RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
RAB3D-201ENST00000222120 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
RAB3D-201ENST00000222120 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
RAB3D-201ENST00000222120 A0A087X002 238 aa8.12□□□□□ -1.11
RAB3D-201ENST00000222120 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
RAB3D-201ENST00000222120 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
RAB3D-201ENST00000222120 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
RAB3D-201ENST00000222120 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
RAB3D-201ENST00000222120 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
RAB3D-201ENST00000222120 A8MU10 97 aa8.1□□□□□ -1.11
RAB3D-201ENST00000222120 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
RAB3D-201ENST00000222120 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
RAB3D-201ENST00000222120 COL7A1Q02388 2944 aa8.09□□□□□ -1.11
RAB3D-201ENST00000222120 Q6ZR54 194 aa8.09□□□□□ -1.11
RAB3D-201ENST00000222120 Q75L30 129 aa8.07□□□□□ -1.12
RAB3D-201ENST00000222120 DMBT1Q9UGM3 2413 aaPredicted RBP8.06□□□□□ -1.12
RAB3D-201ENST00000222120 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
RAB3D-201ENST00000222120 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
RAB3D-201ENST00000222120 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
RAB3D-201ENST00000222120 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
RAB3D-201ENST00000222120 LCE6AA0A183 80 aa8.04□□□□□ -1.12
RAB3D-201ENST00000222120 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
RAB3D-201ENST00000222120 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
RAB3D-201ENST00000222120 SPINK7P58062 85 aa8.01□□□□□ -1.13
RAB3D-201ENST00000222120 LCA10Q71F78 164 aa8□□□□□ -1.13
RAB3D-201ENST00000222120 LINC01558Q9Y6Z2 57 aa8□□□□□ -1.13
RAB3D-201ENST00000222120 HRES1P13985 223 aa7.99□□□□□ -1.13
RAB3D-201ENST00000222120 Q8N1X5 172 aa7.98□□□□□ -1.13
RAB3D-201ENST00000222120 UQCR11O14957 56 aa7.97□□□□□ -1.13
RAB3D-201ENST00000222120 Q5W150 140 aa7.97□□□□□ -1.13
RAB3D-201ENST00000222120 PRAC1Q96KF2 57 aa7.96□□□□□ -1.14
RAB3D-201ENST00000222120 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
RAB3D-201ENST00000222120 K7ERS5 55 aa7.95□□□□□ -1.14
RAB3D-201ENST00000222120 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
RAB3D-201ENST00000222120 MEGF8Q7Z7M0 2845 aa7.92□□□□□ -1.14
RAB3D-201ENST00000222120 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
RAB3D-201ENST00000222120 A6NN06 94 aa7.8□□□□□ -1.16
RAB3D-201ENST00000222120 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
RAB3D-201ENST00000222120 LINC01554Q52M75 96 aa7.77□□□□□ -1.17
RAB3D-201ENST00000222120 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
RAB3D-201ENST00000222120 ANK2Q01484 3957 aa7.7□□□□□ -1.18
RAB3D-201ENST00000222120 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
RAB3D-201ENST00000222120 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
RAB3D-201ENST00000222120 DNAH10Q8IVF4 4471 aa7.67□□□□□ -1.18
RAB3D-201ENST00000222120 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
RAB3D-201ENST00000222120 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
RAB3D-201ENST00000222120 Q6ZSA8 131 aa7.63□□□□□ -1.19
RAB3D-201ENST00000222120 H3BS24 57 aa7.63□□□□□ -1.19
RAB3D-201ENST00000222120 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
RAB3D-201ENST00000222120 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
RAB3D-201ENST00000222120 A0A0D9SG42 100 aa7.55□□□□□ -1.2
RAB3D-201ENST00000222120 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
RAB3D-201ENST00000222120 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
RAB3D-201ENST00000222120 DNAH9Q9NYC9 4486 aa7.54□□□□□ -1.2
RAB3D-201ENST00000222120 A0A1B0GU33 70 aa7.54□□□□□ -1.2
RAB3D-201ENST00000222120 Q5VSD8 79 aa7.52□□□□□ -1.2
RAB3D-201ENST00000222120 LYSTQ99698 3801 aa7.49□□□□□ -1.21
RAB3D-201ENST00000222120 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.21
RAB3D-201ENST00000222120 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
RAB3D-201ENST00000222120 STARD9Q9P2P6 4700 aa7.38□□□□□ -1.23
RAB3D-201ENST00000222120 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
RAB3D-201ENST00000222120 J3QL48 77 aa7.37□□□□□ -1.23
RAB3D-201ENST00000222120 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
RAB3D-201ENST00000222120 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
RAB3D-201ENST00000222120 PRKDCP78527 4128 aaKnown RBP7.35□□□□□ -1.23
RAB3D-201ENST00000222120 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
RAB3D-201ENST00000222120 A8MUU9 505 aa7.33□□□□□ -1.24
RAB3D-201ENST00000222120 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
RAB3D-201ENST00000222120 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
RAB3D-201ENST00000222120 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
RAB3D-201ENST00000222120 C20orf166-AS1Q96NR2 134 aa7.31□□□□□ -1.24
RAB3D-201ENST00000222120 S4R3F8 94 aa7.31□□□□□ -1.24
RAB3D-201ENST00000222120 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
RAB3D-201ENST00000222120 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
RAB3D-201ENST00000222120 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
RAB3D-201ENST00000222120 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
RAB3D-201ENST00000222120 DNAH3Q8TD57 4116 aa7.25□□□□□ -1.25
RAB3D-201ENST00000222120 VPS13DQ5THJ4 4388 aa7.21□□□□□ -1.25
RAB3D-201ENST00000222120 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
RAB3D-201ENST00000222120 ROMO1P60602 79 aa7.19□□□□□ -1.26
RAB3D-201ENST00000222120 A0A1B0GVY2 172 aa7.19□□□□□ -1.26
RAB3D-201ENST00000222120 H0YAA0 97 aa7.15□□□□□ -1.26
RAB3D-201ENST00000222120 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
RAB3D-201ENST00000222120 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
RAB3D-201ENST00000222120 XP32Q5T750 250 aa7.13□□□□□ -1.27
RAB3D-201ENST00000222120 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
RAB3D-201ENST00000222120 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
RAB3D-201ENST00000222120 DNAH17Q9UFH2 4485 aa7.1□□□□□ -1.27
RAB3D-201ENST00000222120 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
RAB3D-201ENST00000222120 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
RAB3D-201ENST00000222120 FAT1Q14517 4588 aa7.06□□□□□ -1.28
RAB3D-201ENST00000222120 R4GN34 69 aa7.04□□□□□ -1.28
RAB3D-201ENST00000222120 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
RAB3D-201ENST00000222120 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
RAB3D-201ENST00000222120 M0QZ58 72 aa7.01□□□□□ -1.29
RAB3D-201ENST00000222120 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
RAB3D-201ENST00000222120 HECTD4Q9Y4D8 3996 aa6.99□□□□□ -1.29
RAB3D-201ENST00000222120 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
RAB3D-201ENST00000222120 P0C880 135 aa6.96□□□□□ -1.3
RAB3D-201ENST00000222120 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms