RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ASB16-AS1Q495Z4 193 aa11.96□□□□□ -0.49
PPP1R3F-201ENST00000055335 APLNQ9ULZ1 77 aa11.96□□□□□ -0.49
PPP1R3F-201ENST00000055335 PSORS1C2Q9UIG4 136 aa11.95□□□□□ -0.5
PPP1R3F-201ENST00000055335 WWC2-AS2Q96NR7 200 aa11.95□□□□□ -0.5
PPP1R3F-201ENST00000055335 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
PPP1R3F-201ENST00000055335 DNAH7Q8WXX0 4024 aa11.93□□□□□ -0.5
PPP1R3F-201ENST00000055335 PLAC8Q9NZF1 115 aa11.92□□□□□ -0.5
PPP1R3F-201ENST00000055335 TGP01266 2768 aa11.89□□□□□ -0.51
PPP1R3F-201ENST00000055335 ZNF706Q9Y5V0 76 aaPredicted RBP11.89□□□□□ -0.51
PPP1R3F-201ENST00000055335 ADM2Q7Z4H4 148 aa11.88□□□□□ -0.51
PPP1R3F-201ENST00000055335 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
PPP1R3F-201ENST00000055335 ACYP2P14621 99 aa11.88□□□□□ -0.51
PPP1R3F-201ENST00000055335 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
PPP1R3F-201ENST00000055335 LINC00313P59037 77 aa11.86□□□□□ -0.51
PPP1R3F-201ENST00000055335 A0A1B0GU69 56 aa11.83□□□□□ -0.52
PPP1R3F-201ENST00000055335 LINC00483Q53H64 154 aa11.82□□□□□ -0.52
PPP1R3F-201ENST00000055335 DNAH3Q8TD57 4116 aa11.81□□□□□ -0.52
PPP1R3F-201ENST00000055335 ZNF861PO60384 105 aa11.81□□□□□ -0.52
PPP1R3F-201ENST00000055335 IGLV5-52A0A0A0MRZ9 124 aa11.8□□□□□ -0.52
PPP1R3F-201ENST00000055335 RTL8CO15255 209 aa11.79□□□□□ -0.52
PPP1R3F-201ENST00000055335 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
PPP1R3F-201ENST00000055335 Q6ZRN7 208 aaPredicted RBP11.77□□□□□ -0.52
PPP1R3F-201ENST00000055335 FBN3Q75N90 2809 aa11.77□□□□□ -0.53
PPP1R3F-201ENST00000055335 A0A087WTM6 91 aa11.76□□□□□ -0.53
PPP1R3F-201ENST00000055335 IGKV2D-30A0A075B6S6 120 aa11.73□□□□□ -0.53
PPP1R3F-201ENST00000055335 IGKV2-30P06310 120 aa11.73□□□□□ -0.53
PPP1R3F-201ENST00000055335 SPINK1P00995 79 aa11.69□□□□□ -0.54
PPP1R3F-201ENST00000055335 DNAH8Q96JB1 4490 aa11.68□□□□□ -0.54
PPP1R3F-201ENST00000055335 KRTAP13-3Q3SY46 172 aa11.67□□□□□ -0.54
PPP1R3F-201ENST00000055335 MEGF8Q7Z7M0 2845 aa11.66□□□□□ -0.54
PPP1R3F-201ENST00000055335 DMAC1Q96GE9 116 aa11.65□□□□□ -0.54
PPP1R3F-201ENST00000055335 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
PPP1R3F-201ENST00000055335 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
PPP1R3F-201ENST00000055335 IGLV7-43P04211 117 aa11.62□□□□□ -0.55
PPP1R3F-201ENST00000055335 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
PPP1R3F-201ENST00000055335 NUPR2A6NF83 97 aa11.6□□□□□ -0.55
PPP1R3F-201ENST00000055335 UQCR11O14957 56 aa11.59□□□□□ -0.55
PPP1R3F-201ENST00000055335 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
PPP1R3F-201ENST00000055335 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
PPP1R3F-201ENST00000055335 SPATA8Q6RVD6 105 aa11.51□□□□□ -0.57
PPP1R3F-201ENST00000055335 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
PPP1R3F-201ENST00000055335 PLA2G1BP04054 148 aaKnown RBP11.5□□□□□ -0.57
PPP1R3F-201ENST00000055335 STARD9Q9P2P6 4700 aa11.5□□□□□ -0.57
PPP1R3F-201ENST00000055335 HECTD4Q9Y4D8 3996 aa11.49□□□□□ -0.57
PPP1R3F-201ENST00000055335 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
PPP1R3F-201ENST00000055335 Q8N1X5 172 aa11.48□□□□□ -0.57
PPP1R3F-201ENST00000055335 CSAG1Q6PB30 78 aa11.47□□□□□ -0.57
PPP1R3F-201ENST00000055335 FLG2Q5D862 2391 aaPredicted RBP11.45□□□□□ -0.58
PPP1R3F-201ENST00000055335 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
PPP1R3F-201ENST00000055335 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
PPP1R3F-201ENST00000055335 LY6G6CO95867 125 aa11.41□□□□□ -0.58
PPP1R3F-201ENST00000055335 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
PPP1R3F-201ENST00000055335 DNAH2Q9P225 4427 aa11.35□□□□□ -0.59
PPP1R3F-201ENST00000055335 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
PPP1R3F-201ENST00000055335 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
PPP1R3F-201ENST00000055335 DNAH6Q9C0G6 4158 aa11.32□□□□□ -0.6
PPP1R3F-201ENST00000055335 KRTAP16-1A8MUX0 517 aa11.3□□□□□ -0.6
PPP1R3F-201ENST00000055335 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
PPP1R3F-201ENST00000055335 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
PPP1R3F-201ENST00000055335 DYNC2H1Q8NCM8 4307 aaKnown RBP11.27□□□□□ -0.61
PPP1R3F-201ENST00000055335 H3BS24 57 aa11.22□□□□□ -0.61
PPP1R3F-201ENST00000055335 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
PPP1R3F-201ENST00000055335 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
PPP1R3F-201ENST00000055335 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
PPP1R3F-201ENST00000055335 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
PPP1R3F-201ENST00000055335 CRIPTQ9P021 101 aa11.17□□□□□ -0.62
PPP1R3F-201ENST00000055335 C9orf92A6NGG3 77 aa11.14□□□□□ -0.63
PPP1R3F-201ENST00000055335 KRTAP10-1P60331 282 aa11.14□□□□□ -0.63
PPP1R3F-201ENST00000055335 Q6ZSA8 131 aa11.11□□□□□ -0.63
PPP1R3F-201ENST00000055335 H0YAA0 97 aa11.09□□□□□ -0.63
PPP1R3F-201ENST00000055335 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
PPP1R3F-201ENST00000055335 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
PPP1R3F-201ENST00000055335 A0A1B0GU33 70 aa11.03□□□□□ -0.64
PPP1R3F-201ENST00000055335 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
PPP1R3F-201ENST00000055335 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
PPP1R3F-201ENST00000055335 A8MUU9 505 aa10.97□□□□□ -0.65
PPP1R3F-201ENST00000055335 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
PPP1R3F-201ENST00000055335 KRTAP25-1Q3LHN0 102 aa10.92□□□□□ -0.66
PPP1R3F-201ENST00000055335 H1FX-AS1Q4G0G2 97 aa10.89□□□□□ -0.67
PPP1R3F-201ENST00000055335 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
PPP1R3F-201ENST00000055335 K7ERS5 55 aa10.84□□□□□ -0.67
PPP1R3F-201ENST00000055335 FAT2Q9NYQ8 4349 aa10.82□□□□□ -0.68
PPP1R3F-201ENST00000055335 HYDINQ4G0P3 5121 aa10.79□□□□□ -0.68
PPP1R3F-201ENST00000055335 ROMO1P60602 79 aa10.78□□□□□ -0.68
PPP1R3F-201ENST00000055335 A0A0D9SG42 100 aa10.78□□□□□ -0.68
PPP1R3F-201ENST00000055335 COX6B2Q6YFQ2 88 aa10.74□□□□□ -0.69
PPP1R3F-201ENST00000055335 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
PPP1R3F-201ENST00000055335 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
PPP1R3F-201ENST00000055335 PKD1P98161 4303 aa10.65□□□□□ -0.7
PPP1R3F-201ENST00000055335 C20orf166-AS1Q96NR2 134 aa10.64□□□□□ -0.71
PPP1R3F-201ENST00000055335 FAT1Q14517 4588 aa10.63□□□□□ -0.71
PPP1R3F-201ENST00000055335 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
PPP1R3F-201ENST00000055335 RPL37P61927 97 aaKnown RBP10.52□□□□□ -0.73
PPP1R3F-201ENST00000055335 C10orf95Q9H7T3 257 aa10.51□□□□□ -0.73
PPP1R3F-201ENST00000055335 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
PPP1R3F-201ENST00000055335 P0C880 135 aa10.5□□□□□ -0.73
PPP1R3F-201ENST00000055335 KRTAP13-4Q3LI77 160 aa10.47□□□□□ -0.73
PPP1R3F-201ENST00000055335 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
PPP1R3F-201ENST00000055335 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
PPP1R3F-201ENST00000055335 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms