RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 A0A087WTM6 91 aa7.55□□□□□ -1.2
TSPAN9-201ENST00000011898 ZNF861PO60384 105 aa7.55□□□□□ -1.2
TSPAN9-201ENST00000011898 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
TSPAN9-201ENST00000011898 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
TSPAN9-201ENST00000011898 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
TSPAN9-201ENST00000011898 PSORS1C2Q9UIG4 136 aa7.52□□□□□ -1.21
TSPAN9-201ENST00000011898 Q8N1X5 172 aa7.5□□□□□ -1.21
TSPAN9-201ENST00000011898 Q96NJ1 140 aa7.5□□□□□ -1.21
TSPAN9-201ENST00000011898 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
TSPAN9-201ENST00000011898 ANK2Q01484 3957 aa7.49□□□□□ -1.21
TSPAN9-201ENST00000011898 A0A0D9SG42 100 aa7.49□□□□□ -1.21
TSPAN9-201ENST00000011898 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
TSPAN9-201ENST00000011898 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
TSPAN9-201ENST00000011898 TYMSOSQ8TAI1 123 aa7.46□□□□□ -1.21
TSPAN9-201ENST00000011898 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
TSPAN9-201ENST00000011898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
TSPAN9-201ENST00000011898 A0A1B0GU33 70 aa7.43□□□□□ -1.22
TSPAN9-201ENST00000011898 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
TSPAN9-201ENST00000011898 TNP2Q05952 138 aa7.43□□□□□ -1.22
TSPAN9-201ENST00000011898 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
TSPAN9-201ENST00000011898 KRTAP4-16G5E9R7 235 aaPredicted RBP7.4□□□□□ -1.22
TSPAN9-201ENST00000011898 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
TSPAN9-201ENST00000011898 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
TSPAN9-201ENST00000011898 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
TSPAN9-201ENST00000011898 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
TSPAN9-201ENST00000011898 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
TSPAN9-201ENST00000011898 SPRR1BP22528 89 aa7.36□□□□□ -1.23
TSPAN9-201ENST00000011898 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
TSPAN9-201ENST00000011898 DNAH3Q8TD57 4116 aa7.34□□□□□ -1.23
TSPAN9-201ENST00000011898 KRTAP29-1A8MX34 341 aaPredicted RBP7.33□□□□□ -1.24
TSPAN9-201ENST00000011898 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
TSPAN9-201ENST00000011898 LCE6AA0A183 80 aa7.32□□□□□ -1.24
TSPAN9-201ENST00000011898 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
TSPAN9-201ENST00000011898 DNHD1Q96M86 4753 aa7.29□□□□□ -1.24
TSPAN9-201ENST00000011898 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
TSPAN9-201ENST00000011898 A0A0A0MQY5 61 aa7.27□□□□□ -1.25
TSPAN9-201ENST00000011898 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
TSPAN9-201ENST00000011898 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
TSPAN9-201ENST00000011898 Q5W150 140 aa7.26□□□□□ -1.25
TSPAN9-201ENST00000011898 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
TSPAN9-201ENST00000011898 PANO1I0J062 215 aa7.25□□□□□ -1.25
TSPAN9-201ENST00000011898 Q6ZR54 194 aa7.25□□□□□ -1.25
TSPAN9-201ENST00000011898 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
TSPAN9-201ENST00000011898 DNAH9Q9NYC9 4486 aa7.24□□□□□ -1.25
TSPAN9-201ENST00000011898 ROMO1P60602 79 aa7.24□□□□□ -1.25
TSPAN9-201ENST00000011898 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
TSPAN9-201ENST00000011898 C9orf92A6NGG3 77 aa7.22□□□□□ -1.25
TSPAN9-201ENST00000011898 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
TSPAN9-201ENST00000011898 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
TSPAN9-201ENST00000011898 FBN3Q75N90 2809 aa7.2□□□□□ -1.26
TSPAN9-201ENST00000011898 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
TSPAN9-201ENST00000011898 TGP01266 2768 aa7.19□□□□□ -1.26
TSPAN9-201ENST00000011898 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
TSPAN9-201ENST00000011898 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
TSPAN9-201ENST00000011898 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
TSPAN9-201ENST00000011898 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
TSPAN9-201ENST00000011898 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
TSPAN9-201ENST00000011898 A0A087X002 238 aa7.1□□□□□ -1.27
TSPAN9-201ENST00000011898 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
TSPAN9-201ENST00000011898 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
TSPAN9-201ENST00000011898 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
TSPAN9-201ENST00000011898 Q5VSD8 79 aa7.07□□□□□ -1.28
TSPAN9-201ENST00000011898 COL7A1Q02388 2944 aa7.07□□□□□ -1.28
TSPAN9-201ENST00000011898 A8MUU9 505 aa7.05□□□□□ -1.28
TSPAN9-201ENST00000011898 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
TSPAN9-201ENST00000011898 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
TSPAN9-201ENST00000011898 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
TSPAN9-201ENST00000011898 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.3
TSPAN9-201ENST00000011898 DYNC2H1Q8NCM8 4307 aaKnown RBP6.96□□□□□ -1.3
TSPAN9-201ENST00000011898 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
TSPAN9-201ENST00000011898 DNAH7Q8WXX0 4024 aa6.91□□□□□ -1.3
TSPAN9-201ENST00000011898 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
TSPAN9-201ENST00000011898 M0R2T5 61 aa6.9□□□□□ -1.3
TSPAN9-201ENST00000011898 VPS13DQ5THJ4 4388 aa6.89□□□□□ -1.31
TSPAN9-201ENST00000011898 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
TSPAN9-201ENST00000011898 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
TSPAN9-201ENST00000011898 Q6ZSA8 131 aa6.83□□□□□ -1.32
TSPAN9-201ENST00000011898 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
TSPAN9-201ENST00000011898 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
TSPAN9-201ENST00000011898 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
TSPAN9-201ENST00000011898 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
TSPAN9-201ENST00000011898 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
TSPAN9-201ENST00000011898 S4R3F8 94 aa6.78□□□□□ -1.32
TSPAN9-201ENST00000011898 R4GN34 69 aa6.74□□□□□ -1.33
TSPAN9-201ENST00000011898 H0YAA0 97 aa6.71□□□□□ -1.34
TSPAN9-201ENST00000011898 DNAH17Q9UFH2 4485 aa6.67□□□□□ -1.34
TSPAN9-201ENST00000011898 LYSTQ99698 3801 aa6.66□□□□□ -1.34
TSPAN9-201ENST00000011898 M0QZ58 72 aa6.66□□□□□ -1.34
TSPAN9-201ENST00000011898 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
TSPAN9-201ENST00000011898 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
TSPAN9-201ENST00000011898 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
TSPAN9-201ENST00000011898 SACSQ9NZJ4 4579 aa6.64□□□□□ -1.35
TSPAN9-201ENST00000011898 DNAH2Q9P225 4427 aa6.64□□□□□ -1.35
TSPAN9-201ENST00000011898 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
TSPAN9-201ENST00000011898 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
TSPAN9-201ENST00000011898 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
TSPAN9-201ENST00000011898 RYR2Q92736 4967 aa6.59□□□□□ -1.35
TSPAN9-201ENST00000011898 HYDINQ4G0P3 5121 aa6.57□□□□□ -1.36
TSPAN9-201ENST00000011898 P0C880 135 aa6.55□□□□□ -1.36
TSPAN9-201ENST00000011898 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms