RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 BCE1O60756 84 aa10.52□□□□□ -0.73
PHGDH-229ENST00000641891 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
PHGDH-229ENST00000641891 UBE2AP49459 152 aa10.51□□□□□ -0.73
PHGDH-229ENST00000641891 C20orf197Q8N268 126 aa10.51□□□□□ -0.73
PHGDH-229ENST00000641891 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
PHGDH-229ENST00000641891 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
PHGDH-229ENST00000641891 H0Y9J4 135 aa10.49□□□□□ -0.73
PHGDH-229ENST00000641891 Q6ZR54 194 aa10.48□□□□□ -0.73
PHGDH-229ENST00000641891 SMIM20Q8N5G0 67 aa10.48□□□□□ -0.73
PHGDH-229ENST00000641891 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
PHGDH-229ENST00000641891 IGLV8-61A0A075B6I0 122 aa10.47□□□□□ -0.73
PHGDH-229ENST00000641891 RTL8CO15255 209 aa10.46□□□□□ -0.74
PHGDH-229ENST00000641891 DNAH2Q9P225 4427 aa10.46□□□□□ -0.74
PHGDH-229ENST00000641891 KRTAP13-1Q8IUC0 172 aa10.45□□□□□ -0.74
PHGDH-229ENST00000641891 SPRR1BP22528 89 aa10.44□□□□□ -0.74
PHGDH-229ENST00000641891 DSCR10P59022 87 aa10.44□□□□□ -0.74
PHGDH-229ENST00000641891 HECTD4Q9Y4D8 3996 aa10.44□□□□□ -0.74
PHGDH-229ENST00000641891 A0A087WSZ3 146 aa10.42□□□□□ -0.74
PHGDH-229ENST00000641891 TMEM258P61165 79 aa10.42□□□□□ -0.74
PHGDH-229ENST00000641891 DEFB116Q30KQ4 102 aa10.42□□□□□ -0.74
PHGDH-229ENST00000641891 SNURFQ9Y675 71 aa10.42□□□□□ -0.74
PHGDH-229ENST00000641891 K7EQZ3 153 aa10.41□□□□□ -0.74
PHGDH-229ENST00000641891 FBN3Q75N90 2809 aa10.38□□□□□ -0.75
PHGDH-229ENST00000641891 LY6G6CO95867 125 aa10.38□□□□□ -0.75
PHGDH-229ENST00000641891 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
PHGDH-229ENST00000641891 DNAH17Q9UFH2 4485 aa10.38□□□□□ -0.75
PHGDH-229ENST00000641891 C1orf134Q5TEV5 83 aa10.38□□□□□ -0.75
PHGDH-229ENST00000641891 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
PHGDH-229ENST00000641891 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
PHGDH-229ENST00000641891 H7BZZ5 65 aa10.35□□□□□ -0.75
PHGDH-229ENST00000641891 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
PHGDH-229ENST00000641891 FAM30AQ9NZY2 134 aa10.33□□□□□ -0.76
PHGDH-229ENST00000641891 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
PHGDH-229ENST00000641891 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
PHGDH-229ENST00000641891 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
PHGDH-229ENST00000641891 TMEM254Q8TBM7 123 aa10.31□□□□□ -0.76
PHGDH-229ENST00000641891 DNAH8Q96JB1 4490 aa10.3□□□□□ -0.76
PHGDH-229ENST00000641891 TGP01266 2768 aa10.3□□□□□ -0.76
PHGDH-229ENST00000641891 J3KT08 172 aa10.3□□□□□ -0.76
PHGDH-229ENST00000641891 FRAS1Q86XX4 4008 aa10.29□□□□□ -0.76
PHGDH-229ENST00000641891 HCG22E2RYF7 251 aa10.28□□□□□ -0.76
PHGDH-229ENST00000641891 FAM236DA0A1B0GTK5 79 aa10.27□□□□□ -0.77
PHGDH-229ENST00000641891 OXTP01178 125 aa10.27□□□□□ -0.77
PHGDH-229ENST00000641891 FAM236CP0DP71 79 aa10.27□□□□□ -0.77
PHGDH-229ENST00000641891 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
PHGDH-229ENST00000641891 ANAPC11Q9NYG5 84 aa10.26□□□□□ -0.77
PHGDH-229ENST00000641891 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
PHGDH-229ENST00000641891 RPS28P62857 69 aaKnown RBP10.25□□□□□ -0.77
PHGDH-229ENST00000641891 LINC00472Q9H8W2 130 aa10.25□□□□□ -0.77
PHGDH-229ENST00000641891 WFDC13Q8IUB5 93 aa10.24□□□□□ -0.77
PHGDH-229ENST00000641891 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
PHGDH-229ENST00000641891 ZNF861PO60384 105 aa10.22□□□□□ -0.77
PHGDH-229ENST00000641891 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
PHGDH-229ENST00000641891 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.77
PHGDH-229ENST00000641891 WWC2-AS2Q96NR7 200 aa10.21□□□□□ -0.77
PHGDH-229ENST00000641891 ZNF706Q9Y5V0 76 aaPredicted RBP10.21□□□□□ -0.78
PHGDH-229ENST00000641891 NDUFC1O43677 76 aa10.19□□□□□ -0.78
PHGDH-229ENST00000641891 MOBPQ13875 183 aa10.19□□□□□ -0.78
PHGDH-229ENST00000641891 LCE6AA0A183 80 aa10.18□□□□□ -0.78
PHGDH-229ENST00000641891 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
PHGDH-229ENST00000641891 A8MWP4 228 aa10.18□□□□□ -0.78
PHGDH-229ENST00000641891 DNAH5Q8TE73 4624 aa10.18□□□□□ -0.78
PHGDH-229ENST00000641891 DNAH11Q96DT5 4516 aa10.16□□□□□ -0.78
PHGDH-229ENST00000641891 KRTAP29-1A8MX34 341 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-229ENST00000641891 IGLV7-43P04211 117 aa10.15□□□□□ -0.78
PHGDH-229ENST00000641891 CIRBP-AS1Q8TBR5 109 aa10.15□□□□□ -0.78
PHGDH-229ENST00000641891 Q96NJ1 140 aa10.15□□□□□ -0.78
PHGDH-229ENST00000641891 HYDINQ4G0P3 5121 aa10.15□□□□□ -0.78
PHGDH-229ENST00000641891 ALMS1Q8TCU4 4167 aa10.14□□□□□ -0.79
PHGDH-229ENST00000641891 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
PHGDH-229ENST00000641891 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
PHGDH-229ENST00000641891 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
PHGDH-229ENST00000641891 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
PHGDH-229ENST00000641891 C5orf47Q569G3 176 aa10.09□□□□□ -0.79
PHGDH-229ENST00000641891 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
PHGDH-229ENST00000641891 PKD1P98161 4303 aa10.08□□□□□ -0.8
PHGDH-229ENST00000641891 KRTAP21-3Q3LHN1 58 aa10.07□□□□□ -0.8
PHGDH-229ENST00000641891 FAT2Q9NYQ8 4349 aa10.07□□□□□ -0.8
PHGDH-229ENST00000641891 ATP5EP56381 51 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-229ENST00000641891 NDUFB1O75438 58 aa10.05□□□□□ -0.8
PHGDH-229ENST00000641891 Q6ZSA8 131 aa10.04□□□□□ -0.8
PHGDH-229ENST00000641891 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
PHGDH-229ENST00000641891 Q5XG85 94 aa10.01□□□□□ -0.81
PHGDH-229ENST00000641891 IGHV6-1A0A0B4J1U7 121 aa9.99□□□□□ -0.81
PHGDH-229ENST00000641891 H0Y9P7 68 aa9.99□□□□□ -0.81
PHGDH-229ENST00000641891 MP68P56378 58 aa9.99□□□□□ -0.81
PHGDH-229ENST00000641891 LINC00208Q96KT6 92 aa9.99□□□□□ -0.81
PHGDH-229ENST00000641891 C8orf17Q9NRJ1 99 aa9.98□□□□□ -0.81
PHGDH-229ENST00000641891 LRP1BQ9NZR2 4599 aa9.98□□□□□ -0.81
PHGDH-229ENST00000641891 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
PHGDH-229ENST00000641891 C4orf26Q17RF5 130 aa9.96□□□□□ -0.82
PHGDH-229ENST00000641891 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
PHGDH-229ENST00000641891 A0A087X002 238 aa9.95□□□□□ -0.82
PHGDH-229ENST00000641891 NOTCH2NLQ7Z3S9 236 aa9.95□□□□□ -0.82
PHGDH-229ENST00000641891 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
PHGDH-229ENST00000641891 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
PHGDH-229ENST00000641891 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
PHGDH-229ENST00000641891 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
PHGDH-229ENST00000641891 PRR4Q16378 134 aa9.94□□□□□ -0.82
PHGDH-229ENST00000641891 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms