201ENST00000226382 UQCR11O14957 56 aa11.88□□□□□ -0.51
PHOX2B-201ENST00000226382 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
PHOX2B-201ENST00000226382 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
PHOX2B-201ENST00000226382 DMAC1Q96GE9 116 aa11.85□□□□□ -0.51
PHOX2B-201ENST00000226382 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
PHOX2B-201ENST00000226382 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
PHOX2B-201ENST00000226382 LY6G6CO95867 125 aa11.8□□□□□ -0.52
PHOX2B-201ENST00000226382 DNAH11Q96DT5 4516 aa11.79□□□□□ -0.52
PHOX2B-201ENST00000226382 P0C880 135 aa11.76□□□□□ -0.53
PHOX2B-201ENST00000226382 KRTAP10-2P60368 255 aa11.75□□□□□ -0.53
PHOX2B-201ENST00000226382 KRTAP25-1Q3LHN0 102 aa11.75□□□□□ -0.53
PHOX2B-201ENST00000226382 KRTAP13-2Q52LG2 175 aa11.75□□□□□ -0.53
PHOX2B-201ENST00000226382 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
PHOX2B-201ENST00000226382 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
PHOX2B-201ENST00000226382 Q8N1X5 172 aa11.73□□□□□ -0.53
PHOX2B-201ENST00000226382 LRP1BQ9NZR2 4599 aa11.68□□□□□ -0.54
PHOX2B-201ENST00000226382 FLG2Q5D862 2391 aaPredicted RBP11.68□□□□□ -0.54
PHOX2B-201ENST00000226382 KRTAP16-1A8MUX0 517 aa11.6□□□□□ -0.55
PHOX2B-201ENST00000226382 CRIPTQ9P021 101 aa11.6□□□□□ -0.55
PHOX2B-201ENST00000226382 A8MUU9 505 aa11.6□□□□□ -0.55
PHOX2B-201ENST00000226382 DNAH5Q8TE73 4624 aa11.59□□□□□ -0.55
PHOX2B-201ENST00000226382 KRTAP10-1P60331 282 aa11.54□□□□□ -0.56
PHOX2B-201ENST00000226382 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
PHOX2B-201ENST00000226382 TYMSOSQ8TAI1 123 aa11.47□□□□□ -0.57
PHOX2B-201ENST00000226382 NDUFAF8A1L188 74 aa11.46□□□□□ -0.58
PHOX2B-201ENST00000226382 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
PHOX2B-201ENST00000226382 DNHD1Q96M86 4753 aa11.44□□□□□ -0.58
PHOX2B-201ENST00000226382 C9orf92A6NGG3 77 aa11.44□□□□□ -0.58
PHOX2B-201ENST00000226382 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
PHOX2B-201ENST00000226382 DMBT1Q9UGM3 2413 aaPredicted RBP11.42□□□□□ -0.58
PHOX2B-201ENST00000226382 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
PHOX2B-201ENST00000226382 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.59
PHOX2B-201ENST00000226382 SPINT4Q6UDR6 99 aa11.38□□□□□ -0.59
PHOX2B-201ENST00000226382 SMR3BP02814 79 aaPredicted RBP11.31□□□□□ -0.6
PHOX2B-201ENST00000226382 Q6ZSA8 131 aa11.31□□□□□ -0.6
PHOX2B-201ENST00000226382 C20orf166-AS1Q96NR2 134 aa11.3□□□□□ -0.6
PHOX2B-201ENST00000226382 H0YAA0 97 aa11.29□□□□□ -0.6
PHOX2B-201ENST00000226382 PKHD1P08F94 4074 aa11.25□□□□□ -0.61
PHOX2B-201ENST00000226382 PKD1P98161 4303 aa11.21□□□□□ -0.62
PHOX2B-201ENST00000226382 A0A1B0GU33 70 aa11.18□□□□□ -0.62
PHOX2B-201ENST00000226382 FAT1Q14517 4588 aa11.15□□□□□ -0.62
PHOX2B-201ENST00000226382 KRTAP3-1Q9BYR8 98 aa11.14□□□□□ -0.63
PHOX2B-201ENST00000226382 H1FX-AS1Q4G0G2 97 aa11.04□□□□□ -0.64
PHOX2B-201ENST00000226382 K7ERS5 55 aa10.98□□□□□ -0.65
PHOX2B-201ENST00000226382 LUZP6Q538Z0 58 aa10.98□□□□□ -0.65
PHOX2B-201ENST00000226382 KRTAP15-1Q3LI76 137 aa10.97□□□□□ -0.65
PHOX2B-201ENST00000226382 A0A0D9SG42 100 aa10.96□□□□□ -0.66
PHOX2B-201ENST00000226382 COX6B2Q6YFQ2 88 aa10.93□□□□□ -0.66
PHOX2B-201ENST00000226382 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
PHOX2B-201ENST00000226382 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
PHOX2B-201ENST00000226382 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms