RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
LSM5-201ENST00000223084 PRO0461Q9UI25 63 aa6.81□□□□□ -1.32
LSM5-201ENST00000223084 A0A1B0GV90 55 aa6.8□□□□□ -1.32
LSM5-201ENST00000223084 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
LSM5-201ENST00000223084 MTURNQ8N3F0 131 aa6.8□□□□□ -1.32
LSM5-201ENST00000223084 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
LSM5-201ENST00000223084 DEFB116Q30KQ4 102 aa6.78□□□□□ -1.32
LSM5-201ENST00000223084 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
LSM5-201ENST00000223084 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
LSM5-201ENST00000223084 F8W1H4 67 aa6.77□□□□□ -1.33
LSM5-201ENST00000223084 IGKV4-1P06312 121 aa6.76□□□□□ -1.33
LSM5-201ENST00000223084 DSCR10P59022 87 aa6.75□□□□□ -1.33
LSM5-201ENST00000223084 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
LSM5-201ENST00000223084 PDE6GP18545 87 aa6.74□□□□□ -1.33
LSM5-201ENST00000223084 Q6ZQT0 140 aa6.74□□□□□ -1.33
LSM5-201ENST00000223084 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
LSM5-201ENST00000223084 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
LSM5-201ENST00000223084 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
LSM5-201ENST00000223084 C14orf132Q9NPU4 83 aa6.73□□□□□ -1.33
LSM5-201ENST00000223084 Q75L30 129 aa6.72□□□□□ -1.33
LSM5-201ENST00000223084 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.34
LSM5-201ENST00000223084 LINC00313P59037 77 aa6.69□□□□□ -1.34
LSM5-201ENST00000223084 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
LSM5-201ENST00000223084 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
LSM5-201ENST00000223084 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
LSM5-201ENST00000223084 A0A1B0GW54 56 aa6.68□□□□□ -1.34
LSM5-201ENST00000223084 A8MUU9 505 aa6.68□□□□□ -1.34
LSM5-201ENST00000223084 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
LSM5-201ENST00000223084 ETDBQ3ZM63 59 aa6.67□□□□□ -1.34
LSM5-201ENST00000223084 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
LSM5-201ENST00000223084 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
LSM5-201ENST00000223084 J3KT08 172 aa6.63□□□□□ -1.35
LSM5-201ENST00000223084 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
LSM5-201ENST00000223084 NREPQ16612 68 aa6.6□□□□□ -1.35
LSM5-201ENST00000223084 IGKV3D-7A0A0C4DH55 119 aa6.57□□□□□ -1.36
LSM5-201ENST00000223084 A8MWP4 228 aa6.57□□□□□ -1.36
LSM5-201ENST00000223084 NDUFB1O75438 58 aa6.57□□□□□ -1.36
LSM5-201ENST00000223084 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
LSM5-201ENST00000223084 MT1HP80294 61 aa6.56□□□□□ -1.36
LSM5-201ENST00000223084 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
LSM5-201ENST00000223084 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
LSM5-201ENST00000223084 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
LSM5-201ENST00000223084 COX6B2Q6YFQ2 88 aa6.55□□□□□ -1.36
LSM5-201ENST00000223084 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
LSM5-201ENST00000223084 ACYP1P07311 99 aa6.54□□□□□ -1.36
LSM5-201ENST00000223084 PRR15Q8IV56 129 aa6.53□□□□□ -1.36
LSM5-201ENST00000223084 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
LSM5-201ENST00000223084 J3QR89 54 aa6.52□□□□□ -1.37
LSM5-201ENST00000223084 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
LSM5-201ENST00000223084 LINC00846Q9NV44 126 aa6.52□□□□□ -1.37
LSM5-201ENST00000223084 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
LSM5-201ENST00000223084 Q6ZVQ6 151 aa6.51□□□□□ -1.37
LSM5-201ENST00000223084 K7EQZ3 153 aa6.49□□□□□ -1.37
LSM5-201ENST00000223084 BPY2O14599 106 aa6.49□□□□□ -1.37
LSM5-201ENST00000223084 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
LSM5-201ENST00000223084 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
LSM5-201ENST00000223084 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
LSM5-201ENST00000223084 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
LSM5-201ENST00000223084 Q8N9L7 120 aa6.45□□□□□ -1.38
LSM5-201ENST00000223084 K7ERU9 68 aa6.44□□□□□ -1.38
LSM5-201ENST00000223084 M0R2T5 61 aa6.44□□□□□ -1.38
LSM5-201ENST00000223084 HRES1P13985 223 aa6.44□□□□□ -1.38
LSM5-201ENST00000223084 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
LSM5-201ENST00000223084 TMEM254Q8TBM7 123 aa6.44□□□□□ -1.38
LSM5-201ENST00000223084 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
LSM5-201ENST00000223084 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
LSM5-201ENST00000223084 CXCL6P80162 114 aa6.42□□□□□ -1.38
LSM5-201ENST00000223084 ATP5EP2Q5VTU8 51 aa6.42□□□□□ -1.38
LSM5-201ENST00000223084 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
LSM5-201ENST00000223084 SPINK7P58062 85 aa6.4□□□□□ -1.38
LSM5-201ENST00000223084 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
LSM5-201ENST00000223084 MPLKIPQ8TAP9 179 aa6.4□□□□□ -1.38
LSM5-201ENST00000223084 FAM236DA0A1B0GTK5 79 aa6.39□□□□□ -1.39
LSM5-201ENST00000223084 NDUFS5O43920 106 aa6.39□□□□□ -1.39
LSM5-201ENST00000223084 FAM236CP0DP71 79 aa6.39□□□□□ -1.39
LSM5-201ENST00000223084 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
LSM5-201ENST00000223084 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
LSM5-201ENST00000223084 CASC2Q6XLA1 102 aa6.36□□□□□ -1.39
LSM5-201ENST00000223084 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
LSM5-201ENST00000223084 Q5W150 140 aa6.32□□□□□ -1.4
LSM5-201ENST00000223084 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
LSM5-201ENST00000223084 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
LSM5-201ENST00000223084 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
LSM5-201ENST00000223084 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
LSM5-201ENST00000223084 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
LSM5-201ENST00000223084 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
LSM5-201ENST00000223084 IMUPQ9GZP8 106 aa6.24□□□□□ -1.41
LSM5-201ENST00000223084 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
LSM5-201ENST00000223084 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
LSM5-201ENST00000223084 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
LSM5-201ENST00000223084 A0A087WVE0 104 aa6.21□□□□□ -1.42
LSM5-201ENST00000223084 MT2AP02795 61 aa6.16□□□□□ -1.42
LSM5-201ENST00000223084 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
LSM5-201ENST00000223084 C4orf26Q17RF5 130 aa6.15□□□□□ -1.42
LSM5-201ENST00000223084 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
LSM5-201ENST00000223084 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
LSM5-201ENST00000223084 MT1FP04733 61 aa6.12□□□□□ -1.43
LSM5-201ENST00000223084 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
LSM5-201ENST00000223084 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
LSM5-201ENST00000223084 UQCRQO14949 82 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms