RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ARL17AQ8IVW1 177 aa5.06□□□□□ -1.6
SCARB2-220ENST00000640076 FXYD2P54710 66 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 BVES-AS1Q5T3Y7 98 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 A0A096LNI7 61 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 C16orf90A8MZG2 172 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 TCL1BO95988 128 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 C9orf129Q5T035 196 aaKnown RBP5.05□□□□□ -1.6
SCARB2-220ENST00000640076 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
SCARB2-220ENST00000640076 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
SCARB2-220ENST00000640076 C7orf65Q6ZTY9 151 aa5.04□□□□□ -1.6
SCARB2-220ENST00000640076 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
SCARB2-220ENST00000640076 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
SCARB2-220ENST00000640076 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
SCARB2-220ENST00000640076 Q8NDZ9 215 aa5.04□□□□□ -1.6
SCARB2-220ENST00000640076 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
SCARB2-220ENST00000640076 PANO1I0J062 215 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 FAM168BA1KXE4 195 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 CFC1BP0CG36 223 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 CFC1P0CG37 223 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 LINC00474Q9P2X8 69 aa5.02□□□□□ -1.61
SCARB2-220ENST00000640076 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
SCARB2-220ENST00000640076 ETDBQ3ZM63 59 aa5.01□□□□□ -1.61
SCARB2-220ENST00000640076 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
SCARB2-220ENST00000640076 Q8N377 158 aa5.01□□□□□ -1.61
SCARB2-220ENST00000640076 SPACA4Q8TDM5 124 aa5.01□□□□□ -1.61
SCARB2-220ENST00000640076 NHP2Q9NX24 153 aaKnown RBP5.01□□□□□ -1.61
SCARB2-220ENST00000640076 KRTAP10-1P60331 282 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 PPDPFLQ8WWR9 84 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 LRP1BQ9NZR2 4599 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 A0A0B4J2C4 111 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 A0A1W2PNN7 141 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 NCR3O14931 201 aa5□□□□□ -1.61
SCARB2-220ENST00000640076 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
SCARB2-220ENST00000640076 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
SCARB2-220ENST00000640076 H3BUT2 72 aa4.99□□□□□ -1.61
SCARB2-220ENST00000640076 TRAV13-2A0A0B4J235 113 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 Q6ZSA8 131 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 A0A087WYN8 130 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 hADV29S1A0JD25 119 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 UBE2AP49459 152 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
SCARB2-220ENST00000640076 TRBV7-7A0A0K0K1E9 115 aa4.97□□□□□ -1.61
SCARB2-220ENST00000640076 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
SCARB2-220ENST00000640076 IGLV6-57P01721 117 aa4.96□□□□□ -1.61
SCARB2-220ENST00000640076 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.61
SCARB2-220ENST00000640076 TRBV10-3A0A0K0K1G6 114 aa4.96□□□□□ -1.62
SCARB2-220ENST00000640076 LINC00167Q96N53 147 aa4.96□□□□□ -1.62
SCARB2-220ENST00000640076 A0A1B0GW54 56 aa4.95□□□□□ -1.62
SCARB2-220ENST00000640076 H7C2G1 150 aa4.95□□□□□ -1.62
SCARB2-220ENST00000640076 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
SCARB2-220ENST00000640076 CIRBP-AS1Q8TBR5 109 aa4.95□□□□□ -1.62
SCARB2-220ENST00000640076 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
SCARB2-220ENST00000640076 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
SCARB2-220ENST00000640076 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
SCARB2-220ENST00000640076 ATOX1O00244 68 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 Q1RN00 199 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 RPL28P46779 137 aaKnown RBP4.93□□□□□ -1.62
SCARB2-220ENST00000640076 HAMPP81172 84 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
SCARB2-220ENST00000640076 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
SCARB2-220ENST00000640076 CLEC2BQ92478 149 aa4.91□□□□□ -1.62
SCARB2-220ENST00000640076 SPRR1AP35321 89 aa4.91□□□□□ -1.62
SCARB2-220ENST00000640076 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
SCARB2-220ENST00000640076 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
SCARB2-220ENST00000640076 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
SCARB2-220ENST00000640076 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
SCARB2-220ENST00000640076 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
SCARB2-220ENST00000640076 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
SCARB2-220ENST00000640076 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
SCARB2-220ENST00000640076 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
SCARB2-220ENST00000640076 A6NN06 94 aa4.89□□□□□ -1.63
SCARB2-220ENST00000640076 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
SCARB2-220ENST00000640076 COX6CP09669 75 aa4.88□□□□□ -1.63
SCARB2-220ENST00000640076 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
SCARB2-220ENST00000640076 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
SCARB2-220ENST00000640076 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 HSPG2P98160 4391 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 ETDCA0A1B0GVM5 59 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 H0YGX0 51 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 BCE1O60756 84 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 COX7BP24311 80 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
SCARB2-220ENST00000640076 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
SCARB2-220ENST00000640076 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
SCARB2-220ENST00000640076 FAT1Q14517 4588 aa4.86□□□□□ -1.63
SCARB2-220ENST00000640076 CCKP06307 115 aa4.86□□□□□ -1.63
SCARB2-220ENST00000640076 Q6ZRX8 168 aa4.86□□□□□ -1.63
SCARB2-220ENST00000640076 RYR1P21817 5038 aa4.86□□□□□ -1.63
SCARB2-220ENST00000640076 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
SCARB2-220ENST00000640076 KIAA1109Q2LD37 5005 aa4.85□□□□□ -1.63
SCARB2-220ENST00000640076 PRLHP81277 87 aa4.85□□□□□ -1.63
SCARB2-220ENST00000640076 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
SCARB2-220ENST00000640076 LINC00575Q6W349 94 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms