RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 CD163L1Q9NR16 1453 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 SCRIBQ14160 1630 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
GYPB-216ENST00000638448 LYNX1G3V0Z9 82 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 ENHOQ6UWT2 76 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 UBL5Q9BZL1 73 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 FASNP49327 2511 aaKnown RBP-0.08□□□□□ -2.42
GYPB-216ENST00000638448 PKD1P98161 4303 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 GPR98Q8WXG9 6306 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 WIZO95785 1651 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 PLCH1Q4KWH8 1693 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 CFAP43Q8NDM7 1665 aa-0.08□□□□□ -2.42
GYPB-216ENST00000638448 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
GYPB-216ENST00000638448 DEPDC5O75140 1603 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 RALGAPBQ86X10 1494 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 RICTORQ6R327 1708 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 PRRC2CQ9Y520 2896 aaKnown RBP-0.09□□□□□ -2.42
GYPB-216ENST00000638448 PLXNC1O60486 1568 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 HFM1A2PYH4 1435 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 DEFB130BP0DP73 79 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 DEFB130AP0DP74 79 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 IAPPP10997 89 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 SPRR2AP35326 72 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 KRTAP6-2Q3LI66 62 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 LYSTQ99698 3801 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 KCNQ1DNQ9H478 68 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 SMCO4Q9NRQ5 59 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 MTORP42345 2549 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 LMTK2Q8IWU2 1503 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 SCN11AQ9UI33 1791 aa-0.09□□□□□ -2.42
GYPB-216ENST00000638448 FLGP20930 4061 aaPredicted RBP-0.09□□□□□ -2.42
GYPB-216ENST00000638448 LRRK2Q5S007 2527 aa-0.1□□□□□ -2.42
GYPB-216ENST00000638448 DDX60LQ5H9U9 1706 aaKnown RBP-0.1□□□□□ -2.42
GYPB-216ENST00000638448 SVEP1Q4LDE5 3571 aa-0.1□□□□□ -2.42
GYPB-216ENST00000638448 ABCA8O94911 1581 aa-0.1□□□□□ -2.42
GYPB-216ENST00000638448 PDCD5O14737 125 aa-0.1□□□□□ -2.43
GYPB-216ENST00000638448 ATXN8Q156A1 80 aa-0.1□□□□□ -2.43
GYPB-216ENST00000638448 HILPDAQ9Y5L2 63 aa-0.1□□□□□ -2.43
GYPB-216ENST00000638448 TGP01266 2768 aa-0.1□□□□□ -2.43
GYPB-216ENST00000638448 TNRC18O15417 2968 aaPredicted RBP-0.1□□□□□ -2.43
GYPB-216ENST00000638448 NF1P21359 2839 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 ACACAQ13085 2346 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 ETDCA0A1B0GVM5 59 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 H3BNG1 76 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 CRIP1P50238 77 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 PRLHP81277 87 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 GNG13Q9P2W3 67 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.11□□□□□ -2.43
GYPB-216ENST00000638448 FSIP2Q5CZC0 6907 aa-0.11□□□□□ -2.43
GYPB-216ENST00000638448 DUOX2Q9NRD8 1548 aa-0.12□□□□□ -2.43
GYPB-216ENST00000638448 FAM186AA6NE01 2351 aa-0.12□□□□□ -2.43
GYPB-216ENST00000638448 DIP2AQ14689 1571 aa-0.12□□□□□ -2.43
GYPB-216ENST00000638448 UGGT2Q9NYU1 1516 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.13□□□□□ -2.43
GYPB-216ENST00000638448 TJP1Q07157 1748 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 PDZD2O15018 2839 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 THOC2Q8NI27 1593 aaKnown RBP-0.13□□□□□ -2.43
GYPB-216ENST00000638448 C9orf92A6NGG3 77 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 SPRR2EP22531 72 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 MXRA5Q9NR99 2828 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 MUC12Q9UKN1 5478 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 ITSN1Q15811 1721 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 MYO5CQ9NQX4 1742 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 PCLOQ9Y6V0 5065 aa-0.13□□□□□ -2.43
GYPB-216ENST00000638448 CUBNO60494 3623 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 CCDC168Q8NDH2 2452 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
GYPB-216ENST00000638448 MINOS1Q5TGZ0 78 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 DEFB106AQ8N104 65 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 IQGAP3Q86VI3 1631 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 FAT3Q8TDW7 4589 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 UTP20O75691 2785 aaKnown RBP-0.14□□□□□ -2.43
GYPB-216ENST00000638448 GCN1Q92616 2671 aaKnown RBP-0.14□□□□□ -2.43
GYPB-216ENST00000638448 NBPF19A0A087WUL8 3843 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 DNAH11Q96DT5 4516 aa-0.14□□□□□ -2.43
GYPB-216ENST00000638448 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 CDC42BPGQ6DT37 1551 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 LRRIQ1Q96JM4 1722 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 DNAH3Q8TD57 4116 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 VPS13BQ7Z7G8 4022 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 DEFB114Q30KQ6 69 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 S4R3F8 94 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 KIAA0586Q9BVV6 1533 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 TEP1Q99973 2627 aaKnown RBP-0.15□□□□□ -2.43
GYPB-216ENST00000638448 ANK3Q12955 4377 aaKnown RBP-0.15□□□□□ -2.43
GYPB-216ENST00000638448 HERC1Q15751 4861 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 ANKRD11Q6UB99 2663 aaPredicted RBP-0.15□□□□□ -2.43
GYPB-216ENST00000638448 DNAH6Q9C0G6 4158 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
GYPB-216ENST00000638448 RIF1Q5UIP0 2472 aaKnown RBP-0.15□□□□□ -2.43
GYPB-216ENST00000638448 RNF17Q9BXT8 1623 aaKnown RBP-0.16□□□□□ -2.43
GYPB-216ENST00000638448 MYO18BQ8IUG5 2567 aa-0.16□□□□□ -2.43
GYPB-216ENST00000638448 ASXL1Q8IXJ9 1541 aa-0.16□□□□□ -2.43
GYPB-216ENST00000638448 ZC3H13Q5T200 1668 aaKnown RBP-0.16□□□□□ -2.44
GYPB-216ENST00000638448 WT1-ASQ06250 92 aa-0.16□□□□□ -2.44
GYPB-216ENST00000638448 NRAPQ86VF7 1730 aa-0.16□□□□□ -2.44
GYPB-216ENST00000638448 APOBP04114 4563 aaKnown RBP-0.16□□□□□ -2.44
GYPB-216ENST00000638448 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms