RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 H3BS24 57 aa7.13□□□□□ -1.27
DNMT3B-201ENST00000201963 ZNF861PO60384 105 aa7.13□□□□□ -1.27
DNMT3B-201ENST00000201963 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
DNMT3B-201ENST00000201963 KRTAP1-5Q9BYS1 174 aa7.12□□□□□ -1.27
DNMT3B-201ENST00000201963 HRES1P13985 223 aa7.12□□□□□ -1.27
DNMT3B-201ENST00000201963 Q96NJ1 140 aa7.11□□□□□ -1.27
DNMT3B-201ENST00000201963 PSORS1C2Q9UIG4 136 aa7.1□□□□□ -1.27
DNMT3B-201ENST00000201963 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
DNMT3B-201ENST00000201963 A8MU10 97 aa7.1□□□□□ -1.27
DNMT3B-201ENST00000201963 J3QL48 77 aa7.08□□□□□ -1.28
DNMT3B-201ENST00000201963 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
DNMT3B-201ENST00000201963 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
DNMT3B-201ENST00000201963 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
DNMT3B-201ENST00000201963 KRTAP29-1A8MX34 341 aaPredicted RBP7.05□□□□□ -1.28
DNMT3B-201ENST00000201963 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
DNMT3B-201ENST00000201963 Q8N1X5 172 aa7.03□□□□□ -1.28
DNMT3B-201ENST00000201963 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
DNMT3B-201ENST00000201963 SPRR1BP22528 89 aa7.01□□□□□ -1.29
DNMT3B-201ENST00000201963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
DNMT3B-201ENST00000201963 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
DNMT3B-201ENST00000201963 KRTAP10-2P60368 255 aa7□□□□□ -1.29
DNMT3B-201ENST00000201963 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
DNMT3B-201ENST00000201963 COL7A1Q02388 2944 aa6.96□□□□□ -1.29
DNMT3B-201ENST00000201963 AKAP9Q99996 3911 aa6.95□□□□□ -1.3
DNMT3B-201ENST00000201963 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
DNMT3B-201ENST00000201963 A6NN06 94 aa6.92□□□□□ -1.3
DNMT3B-201ENST00000201963 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
DNMT3B-201ENST00000201963 Q5W150 140 aa6.92□□□□□ -1.3
DNMT3B-201ENST00000201963 KRTAP10-1P60331 282 aa6.91□□□□□ -1.3
DNMT3B-201ENST00000201963 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
DNMT3B-201ENST00000201963 Q6ZR54 194 aa6.91□□□□□ -1.3
DNMT3B-201ENST00000201963 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
DNMT3B-201ENST00000201963 DNHD1Q96M86 4753 aa6.88□□□□□ -1.31
DNMT3B-201ENST00000201963 A0A087X002 238 aa6.88□□□□□ -1.31
DNMT3B-201ENST00000201963 NOTCH2NLQ7Z3S9 236 aa6.88□□□□□ -1.31
DNMT3B-201ENST00000201963 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
DNMT3B-201ENST00000201963 PANO1I0J062 215 aa6.85□□□□□ -1.31
DNMT3B-201ENST00000201963 A0A0D9SG42 100 aa6.85□□□□□ -1.31
DNMT3B-201ENST00000201963 A0A1B0GU33 70 aa6.85□□□□□ -1.31
DNMT3B-201ENST00000201963 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
DNMT3B-201ENST00000201963 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
DNMT3B-201ENST00000201963 DMAC1Q96GE9 116 aa6.84□□□□□ -1.32
DNMT3B-201ENST00000201963 Q5VSD8 79 aa6.83□□□□□ -1.32
DNMT3B-201ENST00000201963 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
DNMT3B-201ENST00000201963 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
DNMT3B-201ENST00000201963 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
DNMT3B-201ENST00000201963 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
DNMT3B-201ENST00000201963 LINC00483Q53H64 154 aa6.74□□□□□ -1.33
DNMT3B-201ENST00000201963 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
DNMT3B-201ENST00000201963 KRTAP13-1Q8IUC0 172 aa6.63□□□□□ -1.35
DNMT3B-201ENST00000201963 H1FX-AS1Q4G0G2 97 aa6.58□□□□□ -1.36
DNMT3B-201ENST00000201963 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
DNMT3B-201ENST00000201963 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
DNMT3B-201ENST00000201963 ROMO1P60602 79 aa6.54□□□□□ -1.36
DNMT3B-201ENST00000201963 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
DNMT3B-201ENST00000201963 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
DNMT3B-201ENST00000201963 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
DNMT3B-201ENST00000201963 S4R3F8 94 aa6.42□□□□□ -1.38
DNMT3B-201ENST00000201963 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
DNMT3B-201ENST00000201963 A0A1B0GVY2 172 aa6.4□□□□□ -1.38
DNMT3B-201ENST00000201963 PRKDCP78527 4128 aaKnown RBP6.4□□□□□ -1.38
DNMT3B-201ENST00000201963 Q6ZSA8 131 aa6.39□□□□□ -1.39
DNMT3B-201ENST00000201963 A8MUU9 505 aa6.38□□□□□ -1.39
DNMT3B-201ENST00000201963 DNAH9Q9NYC9 4486 aa6.37□□□□□ -1.39
DNMT3B-201ENST00000201963 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
DNMT3B-201ENST00000201963 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
DNMT3B-201ENST00000201963 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
DNMT3B-201ENST00000201963 H0YAA0 97 aa6.32□□□□□ -1.4
DNMT3B-201ENST00000201963 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
DNMT3B-201ENST00000201963 R4GN34 69 aa6.29□□□□□ -1.4
DNMT3B-201ENST00000201963 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
DNMT3B-201ENST00000201963 M0R2T5 61 aa6.25□□□□□ -1.41
DNMT3B-201ENST00000201963 ANK2Q01484 3957 aa6.25□□□□□ -1.41
DNMT3B-201ENST00000201963 M0QZ58 72 aa6.23□□□□□ -1.41
DNMT3B-201ENST00000201963 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
DNMT3B-201ENST00000201963 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
DNMT3B-201ENST00000201963 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
DNMT3B-201ENST00000201963 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
DNMT3B-201ENST00000201963 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
DNMT3B-201ENST00000201963 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
DNMT3B-201ENST00000201963 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
DNMT3B-201ENST00000201963 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
DNMT3B-201ENST00000201963 STARD9Q9P2P6 4700 aa6.14□□□□□ -1.43
DNMT3B-201ENST00000201963 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
DNMT3B-201ENST00000201963 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
DNMT3B-201ENST00000201963 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
DNMT3B-201ENST00000201963 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
DNMT3B-201ENST00000201963 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
DNMT3B-201ENST00000201963 RYR3Q15413 4870 aa5.99□□□□□ -1.45
DNMT3B-201ENST00000201963 P0C880 135 aa5.99□□□□□ -1.45
DNMT3B-201ENST00000201963 DNAH1Q9P2D7 4330 aa5.98□□□□□ -1.45
DNMT3B-201ENST00000201963 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
DNMT3B-201ENST00000201963 FAT1Q14517 4588 aa5.97□□□□□ -1.45
DNMT3B-201ENST00000201963 RYR1P21817 5038 aa5.96□□□□□ -1.46
DNMT3B-201ENST00000201963 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
DNMT3B-201ENST00000201963 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
DNMT3B-201ENST00000201963 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
DNMT3B-201ENST00000201963 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
DNMT3B-201ENST00000201963 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
DNMT3B-201ENST00000201963 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms