RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 KMT2CQ8NEZ4 4911 aaKnown RBP13.26□□□□□ -0.29
SCARB2-212ENST00000638663 A0A1B0GVY2 172 aa13.23□□□□□ -0.29
SCARB2-212ENST00000638663 F8WEM9 126 aa13.23□□□□□ -0.29
SCARB2-212ENST00000638663 ZNF861PO60384 105 aa13.23□□□□□ -0.29
SCARB2-212ENST00000638663 SPRR1BP22528 89 aa13.23□□□□□ -0.29
SCARB2-212ENST00000638663 LINC00643Q86TS7 51 aa13.21□□□□□ -0.29
SCARB2-212ENST00000638663 IGLV7-43P04211 117 aa13.2□□□□□ -0.3
SCARB2-212ENST00000638663 SPRR4Q96PI1 79 aa13.18□□□□□ -0.3
SCARB2-212ENST00000638663 PKHD1P08F94 4074 aa13.17□□□□□ -0.3
SCARB2-212ENST00000638663 C21orf62-AS1Q17RA5 79 aa13.17□□□□□ -0.3
SCARB2-212ENST00000638663 A0A0G2JQZ4 141 aa13.15□□□□□ -0.3
SCARB2-212ENST00000638663 A0A1W2PNM2 257 aa13.15□□□□□ -0.3
SCARB2-212ENST00000638663 UBL5Q9BZL1 73 aa13.15□□□□□ -0.3
SCARB2-212ENST00000638663 LRP1BQ9NZR2 4599 aa13.15□□□□□ -0.3
SCARB2-212ENST00000638663 ZNF706Q9Y5V0 76 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-212ENST00000638663 IGLV8-61A0A075B6I0 122 aa13.13□□□□□ -0.31
SCARB2-212ENST00000638663 IGFL1Q6UW32 110 aa13.13□□□□□ -0.31
SCARB2-212ENST00000638663 LINC00483Q53H64 154 aa13.11□□□□□ -0.31
SCARB2-212ENST00000638663 Q8NBF4 154 aa13.11□□□□□ -0.31
SCARB2-212ENST00000638663 DYNC1H1Q14204 4646 aaKnown RBP13.1□□□□□ -0.31
SCARB2-212ENST00000638663 IGKV3D-7A0A0C4DH55 119 aa13.09□□□□□ -0.31
SCARB2-212ENST00000638663 Q6JHZ5 121 aa13.09□□□□□ -0.31
SCARB2-212ENST00000638663 Q6ZVQ6 151 aa13.09□□□□□ -0.31
SCARB2-212ENST00000638663 ANAPC11Q9NYG5 84 aa13.08□□□□□ -0.32
SCARB2-212ENST00000638663 TRBV7-7A0A0K0K1E9 115 aa13.07□□□□□ -0.32
SCARB2-212ENST00000638663 IGLV9-49A0A0B4J1Y8 123 aa13.06□□□□□ -0.32
SCARB2-212ENST00000638663 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
SCARB2-212ENST00000638663 Q6Q795 121 aa13.03□□□□□ -0.32
SCARB2-212ENST00000638663 A0A1B0GW54 56 aa13.02□□□□□ -0.32
SCARB2-212ENST00000638663 SCGB1A1P11684 91 aa13.02□□□□□ -0.32
SCARB2-212ENST00000638663 CRYGAP11844 174 aa13.02□□□□□ -0.32
SCARB2-212ENST00000638663 PCP4P48539 62 aa13.01□□□□□ -0.33
SCARB2-212ENST00000638663 IMUPQ9GZP8 106 aa13.01□□□□□ -0.33
SCARB2-212ENST00000638663 NREPQ16612 68 aa13□□□□□ -0.33
SCARB2-212ENST00000638663 ATP5EP2Q5VTU8 51 aa13□□□□□ -0.33
SCARB2-212ENST00000638663 RYR3Q15413 4870 aa12.98□□□□□ -0.33
SCARB2-212ENST00000638663 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-212ENST00000638663 MOBPQ13875 183 aa12.96□□□□□ -0.33
SCARB2-212ENST00000638663 A0A087WSZ3 146 aa12.94□□□□□ -0.34
SCARB2-212ENST00000638663 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
SCARB2-212ENST00000638663 VPS13BQ7Z7G8 4022 aa12.94□□□□□ -0.34
SCARB2-212ENST00000638663 HIST1H4AP62805 103 aaKnown RBP12.92□□□□□ -0.34
SCARB2-212ENST00000638663 APOBP04114 4563 aaKnown RBP12.92□□□□□ -0.34
SCARB2-212ENST00000638663 CXCL6P80162 114 aa12.92□□□□□ -0.34
SCARB2-212ENST00000638663 A0A087WVE0 104 aa12.9□□□□□ -0.34
SCARB2-212ENST00000638663 BPY2O14599 106 aa12.88□□□□□ -0.35
SCARB2-212ENST00000638663 FAM236AA0A1B0GUQ0 79 aa12.87□□□□□ -0.35
SCARB2-212ENST00000638663 FAM236BA0A1B0GV22 79 aa12.87□□□□□ -0.35
SCARB2-212ENST00000638663 HRCT1Q6UXD1 115 aa12.87□□□□□ -0.35
SCARB2-212ENST00000638663 A0A087X002 238 aa12.84□□□□□ -0.35
SCARB2-212ENST00000638663 KRTAP1-4P0C5Y4 121 aa12.83□□□□□ -0.36
SCARB2-212ENST00000638663 Q8N9L7 120 aa12.82□□□□□ -0.36
SCARB2-212ENST00000638663 FAM229BQ4G0N7 80 aa12.8□□□□□ -0.36
SCARB2-212ENST00000638663 SPINK6Q6UWN8 80 aa12.8□□□□□ -0.36
SCARB2-212ENST00000638663 DEFB116Q30KQ4 102 aa12.8□□□□□ -0.36
SCARB2-212ENST00000638663 KRTAP13-2Q52LG2 175 aa12.8□□□□□ -0.36
SCARB2-212ENST00000638663 SSBP3-AS1Q7Z2R9 100 aa12.78□□□□□ -0.36
SCARB2-212ENST00000638663 FAT1Q14517 4588 aa12.78□□□□□ -0.36
SCARB2-212ENST00000638663 KRTAP10-4P60372 401 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-212ENST00000638663 PLA2G1BP04054 148 aaKnown RBP12.76□□□□□ -0.37
SCARB2-212ENST00000638663 IGKV4-1P06312 121 aa12.75□□□□□ -0.37
SCARB2-212ENST00000638663 DSCR10P59022 87 aa12.75□□□□□ -0.37
SCARB2-212ENST00000638663 ANAPC13Q9BS18 74 aa12.75□□□□□ -0.37
SCARB2-212ENST00000638663 LINC00472Q9H8W2 130 aa12.73□□□□□ -0.37
SCARB2-212ENST00000638663 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
SCARB2-212ENST00000638663 K7EQZ3 153 aa12.69□□□□□ -0.38
SCARB2-212ENST00000638663 CD164Q04900 197 aa12.68□□□□□ -0.38
SCARB2-212ENST00000638663 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
SCARB2-212ENST00000638663 ATOX1O00244 68 aa12.66□□□□□ -0.38
SCARB2-212ENST00000638663 Q96NJ1 140 aa12.66□□□□□ -0.38
SCARB2-212ENST00000638663 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
SCARB2-212ENST00000638663 TYMSOSQ8TAI1 123 aa12.64□□□□□ -0.39
SCARB2-212ENST00000638663 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
SCARB2-212ENST00000638663 J3KT08 172 aa12.6□□□□□ -0.39
SCARB2-212ENST00000638663 HSPG2P98160 4391 aa12.59□□□□□ -0.39
SCARB2-212ENST00000638663 A8MWP4 228 aa12.58□□□□□ -0.39
SCARB2-212ENST00000638663 Q5VSD8 79 aa12.57□□□□□ -0.4
SCARB2-212ENST00000638663 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
SCARB2-212ENST00000638663 RYR1P21817 5038 aa12.55□□□□□ -0.4
SCARB2-212ENST00000638663 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
SCARB2-212ENST00000638663 EPPK1P58107 5090 aaKnown RBP12.52□□□□□ -0.4
SCARB2-212ENST00000638663 HCG22E2RYF7 251 aa12.52□□□□□ -0.41
SCARB2-212ENST00000638663 NDUFB1O75438 58 aa12.52□□□□□ -0.41
SCARB2-212ENST00000638663 CCDC179H3BU77 68 aa12.5□□□□□ -0.41
SCARB2-212ENST00000638663 ASB16-AS1Q495Z4 193 aa12.5□□□□□ -0.41
SCARB2-212ENST00000638663 SERP2Q8N6R1 65 aa12.5□□□□□ -0.41
SCARB2-212ENST00000638663 Q5XG85 94 aa12.49□□□□□ -0.41
SCARB2-212ENST00000638663 WFDC13Q8IUB5 93 aa12.49□□□□□ -0.41
SCARB2-212ENST00000638663 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
SCARB2-212ENST00000638663 LINC00304Q8N9R0 145 aa12.48□□□□□ -0.41
SCARB2-212ENST00000638663 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
SCARB2-212ENST00000638663 COX7CP15954 63 aa12.47□□□□□ -0.41
SCARB2-212ENST00000638663 LIMD2Q9BT23 127 aa12.47□□□□□ -0.41
SCARB2-212ENST00000638663 SPINK1P00995 79 aa12.46□□□□□ -0.42
SCARB2-212ENST00000638663 PKHD1L1Q86WI1 4243 aa12.45□□□□□ -0.42
SCARB2-212ENST00000638663 SMIM20Q8N5G0 67 aa12.45□□□□□ -0.42
SCARB2-212ENST00000638663 A0A1B0GVX0 72 aa12.44□□□□□ -0.42
SCARB2-212ENST00000638663 TRAV7A0A075B6U4 112 aa12.43□□□□□ -0.42
SCARB2-212ENST00000638663 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
SCARB2-212ENST00000638663 UQCRQO14949 82 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms