RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
SFXN3-201ENST00000224807 LINC00313P59037 77 aa8.57□□□□□ -1.04
SFXN3-201ENST00000224807 SPINK1P00995 79 aa8.55□□□□□ -1.04
SFXN3-201ENST00000224807 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
SFXN3-201ENST00000224807 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
SFXN3-201ENST00000224807 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
SFXN3-201ENST00000224807 FRAS1Q86XX4 4008 aa8.52□□□□□ -1.04
SFXN3-201ENST00000224807 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.05
SFXN3-201ENST00000224807 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
SFXN3-201ENST00000224807 A0A1B0GU69 56 aa8.5□□□□□ -1.05
SFXN3-201ENST00000224807 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
SFXN3-201ENST00000224807 Q6ZR54 194 aa8.5□□□□□ -1.05
SFXN3-201ENST00000224807 WWC2-AS2Q96NR7 200 aa8.49□□□□□ -1.05
SFXN3-201ENST00000224807 ASB16-AS1Q495Z4 193 aa8.48□□□□□ -1.05
SFXN3-201ENST00000224807 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
SFXN3-201ENST00000224807 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
SFXN3-201ENST00000224807 ACYP2P14621 99 aa8.47□□□□□ -1.05
SFXN3-201ENST00000224807 RTL8CO15255 209 aa8.46□□□□□ -1.05
SFXN3-201ENST00000224807 APLNQ9ULZ1 77 aa8.46□□□□□ -1.05
SFXN3-201ENST00000224807 MEGF8Q7Z7M0 2845 aa8.45□□□□□ -1.06
SFXN3-201ENST00000224807 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
SFXN3-201ENST00000224807 SPACA4Q8TDM5 124 aa8.41□□□□□ -1.06
SFXN3-201ENST00000224807 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
SFXN3-201ENST00000224807 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
SFXN3-201ENST00000224807 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.06
SFXN3-201ENST00000224807 ZNF861PO60384 105 aa8.39□□□□□ -1.07
SFXN3-201ENST00000224807 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
SFXN3-201ENST00000224807 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
SFXN3-201ENST00000224807 A0A087WTM6 91 aa8.36□□□□□ -1.07
SFXN3-201ENST00000224807 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
SFXN3-201ENST00000224807 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
SFXN3-201ENST00000224807 Q8N1X5 172 aa8.34□□□□□ -1.07
SFXN3-201ENST00000224807 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
SFXN3-201ENST00000224807 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
SFXN3-201ENST00000224807 UQCR11O14957 56 aa8.29□□□□□ -1.08
SFXN3-201ENST00000224807 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
SFXN3-201ENST00000224807 DNAH8Q96JB1 4490 aa8.28□□□□□ -1.08
SFXN3-201ENST00000224807 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
SFXN3-201ENST00000224807 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
SFXN3-201ENST00000224807 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
SFXN3-201ENST00000224807 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
SFXN3-201ENST00000224807 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
SFXN3-201ENST00000224807 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
SFXN3-201ENST00000224807 KRTAP13-3Q3SY46 172 aa8.24□□□□□ -1.09
SFXN3-201ENST00000224807 KMT2AQ03164 3969 aa8.24□□□□□ -1.09
SFXN3-201ENST00000224807 LY6G6CO95867 125 aa8.24□□□□□ -1.09
SFXN3-201ENST00000224807 H3BS24 57 aa8.23□□□□□ -1.09
SFXN3-201ENST00000224807 NUPR2A6NF83 97 aa8.19□□□□□ -1.1
SFXN3-201ENST00000224807 HECTD4Q9Y4D8 3996 aa8.18□□□□□ -1.1
SFXN3-201ENST00000224807 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
SFXN3-201ENST00000224807 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
SFXN3-201ENST00000224807 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
SFXN3-201ENST00000224807 STARD9Q9P2P6 4700 aa8.18□□□□□ -1.1
SFXN3-201ENST00000224807 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
SFXN3-201ENST00000224807 C1orf134Q5TEV5 83 aa8.14□□□□□ -1.11
SFXN3-201ENST00000224807 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
SFXN3-201ENST00000224807 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
SFXN3-201ENST00000224807 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
SFXN3-201ENST00000224807 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
SFXN3-201ENST00000224807 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
SFXN3-201ENST00000224807 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
SFXN3-201ENST00000224807 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.12
SFXN3-201ENST00000224807 DNAH2Q9P225 4427 aa8.05□□□□□ -1.12
SFXN3-201ENST00000224807 TYMSOSQ8TAI1 123 aa8.04□□□□□ -1.12
SFXN3-201ENST00000224807 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
SFXN3-201ENST00000224807 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
SFXN3-201ENST00000224807 LRP1BQ9NZR2 4599 aa7.98□□□□□ -1.13
SFXN3-201ENST00000224807 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
SFXN3-201ENST00000224807 Q6ZSA8 131 aa7.96□□□□□ -1.14
SFXN3-201ENST00000224807 H0YAA0 97 aa7.95□□□□□ -1.14
SFXN3-201ENST00000224807 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
SFXN3-201ENST00000224807 A0A1B0GU33 70 aa7.91□□□□□ -1.14
SFXN3-201ENST00000224807 A0A0D9SG42 100 aa7.89□□□□□ -1.15
SFXN3-201ENST00000224807 LINC00304Q8N9R0 145 aa7.89□□□□□ -1.15
SFXN3-201ENST00000224807 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
SFXN3-201ENST00000224807 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
SFXN3-201ENST00000224807 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
SFXN3-201ENST00000224807 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
SFXN3-201ENST00000224807 A8MUU9 505 aa7.82□□□□□ -1.16
SFXN3-201ENST00000224807 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
SFXN3-201ENST00000224807 K7ERS5 55 aa7.77□□□□□ -1.16
SFXN3-201ENST00000224807 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
SFXN3-201ENST00000224807 ROMO1P60602 79 aa7.76□□□□□ -1.17
SFXN3-201ENST00000224807 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
SFXN3-201ENST00000224807 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
SFXN3-201ENST00000224807 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
SFXN3-201ENST00000224807 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
SFXN3-201ENST00000224807 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
SFXN3-201ENST00000224807 FAT1Q14517 4588 aa7.69□□□□□ -1.18
SFXN3-201ENST00000224807 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
SFXN3-201ENST00000224807 PKD1P98161 4303 aa7.68□□□□□ -1.18
SFXN3-201ENST00000224807 PKHD1P08F94 4074 aa7.65□□□□□ -1.19
SFXN3-201ENST00000224807 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
SFXN3-201ENST00000224807 P0C880 135 aa7.6□□□□□ -1.19
SFXN3-201ENST00000224807 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
SFXN3-201ENST00000224807 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
SFXN3-201ENST00000224807 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
SFXN3-201ENST00000224807 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
SFXN3-201ENST00000224807 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
SFXN3-201ENST00000224807 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms