RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 NREPQ16612 68 aa9.81□□□□□ -0.84
PFN1-201ENST00000225655 LINC00472Q9H8W2 130 aa9.81□□□□□ -0.84
PFN1-201ENST00000225655 C9orf92A6NGG3 77 aa9.8□□□□□ -0.84
PFN1-201ENST00000225655 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
PFN1-201ENST00000225655 NDUFB1O75438 58 aa9.74□□□□□ -0.85
PFN1-201ENST00000225655 PCOTHQ58A44 107 aa9.73□□□□□ -0.85
PFN1-201ENST00000225655 UBL5Q9BZL1 73 aa9.73□□□□□ -0.85
PFN1-201ENST00000225655 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
PFN1-201ENST00000225655 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
PFN1-201ENST00000225655 KRTAP19-2Q3LHN2 52 aa9.69□□□□□ -0.86
PFN1-201ENST00000225655 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
PFN1-201ENST00000225655 C8orf87E5RJ46 101 aa9.68□□□□□ -0.86
PFN1-201ENST00000225655 BPY2O14599 106 aa9.68□□□□□ -0.86
PFN1-201ENST00000225655 LINC00313P59037 77 aa9.68□□□□□ -0.86
PFN1-201ENST00000225655 Q6ZVQ6 151 aa9.68□□□□□ -0.86
PFN1-201ENST00000225655 A8MWP4 228 aa9.67□□□□□ -0.86
PFN1-201ENST00000225655 ACYP1P07311 99 aa9.66□□□□□ -0.86
PFN1-201ENST00000225655 LINC00846Q9NV44 126 aa9.66□□□□□ -0.86
PFN1-201ENST00000225655 DSCR10P59022 87 aa9.65□□□□□ -0.86
PFN1-201ENST00000225655 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
PFN1-201ENST00000225655 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
PFN1-201ENST00000225655 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
PFN1-201ENST00000225655 MT1HP80294 61 aa9.6□□□□□ -0.87
PFN1-201ENST00000225655 IGKV3D-7A0A0C4DH55 119 aa9.59□□□□□ -0.87
PFN1-201ENST00000225655 J3QR89 54 aa9.59□□□□□ -0.87
PFN1-201ENST00000225655 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
PFN1-201ENST00000225655 Q75L30 129 aa9.58□□□□□ -0.88
PFN1-201ENST00000225655 PCP4P48539 62 aa9.56□□□□□ -0.88
PFN1-201ENST00000225655 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
PFN1-201ENST00000225655 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
PFN1-201ENST00000225655 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
PFN1-201ENST00000225655 K7EQZ3 153 aa9.54□□□□□ -0.88
PFN1-201ENST00000225655 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
PFN1-201ENST00000225655 A8MUU9 505 aa9.52□□□□□ -0.89
PFN1-201ENST00000225655 CXCL6P80162 114 aa9.52□□□□□ -0.89
PFN1-201ENST00000225655 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
PFN1-201ENST00000225655 FSIP2Q5CZC0 6907 aa9.51□□□□□ -0.89
PFN1-201ENST00000225655 ATP5EP2Q5VTU8 51 aa9.5□□□□□ -0.89
PFN1-201ENST00000225655 Q8N9L7 120 aa9.47□□□□□ -0.89
PFN1-201ENST00000225655 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
PFN1-201ENST00000225655 hDV103S1A0JD37 113 aa9.46□□□□□ -0.9
PFN1-201ENST00000225655 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
PFN1-201ENST00000225655 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
PFN1-201ENST00000225655 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
PFN1-201ENST00000225655 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
PFN1-201ENST00000225655 MRPL34Q9BQ48 92 aaKnown RBP9.44□□□□□ -0.9
PFN1-201ENST00000225655 CRCT1Q9UGL9 99 aa9.44□□□□□ -0.9
PFN1-201ENST00000225655 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
PFN1-201ENST00000225655 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
PFN1-201ENST00000225655 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
PFN1-201ENST00000225655 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
PFN1-201ENST00000225655 M0R2T5 61 aa9.4□□□□□ -0.9
PFN1-201ENST00000225655 NDUFS5O43920 106 aa9.4□□□□□ -0.9
PFN1-201ENST00000225655 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
PFN1-201ENST00000225655 K7ERU9 68 aa9.39□□□□□ -0.91
PFN1-201ENST00000225655 HIST1H4AP62805 103 aaKnown RBP9.35□□□□□ -0.91
PFN1-201ENST00000225655 ZCCHC13Q8WW36 166 aaKnown RBP9.35□□□□□ -0.91
PFN1-201ENST00000225655 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
PFN1-201ENST00000225655 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
PFN1-201ENST00000225655 A0A087WVE0 104 aa9.17□□□□□ -0.94
PFN1-201ENST00000225655 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
PFN1-201ENST00000225655 SPINK7P58062 85 aa9.17□□□□□ -0.94
PFN1-201ENST00000225655 SVIPQ8NHG7 77 aa9.14□□□□□ -0.95
PFN1-201ENST00000225655 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
PFN1-201ENST00000225655 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
PFN1-201ENST00000225655 Q5W150 140 aa9.12□□□□□ -0.95
PFN1-201ENST00000225655 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
PFN1-201ENST00000225655 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
PFN1-201ENST00000225655 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
PFN1-201ENST00000225655 UQCRQO14949 82 aa9.09□□□□□ -0.95
PFN1-201ENST00000225655 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
PFN1-201ENST00000225655 MT-ATP8P03928 68 aa9.08□□□□□ -0.96
PFN1-201ENST00000225655 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
PFN1-201ENST00000225655 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
PFN1-201ENST00000225655 TRAV22A0A0B4J277 110 aa9.06□□□□□ -0.96
PFN1-201ENST00000225655 HRES1P13985 223 aa9.06□□□□□ -0.96
PFN1-201ENST00000225655 ATOX1O00244 68 aa9.03□□□□□ -0.96
PFN1-201ENST00000225655 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
PFN1-201ENST00000225655 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
PFN1-201ENST00000225655 H0Y9P7 68 aa8.98□□□□□ -0.97
PFN1-201ENST00000225655 MP68P56378 58 aa8.97□□□□□ -0.97
PFN1-201ENST00000225655 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
PFN1-201ENST00000225655 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
PFN1-201ENST00000225655 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
PFN1-201ENST00000225655 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
PFN1-201ENST00000225655 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
PFN1-201ENST00000225655 MT2AP02795 61 aa8.92□□□□□ -0.98
PFN1-201ENST00000225655 CYP4F30PQ9H0H9 118 aa8.9□□□□□ -0.98
PFN1-201ENST00000225655 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
PFN1-201ENST00000225655 C1orf64Q8NEQ6 169 aa8.89□□□□□ -0.99
PFN1-201ENST00000225655 H3BPC8 53 aa8.87□□□□□ -0.99
PFN1-201ENST00000225655 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
PFN1-201ENST00000225655 C4orf26Q17RF5 130 aa8.86□□□□□ -0.99
PFN1-201ENST00000225655 MT1FP04733 61 aa8.85□□□□□ -0.99
PFN1-201ENST00000225655 USH2AO75445 5202 aa8.84□□□□□ -0.99
PFN1-201ENST00000225655 TRAV7A0A075B6U4 112 aa8.83□□□□□ -1
PFN1-201ENST00000225655 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
PFN1-201ENST00000225655 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
PFN1-201ENST00000225655 KRTAP10-10P60014 251 aa8.8□□□□□ -1
PFN1-201ENST00000225655 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms